RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Dhrs13Q5SS80 376 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Zic3Q62521 466 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cldn34c1Q8K193 234 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr470Q8VF65 314 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr736Q8VFT6 312 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gng12Q9DAS9 72 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Mbnl1Q9JKP5 341 aaKnown RBP11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm12728V9GX31 77 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Dcaf10A2AKB9 566 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm6904E9PVF1 202 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr715bE9Q725 315 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Lgals9O08573 353 aaKnown RBP11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cst7O89098 144 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 P01789 122 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Il3raP26952 396 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Rac2Q05144 192 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm10842Q3U587 122 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Znf260Q62513 407 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1371Q7TQT7 311 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Wdr82Q8BFQ4 313 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr346Q8VGJ7 309 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cma2Q91VB1 246 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 AmtnQ9D3J8 213 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 GgctQ9D7X8 188 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Dmxl2Q8BPN8 3032 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Trav6n-7A0A075B6A6 116 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1104A2AVB5 310 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Efnb3O35393 340 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gpr12P35412 334 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Timp3P39876 211 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ankrd33bQ3U0L2 486 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1181Q7TR18 311 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Etfrf1Q91V16 86 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Trav12d-3A0A075B6A4 115 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Slc35d1A2AKQ0 355 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1154L7MU57 310 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Bet1lO35153 111 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 CideaO70302 217 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Neurog3P70661 214 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Taar4Q5QD15 347 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm11232Q5SPI8 295 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 EpcamQ99JW5 315 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Actl6bQ99MR0 426 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Mpdu1Q9R0Q9 247 aa11.11□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ighv8-9A0A0G2JET1 119 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm4884E9PVP9 694 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1116E9PXB8 307 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm6665F6Y363 85 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Bcat2O35855 393 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Pmp2P24526 132 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Col8a2P25318 699 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm10840Q3V2K9 103 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Fbxl7Q5BJ29 491 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ifi27l2bQ8VC49 283 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Btf3l4Q9CQH7 158 aaKnown RBP11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Tnfrsf13cQ9D8D0 175 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Hsbp1l1B2RXB2 72 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gnb4P29387 340 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr143P34985 313 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Fam3dP97805 223 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1474Q7TQQ8 314 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Commd9Q8K2Q0 198 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Rab31Q921E2 194 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Nus1Q99LJ8 297 aa11.1□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ighv5-17A0A075B5R1 117 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Zfp980A2A9J5 645 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm9964E9Q9S5 144 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gabra6P16305 453 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 BsgP18572 389 aaKnown RBP11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cib3Q0P523 160 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Pafah1b2Q61206 229 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1475Q8VEV6 314 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1233Q8VGN0 305 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ppp1r27Q9D119 154 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Eaf1Q9D4C5 268 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 TslpQ9JIE6 140 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Lsm4Q9QXA5 137 aaKnown RBP11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1293-psA0A1L1SVB5 326 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Vmn1r149E9PWL6 307 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Vmn1r101E9Q365 307 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm8882E9Q7E4 283 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm2381G3UY53 305 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Vmn1r158G3UY92 307 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm19345G3UYD9 124 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 P01655 112 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Hoxa3P02831 443 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Lgals3P16110 264 aaKnown RBP11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr15P23275 312 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 A230072I06RikQ3UUJ8 172 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Smim9Q3V0X1 137 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr859Q7TRF5 309 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1457Q8VFK3 317 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Kcnip2Q9JJ69 270 aa11.09□□□□□ -0.63
Nup88-201ENSMUST00000035283 Igkv1-132A0A0B4J1H9 120 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 KalrnA2CG49 2964 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Tmem139E9PX92 214 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 P01787 123 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 F7P70375 446 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Taar9Q5QD04 348 aa11.08□□□□□ -0.64
Nup88-201ENSMUST00000035283 Znf329Q6GQR8 522 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms