RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 FAM19A3Q7Z5A8 133 aa3.06□□□□□ -1.92
R3HDM1-220ENST00000628915 NFE4Q86UQ8 179 aa3.06□□□□□ -1.92
R3HDM1-220ENST00000628915 C1orf158Q8N1D5 194 aa3.06□□□□□ -1.92
R3HDM1-220ENST00000628915 IGKV1-8A0A0C4DH67 115 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 TRBV27A0A0K0K1C4 114 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 MYMXA0A1B0GTQ4 84 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 SRRM4A7MD48 611 aaKnown RBP3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 WT1P19544 449 aaPredicted RBP3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 NPPCP23582 126 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 DPTQ07507 201 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 C19orf54Q5BKX5 351 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 SPANXN5Q5MJ07 72 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 C17orf77Q96MU5 243 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 COL12A1Q99715 3063 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 ANAPC1Q9H1A4 1944 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 PHF3Q92576 2039 aaKnown RBP3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 IZUMO1RA6ND01 250 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 GP1BBP13224 206 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 UBE2AP49459 152 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 DEFB134Q4QY38 66 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 Q8N1Y9 231 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 ZNF799Q96GE5 643 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 SLC25A2Q9BXI2 301 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 FAM60AQ9NP50 221 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 ADGRG4Q8IZF6 3080 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 HEATR5BQ9P2D3 2071 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 WI2-2373I1.2A0A1W2PRP0 233 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 LINC01549A6NIU2 74 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 IAPPP10997 89 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 ATXN8Q156A1 80 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 PRR15Q8IV56 129 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 C20orf197Q8N268 126 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 ZNF645Q8N7E2 425 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 DCANP1Q8TF63 244 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 V9GYV3 84 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 FANCMQ8IYD8 2048 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 CABIN1Q9Y6J0 2220 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 A0A0G2JNJ9 132 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 TCRBV4S1A1TA0A5B7 111 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 K7ENP7 123 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 IGKV1D-33P01593 117 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 IGKV1-33P01594 117 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 ATP5EP56381 51 aaPredicted RBP3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 HIST1H4AP62805 103 aaKnown RBP3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 ERCC8Q13216 396 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 RSPO4Q2I0M5 234 aaPredicted RBP3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 Q9UFV3 132 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 LHFPL6Q9Y693 200 aa3.05□□□□□ -1.92
R3HDM1-220ENST00000628915 CELSR2Q9HCU4 2923 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 LOC101059948A0A1B0GTJ6 334 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 IGHV4-39P01824 125 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 CD52P31358 61 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 ATP1A1-AS1Q5TC04 95 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 C2orf91Q6ZV80 131 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 C11orf52Q96A22 123 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 VWA8A3KMH1 1905 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 PRR14LQ5THK1 2151 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 NCOR1O75376 2440 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 TRBV7-7A0A0K0K1E9 115 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 HBDP02042 147 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 NANOS2P60321 138 aaKnown RBP3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 TNP2Q05952 138 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 PCP2Q8IVA1 136 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 C11orf53Q8IXP5 236 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 FGFBP3Q8TAT2 258 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 SLC50A1Q9BRV3 221 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 DEFB127Q9H1M4 99 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 X6R8D5 127 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 SMIM27A0A1W2PRY6 76 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 DSCR4P56555 118 aaPredicted RBP3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 REG3AQ06141 175 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 RUSC1-AS1Q66K80 236 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 SOSTDC1Q6X4U4 206 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 LCA10Q71F78 164 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 TOMM6Q96B49 74 aa3.04□□□□□ -1.92
R3HDM1-220ENST00000628915 IGKV1-9A0A0C4DH69 117 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 SCO2A0A1W2PP80 73 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 C17orf51A8MQB3 221 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 TFF1P04155 84 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 SPRNQ5BIV9 151 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 FAM104BQ5XKR9 115 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 ZNF818PQ6ZRF7 136 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 Q6ZVQ6 151 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 VN1R4Q7Z5H5 301 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 SPACA3Q8IXA5 215 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 LINC01356Q8N9X3 169 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 Q9Y3F1 56 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 SLC25A15Q9Y619 301 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 IGHV1-45A0A0A0MS14 117 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 C12orf77C9JDV5 145 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 TMEM30BQ3MIR4 351 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 ZNF876PQ49A33 203 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 NACAE9PAV3 2078 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 KNL1Q8NG31 2342 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 K7EM74 188 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 PEX7O00628 323 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 MYCNOSP40205 109 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 Q6ZRU5 148 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 DYNLRB2Q8TF09 96 aa3.03□□□□□ -1.92
R3HDM1-220ENST00000628915 IGHV3OR15-7A0A075B7D8 119 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms