RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Opn3Q9WUK7 400 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Tac3P55099 116 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Mbnl2Q8C181 373 aaKnown RBP12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 ClpsQ9CQC2 113 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 PyyQ9EPS2 98 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm45521A0A1B0GRK0 198 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 P01809 118 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Trav15-1-dv6-1Q5R1D2 117 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 RflnbQ5SVD0 216 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Syngr3Q8R191 229 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Cma2Q91VB1 246 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Cep290Q6A078 2472 aa12.02□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Depp1Q8K2F3 205 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ltbp1Q8CG19 1712 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Trbv29A0A0G2LB96 114 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm6970F7DCP6 221 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 P01664 111 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Trav6n-7A0A075B6A6 116 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Igkv4-51A0N8I8 119 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ccl7Q03366 97 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ssbp3Q9D032 388 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Rpl27aP14115 148 aaKnown RBP12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm1673Q3UR78 90 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Tmem189Q99LQ7 271 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Defb21Q8C5Z4 100 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Q8VCE4 163 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 FcrlsQ9EQY5 509 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Wrap73Q9JM98 462 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Trav16A0A075B653 116 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm20696H3BJN7 74 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Foxa3P35584 353 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Cd200r4Q6XJV4 270 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 H2al1oL7MU04 110 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 CxadrP97792 365 aa12.01□□□□□ -0.49
Col5a1-201ENSMUST00000028280 RlfA2A7F4 1918 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Olfr1192-ps1A0A1L1SRD7 309 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm20825J3QM67 227 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ankrd66J3QNN4 192 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 P01808 119 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 SeleQ00690 612 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ssty2Q149W4 227 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Mrgprb2Q3KNA1 338 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Col11a1Q61245 1804 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Dtx1Q61010 627 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Fgf12P61329 243 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Tff3Q62395 81 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ndufb3Q9CQZ6 104 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Scn10aQ6QIY3 1958 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ighv6-4A0A0A6YX19 119 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Foxb2Q64733 428 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Vmn1r197Q8R265 298 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Parp4E9PYK3 1969 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ighv14-3A0A075B5R9 117 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Lhx9Q9WUH2 397 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Rnase9P60154 184 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Rnd2Q9QYM5 227 aa12□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ighv14-2A0A075B5R7 117 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 PilraQ2YFS3 302 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm10118Q8C8J5 116 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Prr30Q9D9B7 401 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Pkd1l3Q2EG98 2201 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Sox15P43267 231 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Vmn1r216Q8R257 298 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Zfand6Q9DCH6 223 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 MalO09198 153 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 P01801 115 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gnb1lQ9EQ15 326 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 P18525 117 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ceacam10Q61400 265 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm9944Q8C559 102 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Unc119Q9Z2R6 240 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 AcacaQ5SWU9 2345 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Mrps18cQ8R2L5 143 aaKnown RBP11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Ifitm2Q99J93 144 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Cacna1gQ5SUF7 2381 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Olfr918E9PVZ7 325 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 P18530 117 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Glrx5Q80Y14 152 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Nabp2Q8R2Y9 212 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Tmem178bM0QWJ9 172 aa11.99□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Trbv17A0A140T8P8 114 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Irf2bp2E9Q1P8 570 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Klk1b21Q61759 261 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Rnf182Q8C432 247 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Lypd2Q9DD23 127 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Olfr779E9PUS9 130 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Cox11Q6P8I6 275 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Acsm5Q8BGA8 578 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Snrnp40Q6PE01 358 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Wdr82Q8BFQ4 313 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 BivmQ8CBX9 502 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Eda2rQ8BX35 297 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm13199Q8C8E0 125 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Dkk2Q9QYZ8 259 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 H2-Ab1P01921 265 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Olfr1323Q8VF35 309 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Hcfc1r1Q9CYQ5 120 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Gm35549A0A0N4SUS7 141 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Lax1Q8BHB3 407 aa11.98□□□□□ -0.49
Col5a1-201ENSMUST00000028280 Itgb1bp1O35671 200 aa11.98□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 54.1 ms