RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 F5H768 121 aa12.17□□□□□ -0.46
COL5A1-208ENST00000618395 ZNF561-AS1K7EIQ3 104 aa12.17□□□□□ -0.46
COL5A1-208ENST00000618395 WFDC11Q8NEX6 87 aa12.17□□□□□ -0.46
COL5A1-208ENST00000618395 NDUFC1O43677 76 aa12.16□□□□□ -0.46
COL5A1-208ENST00000618395 FAM216BQ8N7L0 139 aa12.16□□□□□ -0.46
COL5A1-208ENST00000618395 PYGO2Q9BRQ0 406 aa12.16□□□□□ -0.46
COL5A1-208ENST00000618395 SMIM2Q9BVW6 85 aa12.16□□□□□ -0.46
COL5A1-208ENST00000618395 TRBV10-2A0A0K0K1G8 114 aa12.16□□□□□ -0.46
COL5A1-208ENST00000618395 CCL4P13236 92 aa12.16□□□□□ -0.46
COL5A1-208ENST00000618395 NDPQ00604 133 aa12.16□□□□□ -0.46
COL5A1-208ENST00000618395 LINC01620Q4KN68 170 aa12.16□□□□□ -0.46
COL5A1-208ENST00000618395 PSG7Q13046 419 aa12.16□□□□□ -0.46
COL5A1-208ENST00000618395 JMJD7-PLA2G4BH0Y9G9 81 aa12.16□□□□□ -0.46
COL5A1-208ENST00000618395 SDHAF1A6NFY7 115 aa12.15□□□□□ -0.46
COL5A1-208ENST00000618395 A0A087WV48 116 aa12.15□□□□□ -0.46
COL5A1-208ENST00000618395 TRAV3A0A0B4J244 114 aa12.15□□□□□ -0.46
COL5A1-208ENST00000618395 SMIM10L1P0DMW3 83 aa12.15□□□□□ -0.46
COL5A1-208ENST00000618395 SMIM10Q96HG1 83 aa12.15□□□□□ -0.46
COL5A1-208ENST00000618395 C8orf49Q96NF6 230 aa12.15□□□□□ -0.46
COL5A1-208ENST00000618395 CSRP3P50461 194 aa12.15□□□□□ -0.46
COL5A1-208ENST00000618395 C1orf162Q8NEQ5 155 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-208ENST00000618395 LYZL4Q96KX0 146 aa12.15□□□□□ -0.46
COL5A1-208ENST00000618395 C20orf78Q9BR46 151 aa12.15□□□□□ -0.46
COL5A1-208ENST00000618395 RETNQ9HD89 108 aa12.15□□□□□ -0.46
COL5A1-208ENST00000618395 FXYD2P54710 66 aa12.15□□□□□ -0.47
COL5A1-208ENST00000618395 ZNF501Q96CX3 271 aaPredicted RBP12.15□□□□□ -0.47
COL5A1-208ENST00000618395 WBP1Q96G27 269 aa12.15□□□□□ -0.47
COL5A1-208ENST00000618395 PTPRBP23467 1997 aa12.14□□□□□ -0.47
COL5A1-208ENST00000618395 LGALS9O00182 355 aa12.14□□□□□ -0.47
COL5A1-208ENST00000618395 EFNA4P52798 201 aa12.14□□□□□ -0.47
COL5A1-208ENST00000618395 NREPQ16612 68 aa12.14□□□□□ -0.47
COL5A1-208ENST00000618395 ZNF831Q5JPB2 1677 aa12.14□□□□□ -0.47
COL5A1-208ENST00000618395 TRAV23DV6A0A075B6W5 121 aa12.14□□□□□ -0.47
COL5A1-208ENST00000618395 CELA2AP08217 269 aa12.14□□□□□ -0.47
COL5A1-208ENST00000618395 Q71RC1 249 aaPredicted RBP12.14□□□□□ -0.47
COL5A1-208ENST00000618395 M0QXV9 152 aa12.14□□□□□ -0.47
COL5A1-208ENST00000618395 CENPVL3A0A0U1RRI6 287 aa12.13□□□□□ -0.47
COL5A1-208ENST00000618395 TRBV12-3P01733 135 aa12.13□□□□□ -0.47
COL5A1-208ENST00000618395 TRAV26-2A0A0B4J265 109 aa12.13□□□□□ -0.47
COL5A1-208ENST00000618395 CMC4P56277 68 aaPredicted RBP12.13□□□□□ -0.47
COL5A1-208ENST00000618395 CECR9P0C854 216 aa12.12□□□□□ -0.47
COL5A1-208ENST00000618395 ATP5J2P56134 94 aa12.12□□□□□ -0.47
COL5A1-208ENST00000618395 SIP14410 1827 aa12.12□□□□□ -0.47
COL5A1-208ENST00000618395 LYPD3O95274 346 aa12.12□□□□□ -0.47
COL5A1-208ENST00000618395 CHCHD2Q9Y6H1 151 aaPredicted RBP12.12□□□□□ -0.47
COL5A1-208ENST00000618395 LYRM9A8MSI8 78 aa12.12□□□□□ -0.47
COL5A1-208ENST00000618395 KIAA1549LQ6ZVL6 1849 aa12.12□□□□□ -0.47
COL5A1-208ENST00000618395 IGHV3OR16-10A0A075B7F0 116 aa12.12□□□□□ -0.47
COL5A1-208ENST00000618395 SMRP1Q8NCR6 262 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 FGFBP3Q8TAT2 258 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 UPK3BQ9BT76 320 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 C4orf51C9J302 202 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 RBX1P62877 108 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 LILRA6Q6PI73 481 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 LRRC75A-AS1Q8N1F1 130 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 PRR30Q53SZ7 412 aaPredicted RBP12.11□□□□□ -0.47
COL5A1-208ENST00000618395 HIGD2BQ4VC39 106 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 C20orf197Q8N268 126 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 K7ERS5 55 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 A4D1N5 150 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 CCL3L1P16619 93 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 A6NED7 52 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 ELANEP08246 267 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 UBE2BP63146 152 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 C10orf105Q8TEF2 133 aa12.11□□□□□ -0.47
COL5A1-208ENST00000618395 RPP25Q9BUL9 199 aaKnown RBP12.1□□□□□ -0.47
COL5A1-208ENST00000618395 TMEM61Q8N0U2 210 aa12.1□□□□□ -0.47
COL5A1-208ENST00000618395 SHANK2-AS3Q9BTD1 123 aa12.1□□□□□ -0.47
COL5A1-208ENST00000618395 FAM201AQ5SY85 155 aa12.1□□□□□ -0.47
COL5A1-208ENST00000618395 COLCA1Q6ZS62 124 aa12.1□□□□□ -0.47
COL5A1-208ENST00000618395 TMEM256-PLSCR3K7ERE1 68 aa12.1□□□□□ -0.47
COL5A1-208ENST00000618395 Q6ZS49 121 aa12.1□□□□□ -0.47
COL5A1-208ENST00000618395 DYNAPQ8N1N2 210 aa12.09□□□□□ -0.47
COL5A1-208ENST00000618395 ZNF106Q9H2Y7 1883 aaKnown RBP12.09□□□□□ -0.47
COL5A1-208ENST00000618395 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
COL5A1-208ENST00000618395 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
COL5A1-208ENST00000618395 TRBV6-6A0A0A6YYG2 114 aa12.09□□□□□ -0.47
COL5A1-208ENST00000618395 NXPH4O95158 308 aa12.09□□□□□ -0.47
COL5A1-208ENST00000618395 ZCCHC24Q8N2G6 241 aaKnown RBP12.09□□□□□ -0.47
COL5A1-208ENST00000618395 PRR15LQ9BU68 103 aa12.09□□□□□ -0.47
COL5A1-208ENST00000618395 PSCAO43653 123 aa12.09□□□□□ -0.47
COL5A1-208ENST00000618395 PTPN13Q12923 2485 aa12.08□□□□□ -0.47
COL5A1-208ENST00000618395 FOXF2Q12947 444 aa12.08□□□□□ -0.48
COL5A1-208ENST00000618395 RHOHQ15669 191 aa12.08□□□□□ -0.48
COL5A1-208ENST00000618395 ZC2HC1AQ96GY0 325 aa12.08□□□□□ -0.48
COL5A1-208ENST00000618395 TIMM17BO60830 172 aa12.08□□□□□ -0.48
COL5A1-208ENST00000618395 NDUFB1O75438 58 aa12.08□□□□□ -0.48
COL5A1-208ENST00000618395 WISP1O95388 367 aa12.08□□□□□ -0.48
COL5A1-208ENST00000618395 FANCD2OSQ96PS1 177 aa12.08□□□□□ -0.48
COL5A1-208ENST00000618395 PRDM6Q9NQX0 595 aa12.08□□□□□ -0.48
COL5A1-208ENST00000618395 COX7B2Q8TF08 81 aa12.08□□□□□ -0.48
COL5A1-208ENST00000618395 Q9H8V8 135 aa12.07□□□□□ -0.48
COL5A1-208ENST00000618395 DEFB105AQ8NG35 78 aa12.07□□□□□ -0.48
COL5A1-208ENST00000618395 ADAMTS7Q9UKP4 1686 aa12.07□□□□□ -0.48
COL5A1-208ENST00000618395 OPRPNQ99935 248 aaPredicted RBP12.07□□□□□ -0.48
COL5A1-208ENST00000618395 CUL9Q8IWT3 2517 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 QRFPP83859 136 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 ZNF726P1Q15940 193 aa12.06□□□□□ -0.48
COL5A1-208ENST00000618395 NEU4Q8WWR8 484 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-208ENST00000618395 IGLV3-21P80748 117 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms