RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 APC2O95996 2303 aa9.27□□□□□ -0.93
TPM3-223ENST00000611659 FANCD2OSQ96PS1 177 aa9.27□□□□□ -0.93
TPM3-223ENST00000611659 IGHV3OR16-13A0A075B7E8 117 aa9.26□□□□□ -0.93
TPM3-223ENST00000611659 IGHV3-74A0A0B4J1X5 117 aa9.26□□□□□ -0.93
TPM3-223ENST00000611659 RAB9AP51151 201 aa9.26□□□□□ -0.93
TPM3-223ENST00000611659 CFHR4Q92496 578 aa9.26□□□□□ -0.93
TPM3-223ENST00000611659 CYSLTR1Q9Y271 337 aa9.26□□□□□ -0.93
TPM3-223ENST00000611659 SMAD5-AS1Q9Y6J3 95 aa9.26□□□□□ -0.93
TPM3-223ENST00000611659 CKS1BP61024 79 aa9.26□□□□□ -0.93
TPM3-223ENST00000611659 LAGE3Q14657 143 aa9.26□□□□□ -0.93
TPM3-223ENST00000611659 NDUFS8O00217 210 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 IGHG4P01861 327 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 SCGB2A2Q13296 93 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 SRSF8Q9BRL6 282 aaKnown RBP9.25□□□□□ -0.93
TPM3-223ENST00000611659 MED13LQ71F56 2210 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 E7EQL1 145 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 F8W735 103 aaPredicted RBP9.25□□□□□ -0.93
TPM3-223ENST00000611659 RRN3P1Q2M238 152 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 FAM57AQ8TBR7 257 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 ABCA4P78363 2273 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 APOMO95445 188 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 SRSF1Q07955 248 aaKnown RBP eCLIP9.25□□□□□ -0.932e-7■□□□□ 8.7
TPM3-223ENST00000611659 COX8CQ7Z4L0 72 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 SPATA25Q9BR10 227 aa9.25□□□□□ -0.93
TPM3-223ENST00000611659 IGLV11-55A0A075B6I3 123 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 KLRD1Q13241 179 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 RNF5Q99942 180 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 C20orf78Q9BR46 151 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 LRBAP50851 2863 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 ARHGAP32A7KAX9 2087 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 A0A087WX48 190 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 OR11H12B2RN74 326 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 SPANXN1Q5VSR9 72 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 OR11H1Q8NG94 326 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 OR11H2Q8NH07 326 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
TPM3-223ENST00000611659 IGLV2-18A0A075B6J9 118 aa9.23□□□□□ -0.93
TPM3-223ENST00000611659 IGKV3D-20A0A0C4DH25 116 aa9.23□□□□□ -0.93
TPM3-223ENST00000611659 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
TPM3-223ENST00000611659 CEP295Q9C0D2 2601 aa9.23□□□□□ -0.93
TPM3-223ENST00000611659 IGHV3-49A0A0A0MS15 119 aa9.23□□□□□ -0.93
TPM3-223ENST00000611659 NDPQ00604 133 aa9.23□□□□□ -0.93
TPM3-223ENST00000611659 C5orf64Q2M2E5 130 aa9.23□□□□□ -0.93
TPM3-223ENST00000611659 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
TPM3-223ENST00000611659 MRPL16Q9NX20 251 aaKnown RBP9.23□□□□□ -0.93
TPM3-223ENST00000611659 PGPEP1Q9NXJ5 209 aa9.23□□□□□ -0.93
TPM3-223ENST00000611659 DPM3Q9P2X0 92 aa9.23□□□□□ -0.93
TPM3-223ENST00000611659 LY6LH3BQJ8 138 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 J3KRW8 73 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 PLNP26678 52 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 CACNA1BQ00975 2339 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 TAL2Q16559 108 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 Q6ZS92 163 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 ZNF502Q8TBZ5 544 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 C11orf21Q9P2W6 132 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 SVEP1Q4LDE5 3571 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 LOC107984156A0A0G2JMH3 177 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 HOXA3O43365 443 aaPredicted RBP9.22□□□□□ -0.93
TPM3-223ENST00000611659 CTSGP08311 255 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 Q6ZQT7 251 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 ARL17AQ8IVW1 177 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 SPRY2O43597 315 aa9.22□□□□□ -0.93
TPM3-223ENST00000611659 MYMXA0A1B0GTQ4 84 aa9.21□□□□□ -0.93
TPM3-223ENST00000611659 SYT8Q8NBV8 401 aa9.21□□□□□ -0.93
TPM3-223ENST00000611659 ZNF418Q8TF45 676 aaPredicted RBP9.21□□□□□ -0.93
TPM3-223ENST00000611659 TRBV7-3A0A075B6L6 115 aa9.21□□□□□ -0.94
TPM3-223ENST00000611659 LY6HO94772 140 aa9.21□□□□□ -0.94
TPM3-223ENST00000611659 SCGB1D4Q6XE38 83 aa9.21□□□□□ -0.94
TPM3-223ENST00000611659 PIP4P1Q86T03 277 aa9.21□□□□□ -0.94
TPM3-223ENST00000611659 NRACQ8N912 160 aa9.21□□□□□ -0.94
TPM3-223ENST00000611659 PRO0461Q9UI25 63 aa9.21□□□□□ -0.94
TPM3-223ENST00000611659 F8VRH5 84 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 H7C1H1 209 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 SCGB2A1O75556 95 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 HLA-DRB4P13762 266 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 PSMB2P49721 201 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 SCGB3A1Q96QR1 104 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 RAXQ9Y2V3 346 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 HLA-DRB4X5D2U9 266 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 ZNF292O60281 2723 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.94
TPM3-223ENST00000611659 VKORC1Q9BQB6 163 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 AGPAT4-IT1Q9H0P7 198 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 TRAV26-1A0A087WT03 109 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 H3BVH4 76 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 SRSF2Q01130 221 aaKnown RBP9.2□□□□□ -0.94
TPM3-223ENST00000611659 TMEM78Q5T7P6 136 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 HIF1ANQ9NWT6 349 aa9.2□□□□□ -0.94
TPM3-223ENST00000611659 LINC01549A6NIU2 74 aa9.19□□□□□ -0.94
TPM3-223ENST00000611659 MORN3Q6PF18 240 aaPredicted RBP9.19□□□□□ -0.94
TPM3-223ENST00000611659 IGFL3Q6UXB1 125 aa9.19□□□□□ -0.94
TPM3-223ENST00000611659 CUL9Q8IWT3 2517 aa9.19□□□□□ -0.94
TPM3-223ENST00000611659 FOXI1Q12951 378 aa9.19□□□□□ -0.94
TPM3-223ENST00000611659 DEFB104AQ8WTQ1 72 aa9.19□□□□□ -0.94
TPM3-223ENST00000611659 TLN1Q9Y490 2541 aaKnown RBP9.18□□□□□ -0.94
TPM3-223ENST00000611659 M0R381 172 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 NPBQ8NG41 125 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 GLMPQ8WWB7 406 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 PTH2Q96A98 100 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 GEMIN7Q9H840 131 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms