RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 A0A0U1RQV1 116 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 FAM240AA0A1B0GVK7 77 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 LINC01356Q8N9X3 169 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 ZNRF2Q8NHG8 242 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 HERV-K104P63124 156 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 IGKV2D-24A0A075B6R9 120 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 IGLL5B9A064 214 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 FOXE3Q13461 319 aa10.62□□□□□ -0.71
UBE3A-228ENST00000638155 MRPL35Q9NZE8 188 aaKnown RBP10.62□□□□□ -0.71
UBE3A-228ENST00000638155 IGHV3-38A0A0C4DH36 116 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 ZNF883P0CG24 379 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 CFC1BP0CG36 223 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 CFC1P0CG37 223 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 C10orf55Q5SWW7 151 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 BUB1B-PAK6H3BSN5 160 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 DYNAPQ8N1N2 210 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 NAV3Q8IVL0 2385 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 MRPS18CQ9Y3D5 142 aaKnown RBP10.61□□□□□ -0.71
UBE3A-228ENST00000638155 ICOSQ9Y6W8 199 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 TRAV3A0A0B4J244 114 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 TMEM14EPQ6UXP3 125 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 IGF2BP2-AS1Q96M15 143 aa10.61□□□□□ -0.71
UBE3A-228ENST00000638155 H0Y9J4 135 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 NDUFB8O95169 186 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 DEFB131AP59861 70 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 OPRPNQ99935 248 aaPredicted RBP10.6□□□□□ -0.71
UBE3A-228ENST00000638155 BUB3O43684 328 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 IGKV1-39P01597 117 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 IGKV1D-39P04432 117 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 ATP5G1P05496 136 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 ZNF134P52741 427 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 CFHR1Q03591 330 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 TFF1P04155 84 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 CRYGBP07316 175 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 PAX9P55771 341 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 NHSL1Q5SYE7 1610 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 WISP3O95389 354 aaPredicted RBP10.6□□□□□ -0.71
UBE3A-228ENST00000638155 H0YGX0 51 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 Q9H8V8 135 aa10.6□□□□□ -0.71
UBE3A-228ENST00000638155 SPANXB1Q9NS25 103 aaPredicted RBP10.6□□□□□ -0.71
UBE3A-228ENST00000638155 CR1LQ2VPA4 569 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 SIGLEC8Q9NYZ4 499 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 MRPL36Q9P0J6 103 aaKnown RBP10.59□□□□□ -0.71
UBE3A-228ENST00000638155 E9PLN8 166 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 CCL25O15444 150 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 SIGLEC9Q9Y336 463 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 ANAPC1Q9H1A4 1944 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 BRWD3Q6RI45 1802 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 IGKV1D-43A0A0B4J1Z2 117 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 C9JQL5 133 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 NTF4P34130 210 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 Q6ZWC4 215 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 WFDC11Q8NEX6 87 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 SMIM27A0A1W2PRY6 76 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 SHISA3A0PJX4 238 aa10.59□□□□□ -0.71
UBE3A-228ENST00000638155 IGLV3-21P80748 117 aaPredicted RBP10.58□□□□□ -0.72
UBE3A-228ENST00000638155 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
UBE3A-228ENST00000638155 SPACA3Q8IXA5 215 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 C9orf106Q8NAJ2 232 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 C3orf22Q8N5N4 141 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 GLI3P10071 1580 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 SIPA1L1O43166 1804 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 IGHV4OR15-8A0A075B7B6 117 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 A0A087WW49 117 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 LYNX1G3V0Z9 82 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 IGHV2-70P01814 119 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 LYNX1P0DP58 116 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 TET2Q6N021 2002 aaPredicted RBP10.58□□□□□ -0.72
UBE3A-228ENST00000638155 A0A1B0GUS0 222 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 C4orf51C9J302 202 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 IGHV1-46P01743 117 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 PLXNA3P51805 1871 aa10.58□□□□□ -0.72
UBE3A-228ENST00000638155 UBE2AP49459 152 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 REG4Q9BYZ8 158 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 USP17L23D6RBM5 183 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 TRBV12-3P01733 135 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 LYZL4Q96KX0 146 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 LINC01619G3V211 115 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 CXCL5P42830 114 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 RHOHQ15669 191 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 FGFBP3Q8TAT2 258 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 WIPF2Q8TF74 440 aaPredicted RBP10.57□□□□□ -0.72
UBE3A-228ENST00000638155 C20orf78Q9BR46 151 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 K7EMI3 77 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 IGLL1P15814 213 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 IGKV1OR2-108A0A075B7D4 117 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 OVOL3O00110 214 aa10.57□□□□□ -0.72
UBE3A-228ENST00000638155 IGHV1-18A0A0C4DH31 117 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 LINC00479Q96M42 142 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.56□□□□□ -0.72
UBE3A-228ENST00000638155 TRAV4A0A0B4J268 109 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 CYTL1Q9NRR1 136 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 NDUFC2-KCTD14E9PQ53 114 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 SMIM10L1P0DMW3 83 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 SMIM10Q96HG1 83 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 VWA8A3KMH1 1905 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 DKK2Q9UBU2 259 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 TRBV19A0A075B6N1 114 aa10.56□□□□□ -0.72
UBE3A-228ENST00000638155 LTAP01374 205 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms