RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	RASL11A	Q6T310	242 aa		11.95	□□□□□ -0.5
CACNA1A-231	ENST00000636816	OR1N2	Q8NGR9	330 aa		11.95	□□□□□ -0.5
CACNA1A-231	ENST00000636816	LINC01006	Q8NI28	216 aa		11.95	□□□□□ -0.5
CACNA1A-231	ENST00000636816	TPPP3	Q9BW30	176 aa		11.95	□□□□□ -0.5
CACNA1A-231	ENST00000636816	TP53TG3	Q9ULZ0	132 aa		11.95	□□□□□ -0.5
CACNA1A-231	ENST00000636816	FABP5P3	A8MUU1	101 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	ARMS2	P0C7Q2	107 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	S100A2	P29034	98 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	BMI1	P35226	326 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	ATP5L2	Q7Z4Y8	100 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	ZNF418	Q8TF45	676 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	NIT2	Q9NQR4	276 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	HAX1	O00165	279 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	OVOL1	O14753	267 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	ORM1	P02763	201 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	CRISP2	P16562	243 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	HILS1	P60008	231 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	SST	P61278	116 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	HBB	P68871	147 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	PRR9	Q5T870	116 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	DPF1	Q92782	380 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	C11orf21	Q9P2W6	132 aa		11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNA1A-231	ENST00000636816	SORL1	Q92673	2214 aa		11.93	□□□□□ -0.5
CACNA1A-231	ENST00000636816	MUC21	A0A0G2JKD1	596 aa		11.93	□□□□□ -0.5
CACNA1A-231	ENST00000636816	MUC21	A0A140T8X8	626 aa		11.93	□□□□□ -0.5
CACNA1A-231	ENST00000636816		A0A1W2PRX2	142 aa		11.93	□□□□□ -0.5
CACNA1A-231	ENST00000636816		J3KRW8	73 aa		11.93	□□□□□ -0.5
CACNA1A-231	ENST00000636816	FABP4	P15090	132 aa		11.93	□□□□□ -0.5
CACNA1A-231	ENST00000636816	HIST1H1A	Q02539	215 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNA1A-231	ENST00000636816	MUC21	Q5SSG8	566 aa		11.93	□□□□□ -0.5
CACNA1A-231	ENST00000636816	OR10J6P	Q8NGY7	276 aa		11.93	□□□□□ -0.5
CACNA1A-231	ENST00000636816	DLX4	Q92988	240 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNA1A-231	ENST00000636816	SRSF2	Q01130	221 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	SCGB2A2	Q13296	93 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	LYZL1	Q6UWQ5	148 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	OR8A1	Q8NGG7	326 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	HIST1H2BL	Q99880	126 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	C16orf95	Q9H693	158 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	PPP1R14D	Q9NXH3	145 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	SRI	P30626	198 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	LINC00310	P59036	64 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	OR10D4P	Q8NGN7	298 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	LINC00477	Q96M19	166 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	GSN-AS1	Q9NRJ2	163 aa		11.92	□□□□□ -0.5
CACNA1A-231	ENST00000636816	IGKV3D-20	A0A0C4DH25	116 aa		11.91	□□□□□ -0.5
CACNA1A-231	ENST00000636816		A0A1B0GUT8	65 aa		11.91	□□□□□ -0.5
CACNA1A-231	ENST00000636816	ZNF688	P0C7X2	276 aa		11.91	□□□□□ -0.5
CACNA1A-231	ENST00000636816	INAFM1	C9JVW0	142 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816		K7EQG2	157 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	AMBP	P02760	352 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	ID1	P41134	155 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	KIR3DS1	Q14943	382 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	DNLZ	Q5SXM8	178 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	ZFAND2A	Q8N6M9	145 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	RAX2	Q96IS3	184 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	CITED2	Q99967	270 aa	Predicted RBP	11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	CD33	P20138	364 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	PYY3	Q5JQD4	70 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	OR9G4	Q8NGQ1	327 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	WFDC12	Q8WWY7	111 aa		11.9	□□□□□ -0.5
CACNA1A-231	ENST00000636816	AGRN	O00468	2067 aa		11.89	□□□□□ -0.51
CACNA1A-231	ENST00000636816	LINC01559	Q495D7	138 aa		11.89	□□□□□ -0.51
CACNA1A-231	ENST00000636816	PSMG4	Q5JS54	123 aa		11.89	□□□□□ -0.51
CACNA1A-231	ENST00000636816	FAM19A4	Q96LR4	140 aa		11.89	□□□□□ -0.51
CACNA1A-231	ENST00000636816	WNK1	Q9H4A3	2382 aa		11.89	□□□□□ -0.51
CACNA1A-231	ENST00000636816	SERF1A	O75920	110 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	IGLC6	P0CF74	106 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	CTAG1A	P78358	180 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816		Q0VG73	95 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	HIVEP1	P15822	2718 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	CSN3	P07498	182 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	RPS20	P60866	119 aa	Known RBP	11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	RIG	Q13278	110 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	IQCJ	Q1A5X6	159 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	BAGE3	Q86Y29	109 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	FER1L6-AS1	Q8NA97	138 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	LENEP	Q9Y5L5	61 aa		11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816	SETX	Q7Z333	2677 aa	Known RBP	11.88	□□□□□ -0.51
CACNA1A-231	ENST00000636816		M0QZ24	198 aa		11.87	□□□□□ -0.51
CACNA1A-231	ENST00000636816		Q6AWC8	147 aa		11.87	□□□□□ -0.51
CACNA1A-231	ENST00000636816	PACRG	Q96M98	296 aa	Predicted RBP	11.87	□□□□□ -0.51
CACNA1A-231	ENST00000636816	RCHY1	Q96PM5	261 aa		11.87	□□□□□ -0.51
CACNA1A-231	ENST00000636816	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.87	□□□□□ -0.51
CACNA1A-231	ENST00000636816		A6NJY4	79 aa		11.87	□□□□□ -0.51
CACNA1A-231	ENST00000636816	RNASE4	P34096	147 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1A-231	ENST00000636816	PEMT	Q9UBM1	199 aa		11.87	□□□□□ -0.51
CACNA1A-231	ENST00000636816	GPX1	P07203	203 aa		11.86	□□□□□ -0.51
CACNA1A-231	ENST00000636816	SAMD13	Q5VXD3	122 aa		11.86	□□□□□ -0.51
CACNA1A-231	ENST00000636816	C18orf32	Q8TCD1	76 aa		11.86	□□□□□ -0.51
CACNA1A-231	ENST00000636816	MSRB1	Q9NZV6	116 aa		11.86	□□□□□ -0.51
CACNA1A-231	ENST00000636816	RNF114	Q9Y508	228 aa		11.86	□□□□□ -0.51
CACNA1A-231	ENST00000636816	CCL24	O00175	119 aa		11.85	□□□□□ -0.51
CACNA1A-231	ENST00000636816	IGKV3-20	P01619	116 aa		11.85	□□□□□ -0.51
CACNA1A-231	ENST00000636816	CTRL	P40313	264 aa		11.85	□□□□□ -0.51
CACNA1A-231	ENST00000636816	OR10J3	Q5JRS4	329 aa		11.85	□□□□□ -0.51
CACNA1A-231	ENST00000636816	BORCS7	Q96B45	105 aa		11.85	□□□□□ -0.51
CACNA1A-231	ENST00000636816	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.85	□□□□□ -0.51
CACNA1A-231	ENST00000636816	NTF3	P20783	257 aa		11.85	□□□□□ -0.51
CACNA1A-231	ENST00000636816	SNRPD3	P62318	126 aa	Known RBP	11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms