RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 KIR2DL5AQ8N109 375 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 Q8NAQ8 132 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 KIR2DL5BQ8NHK3 375 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 NAGKQ9UJ70 344 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 GNRH2O43555 120 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 DUSP14O95147 198 aaKnown RBP6.13□□□□□ -1.43
CDKL5-209ENST00000635828 BLOC1S1P78537 153 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 SAMD13Q5VXD3 122 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 MUC4Q99102 2169 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 PLAC8L1A1L4L8 177 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 RPL19P84098 196 aaKnown RBP6.13□□□□□ -1.43
CDKL5-209ENST00000635828 OR5I1Q13606 314 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 IGF2BP2-AS1Q96M15 143 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 LINC00477Q96M19 166 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 GCGP01275 180 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 IGLV2-8P01709 118 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 NUTF2P61970 127 aaKnown RBP6.12□□□□□ -1.43
CDKL5-209ENST00000635828 PRR27Q6MZM9 219 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 LINC01587Q99440 93 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 TMEM208Q9BTX3 173 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 VAX2Q9UIW0 290 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 NACAE9PAV3 2078 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 HBE1P02100 147 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 SPATA25Q9BR10 227 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 MANBALQ9NQG1 85 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 MED9Q9NWA0 146 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 MDFICQ9P1T7 246 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 RBAKDNA6NC62 111 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 PCP4L1A6NKN8 68 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 M0R036 132 aa6.12□□□□□ -1.43
CDKL5-209ENST00000635828 TMSB15BA0A087X1C1 80 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 C7orf71A4D174 169 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 K7EN84 100 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 CRISP2P16562 243 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 AKR1C3P42330 323 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 CENPWQ5EE01 88 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 MORN3Q6PF18 240 aaPredicted RBP6.11□□□□□ -1.43
CDKL5-209ENST00000635828 KLF12Q9Y4X4 402 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 INSP01308 110 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 LTAP01374 205 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 ZNF506Q5JVG8 444 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 HIST1H2BAQ96A08 127 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 PARLQ9H300 379 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 ZMAT4Q9H898 229 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 U3KQK5 164 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 UBE2G1P62253 170 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 TMEM183BQ1AE95 376 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 CLUHP3Q96NS8 147 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 EDA2RQ9HAV5 297 aa6.11□□□□□ -1.43
CDKL5-209ENST00000635828 IGKV3D-20A0A0C4DH25 116 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 MUC21A0A0G2JKD1 596 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 MUC21A0A140T8X8 626 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 SRP19P09132 144 aaKnown RBP6.1□□□□□ -1.43
CDKL5-209ENST00000635828 NANOS2P60321 138 aaKnown RBP6.1□□□□□ -1.43
CDKL5-209ENST00000635828 SSTP61278 116 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 ANXA2RQ3ZCQ2 193 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 RYR3Q15413 4870 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 PPT1P50897 306 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 GSN-AS1Q9NRJ2 163 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 GZMBP10144 247 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 BAGE2Q86Y30 109 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 C11orf52Q96A22 123 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 SACSQ9NZJ4 4579 aa6.1□□□□□ -1.43
CDKL5-209ENST00000635828 GRIFINA4D1Z8 144 aa6.09□□□□□ -1.43
CDKL5-209ENST00000635828 OCC1Q8TAD7 63 aa6.09□□□□□ -1.43
CDKL5-209ENST00000635828 RNASE8Q8TDE3 154 aaKnown RBP6.09□□□□□ -1.43
CDKL5-209ENST00000635828 TIMM8BQ9Y5J9 83 aaPredicted RBP6.09□□□□□ -1.43
CDKL5-209ENST00000635828 UBE2CO00762 179 aa6.09□□□□□ -1.43
CDKL5-209ENST00000635828 MGST1P10620 155 aaKnown RBP6.09□□□□□ -1.43
CDKL5-209ENST00000635828 LEPP41159 167 aa6.09□□□□□ -1.43
CDKL5-209ENST00000635828 PMS2P11Q13670 270 aa6.09□□□□□ -1.43
CDKL5-209ENST00000635828 CLLU1Q5K131 121 aa6.09□□□□□ -1.43
CDKL5-209ENST00000635828 FMC1Q96HJ9 113 aa6.09□□□□□ -1.43
CDKL5-209ENST00000635828 NKX6-2Q9C056 277 aaPredicted RBP6.09□□□□□ -1.43
CDKL5-209ENST00000635828 RNASE7Q9H1E1 156 aaKnown RBP6.09□□□□□ -1.43
CDKL5-209ENST00000635828 NOP10Q9NPE3 64 aaKnown RBP6.09□□□□□ -1.43
CDKL5-209ENST00000635828 SH2D1AO60880 128 aa6.09□□□□□ -1.44
CDKL5-209ENST00000635828 Q6AWC8 147 aa6.09□□□□□ -1.44
CDKL5-209ENST00000635828 TMEM183AQ8IXX5 376 aa6.09□□□□□ -1.44
CDKL5-209ENST00000635828 C11orf72Q8NBR9 251 aa6.09□□□□□ -1.44
CDKL5-209ENST00000635828 FRAS1Q86XX4 4008 aa6.09□□□□□ -1.44
CDKL5-209ENST00000635828 CBY3A6NI87 242 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.08□□□□□ -1.44
CDKL5-209ENST00000635828 C1QTNF4Q9BXJ3 329 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 A6NJY4 79 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 K7EQM0 130 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 TYMSP04818 313 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 ADCYAP1P18509 176 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 FAM222AQ5U5X8 452 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 ZFAND6Q6FIF0 208 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 ODF3Q96PU9 254 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 NIPSNAP3BQ9BS92 247 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 RGS13O14921 159 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 PDE6DO43924 150 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 IFNA1P01562 189 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 PFN1P07737 140 aaKnown RBP6.08□□□□□ -1.44
CDKL5-209ENST00000635828 GOLT1BQ9Y3E0 138 aa6.08□□□□□ -1.44
CDKL5-209ENST00000635828 DEFB130BP0DP73 79 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms