RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 NPIPB3Q92617 1050 aa12.44□□□□□ -0.42
SEMA3B-214ENST00000619119 FCN3O75636 299 aa12.44□□□□□ -0.42
SEMA3B-214ENST00000619119 IFITM1P13164 125 aa12.44□□□□□ -0.42
SEMA3B-214ENST00000619119 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEMA3B-214ENST00000619119 GOLT1AQ6ZVE7 132 aa12.44□□□□□ -0.42
SEMA3B-214ENST00000619119 Q9H3A6 140 aa12.44□□□□□ -0.42
SEMA3B-214ENST00000619119 HOXA3O43365 443 aaPredicted RBP12.43□□□□□ -0.42
SEMA3B-214ENST00000619119 RNASE2P10153 161 aaKnown RBP12.43□□□□□ -0.42
SEMA3B-214ENST00000619119 ABCA1O95477 2261 aa12.43□□□□□ -0.42
SEMA3B-214ENST00000619119 TMEM8BA6NDV4 472 aa12.43□□□□□ -0.42
SEMA3B-214ENST00000619119 CRLF1O75462 422 aa12.43□□□□□ -0.42
SEMA3B-214ENST00000619119 SRD5A1P18405 259 aa12.43□□□□□ -0.42
SEMA3B-214ENST00000619119 MEIG1Q5JSS6 88 aa12.43□□□□□ -0.42
SEMA3B-214ENST00000619119 MAP1LC3AQ9H492 121 aa12.43□□□□□ -0.42
SEMA3B-214ENST00000619119 NAV3Q8IVL0 2385 aa12.43□□□□□ -0.42
SEMA3B-214ENST00000619119 CACNA1AO00555 2505 aa12.43□□□□□ -0.42
SEMA3B-214ENST00000619119 LINC01549A6NIU2 74 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 LY6HO94772 140 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 PRB3Q04118 309 aaPredicted RBP12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 C8orf46Q8TAG6 207 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 HRNRQ86YZ3 2850 aaPredicted RBP12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 TRAV40A0A0B4J280 105 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 PRCDQ00LT1 54 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 ASH1LQ9NR48 2969 aaKnown RBP12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 MALRD1Q5VYJ5 2156 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 DPM2O94777 84 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 LEPP41159 167 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 ANKRD29Q8N6D5 301 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 PIFOQ8TCI5 191 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 RAB1BQ9H0U4 201 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 RAB9BQ9NP90 201 aa12.42□□□□□ -0.42
SEMA3B-214ENST00000619119 MED13LQ71F56 2210 aa12.41□□□□□ -0.42
SEMA3B-214ENST00000619119 CKS2P33552 79 aa12.41□□□□□ -0.42
SEMA3B-214ENST00000619119 MRPL51Q4U2R6 128 aaKnown RBP12.41□□□□□ -0.42
SEMA3B-214ENST00000619119 SVEP1Q4LDE5 3571 aa12.41□□□□□ -0.42
SEMA3B-214ENST00000619119 TAL2Q16559 108 aa12.41□□□□□ -0.42
SEMA3B-214ENST00000619119 CTSZQ9UBR2 303 aa12.41□□□□□ -0.42
SEMA3B-214ENST00000619119 TRAV8-2A0A0B4J237 113 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 DLX1P56177 255 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 C2orf83Q53S99 150 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 TRBV7-3A0A075B6L6 115 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 NDUFB3O43676 98 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 PAX8Q06710 450 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 FAM104BQ5XKR9 115 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 TMEM200BQ69YZ2 307 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 Q6ZQT7 251 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 TMEM158Q8WZ71 300 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 A8MWV9 139 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 TMEM262E9PQX1 116 aa12.4□□□□□ -0.42
SEMA3B-214ENST00000619119 CENPVL3A0A0U1RRI6 287 aa12.39□□□□□ -0.43
SEMA3B-214ENST00000619119 FSTL3O95633 263 aa12.39□□□□□ -0.43
SEMA3B-214ENST00000619119 KIR2DS2P43631 304 aa12.39□□□□□ -0.43
SEMA3B-214ENST00000619119 PPP1R27Q86WC6 154 aa12.39□□□□□ -0.43
SEMA3B-214ENST00000619119 EXOC3-AS1Q8N2X6 119 aa12.39□□□□□ -0.43
SEMA3B-214ENST00000619119 TMEM133Q9H2Q1 129 aa12.39□□□□□ -0.43
SEMA3B-214ENST00000619119 VCX2Q9H322 139 aa12.39□□□□□ -0.43
SEMA3B-214ENST00000619119 MRPL35Q9NZE8 188 aaKnown RBP12.39□□□□□ -0.43
SEMA3B-214ENST00000619119 MRPL36Q9P0J6 103 aaKnown RBP12.39□□□□□ -0.43
SEMA3B-214ENST00000619119 TWIST1Q15672 202 aa12.38□□□□□ -0.43
SEMA3B-214ENST00000619119 LYZL1Q6UWQ5 148 aa12.38□□□□□ -0.43
SEMA3B-214ENST00000619119 RPEQ96AT9 228 aa12.38□□□□□ -0.43
SEMA3B-214ENST00000619119 ZMAT4Q9H898 229 aa12.38□□□□□ -0.43
SEMA3B-214ENST00000619119 RPUSD1Q9UJJ7 312 aaKnown RBP12.38□□□□□ -0.43
SEMA3B-214ENST00000619119 ZNF785A8K8V0 405 aa12.38□□□□□ -0.43
SEMA3B-214ENST00000619119 RITA1Q96K30 269 aa12.38□□□□□ -0.43
SEMA3B-214ENST00000619119 CACNA1BQ00975 2339 aa12.38□□□□□ -0.43
SEMA3B-214ENST00000619119 NDUFA3O95167 84 aa12.37□□□□□ -0.43
SEMA3B-214ENST00000619119 IGKV1-16P04430 117 aa12.37□□□□□ -0.43
SEMA3B-214ENST00000619119 FBXL19-AS1Q494R0 122 aa12.37□□□□□ -0.43
SEMA3B-214ENST00000619119 UPK2O00526 184 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 GATD1Q8NB37 220 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 RASL11BQ9BPW5 248 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 PRORYQ9H606 182 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 ZFYVE26Q68DK2 2539 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 CFAP46Q8IYW2 2715 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 TCL1BO95988 128 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 ZNF672Q499Z4 452 aaPredicted RBP12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 PSMG4Q5JS54 123 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 OR1L8Q8NGR8 309 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 U3KQK5 164 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 IGKV1D-37A0A075B6S9 117 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 HLA-DRB4P13762 266 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 HLA-DRB4X5D2U9 266 aa12.36□□□□□ -0.43
SEMA3B-214ENST00000619119 ARHGAP32A7KAX9 2087 aa12.35□□□□□ -0.43
SEMA3B-214ENST00000619119 GAS8-AS1O95177 125 aa12.35□□□□□ -0.43
SEMA3B-214ENST00000619119 LOXP28300 417 aaPredicted RBP12.35□□□□□ -0.43
SEMA3B-214ENST00000619119 CSDC2Q9Y534 153 aaKnown RBP12.35□□□□□ -0.43
SEMA3B-214ENST00000619119 MYMXA0A1B0GTQ4 84 aa12.34□□□□□ -0.43
SEMA3B-214ENST00000619119 IGLV2-11P01706 119 aa12.34□□□□□ -0.43
SEMA3B-214ENST00000619119 ZNF493Q6ZR52 646 aa12.34□□□□□ -0.43
SEMA3B-214ENST00000619119 IGHV3-21A0A0B4J1V1 117 aa12.34□□□□□ -0.43
SEMA3B-214ENST00000619119 MRPL20Q9BYC9 149 aaKnown RBP12.34□□□□□ -0.43
SEMA3B-214ENST00000619119 ERHP84090 104 aaKnown RBP12.33□□□□□ -0.44
SEMA3B-214ENST00000619119 C10orf55Q5SWW7 151 aa12.33□□□□□ -0.44
SEMA3B-214ENST00000619119 PLXNB1O43157 2135 aa12.33□□□□□ -0.44
SEMA3B-214ENST00000619119 GP9P14770 177 aa12.33□□□□□ -0.44
SEMA3B-214ENST00000619119 GNLYP22749 145 aa12.33□□□□□ -0.44
SEMA3B-214ENST00000619119 SAA1P0DJI8 122 aaPredicted RBP12.32□□□□□ -0.44
SEMA3B-214ENST00000619119 LINC00574Q9H8X3 128 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms