RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 OCMP0CE72 109 aaPredicted RBP-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 COX4I1P13073 169 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 PSMB6P28072 239 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 TMBIM6P55061 237 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 ARPP19P56211 112 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 TAS2R41P59536 307 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 HIST3H3Q16695 136 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 FAM216BQ8N7L0 139 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 CIB3Q96Q77 187 aaPredicted RBP-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 TPRKBQ9Y3C4 175 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 LAMA2P24043 3122 aaKnown RBP-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 KIAA1549LQ6ZVL6 1849 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 PLXNA1Q9UIW2 1896 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 IQSEC2Q5JU85 1478 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 FXYD6-FXYD2A0A087WZ82 144 aa-2.27□□□□□ -2.77
SCN1A-215ENST00000637285 CHP2O43745 196 aa-2.27□□□□□ -2.77
SCN1A-215ENST00000637285 ATP5HO75947 161 aa-2.27□□□□□ -2.77
SCN1A-215ENST00000637285 CXCL1P09341 107 aa-2.27□□□□□ -2.77
SCN1A-215ENST00000637285 CAPZBP47756 277 aa-2.27□□□□□ -2.77
SCN1A-215ENST00000637285 MYL6P60660 151 aa-2.27□□□□□ -2.77
SCN1A-215ENST00000637285 C8orf76Q96K31 380 aa-2.27□□□□□ -2.77
SCN1A-215ENST00000637285 RNASE7Q9H1E1 156 aaKnown RBP-2.27□□□□□ -2.77
SCN1A-215ENST00000637285 TRAV4A0A0B4J268 109 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 TEX49A0A1B0GTD5 131 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 LRRN3E7EW58 273 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 DCTN3O75935 186 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 ACYP2P14621 99 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 SDC4P31431 198 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 UBE2G2P60604 165 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 OR2F1Q13607 317 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 IAH1Q2TAA2 248 aaPredicted RBP-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 CLEC6AQ6EIG7 209 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 IFT20Q8IY31 132 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 OR5AK2Q8NH90 309 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 ASB4Q9Y574 426 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 NISCHQ9Y2I1 1504 aa-2.28□□□□□ -2.77
SCN1A-215ENST00000637285 TMEM14DPA8MWL7 114 aa-2.29□□□□□ -2.78
SCN1A-215ENST00000637285 CST7O76096 145 aa-2.29□□□□□ -2.78
SCN1A-215ENST00000637285 NFYBP25208 207 aa-2.29□□□□□ -2.78
SCN1A-215ENST00000637285 OR4B1Q8NGF8 309 aa-2.29□□□□□ -2.78
SCN1A-215ENST00000637285 OR8J3Q8NGG0 315 aa-2.29□□□□□ -2.78
SCN1A-215ENST00000637285 IMP3Q9NV31 184 aaKnown RBP-2.29□□□□□ -2.78
SCN1A-215ENST00000637285 SPCS1Q9Y6A9 102 aa-2.29□□□□□ -2.78
SCN1A-215ENST00000637285 PKHD1L1Q86WI1 4243 aa-2.29□□□□□ -2.78
SCN1A-215ENST00000637285 TEP1Q99973 2627 aaKnown RBP-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 NINQ8N4C6 2090 aa-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 TRPM1Q7Z4N2 1603 aa-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 C9orf84Q5VXU9 1444 aa-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 FGD6Q6ZV73 1430 aa-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 BCL2P10415 239 aa-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 HAMPP81172 84 aa-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 INSL4Q14641 139 aa-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 POU6F1Q14863 301 aa-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 FAM151BQ6UXP7 276 aa-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 BORCS7Q96B45 105 aa-2.3□□□□□ -2.78
SCN1A-215ENST00000637285 TRBV19A0A075B6N1 114 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 TRAV5A0A0B4J249 113 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 RBAKDNA6NC62 111 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 CDC42EP2O14613 210 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 HIST1H2BKO60814 126 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 TRACP01848 142 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 HIST1H2BJP06899 126 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 OCM2P0CE71 109 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 MED21Q13503 144 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 RHOHQ15669 191 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 AKIRIN2Q53H80 203 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 OR5A2Q8NGI9 324 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 BATF3Q9NR55 127 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 SLC22A13Q9Y226 551 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 SPTBN4Q9H254 2564 aa-2.31□□□□□ -2.78
SCN1A-215ENST00000637285 KIF1BO60333 1816 aa-2.32□□□□□ -2.78
SCN1A-215ENST00000637285 TRBV7-1A0A0A6YYK4 115 aa-2.32□□□□□ -2.78
SCN1A-215ENST00000637285 ERP29P30040 261 aaKnown RBP-2.32□□□□□ -2.78
SCN1A-215ENST00000637285 OMPP47874 163 aa-2.32□□□□□ -2.78
SCN1A-215ENST00000637285 DNAJB13P59910 316 aa-2.32□□□□□ -2.78
SCN1A-215ENST00000637285 FADDQ13158 208 aa-2.32□□□□□ -2.78
SCN1A-215ENST00000637285 DNAH3Q8TD57 4116 aa-2.32□□□□□ -2.78
SCN1A-215ENST00000637285 BICRAQ9NZM4 1560 aa-2.32□□□□□ -2.78
SCN1A-215ENST00000637285 APOC4-APOC2K7ER74 178 aa-2.33□□□□□ -2.78
SCN1A-215ENST00000637285 PDE6DO43924 150 aa-2.33□□□□□ -2.78
SCN1A-215ENST00000637285 SERPINA1P01009 418 aa-2.33□□□□□ -2.78
SCN1A-215ENST00000637285 APOC1P02654 83 aa-2.33□□□□□ -2.78
SCN1A-215ENST00000637285 TPM2P07951 284 aa-2.33□□□□□ -2.78
SCN1A-215ENST00000637285 HIST1H1EP10412 219 aaKnown RBP-2.33□□□□□ -2.78
SCN1A-215ENST00000637285 FABP4P15090 132 aa-2.33□□□□□ -2.78
SCN1A-215ENST00000637285 C19orf12Q9NSK7 152 aa-2.33□□□□□ -2.78
SCN1A-215ENST00000637285 TNRC18O15417 2968 aaPredicted RBP-2.33□□□□□ -2.78
SCN1A-215ENST00000637285 SPG11Q96JI7 2443 aa-2.33□□□□□ -2.78
SCN1A-215ENST00000637285 ADGRL3Q9HAR2 1447 aa-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 DNAJC13O75165 2243 aa-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 TRBV10-3A0A0K0K1G6 114 aa-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 LOC107984640A0A0U1RRK4 108 aa-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 TMEM189A5PLL7 270 aa-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 G3V318 75 aa-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 IFNA7P01567 189 aa-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 MT-ND6P03923 174 aa-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 CALB1P05937 261 aa-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 S100A9P06702 114 aaKnown RBP-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 NDUFA6P56556 154 aa-2.34□□□□□ -2.78
SCN1A-215ENST00000637285 MSMO1Q15800 293 aa-2.34□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms