RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 XGP55808 180 aa10.93□□□□□ -0.66
LIM2-202ENST00000596399 ARPC5LQ9BPX5 153 aa10.93□□□□□ -0.66
LIM2-202ENST00000596399 PAXXQ9BUH6 204 aa10.93□□□□□ -0.66
LIM2-202ENST00000596399 FAM240BA0A1B0GVZ2 78 aa10.92□□□□□ -0.66
LIM2-202ENST00000596399 EPM2AB3EWF7 344 aa10.92□□□□□ -0.66
LIM2-202ENST00000596399 H0YIZ8 118 aa10.92□□□□□ -0.66
LIM2-202ENST00000596399 EIF3GO75821 320 aaKnown RBP eCLIP10.92□□□□□ -0.66
LIM2-202ENST00000596399 LRRC37A5PQ49AS3 106 aa10.92□□□□□ -0.66
LIM2-202ENST00000596399 WFDC10BQ8IUB3 73 aa10.92□□□□□ -0.66
LIM2-202ENST00000596399 ZNF479Q96JC4 524 aa10.92□□□□□ -0.66
LIM2-202ENST00000596399 TRGV4A0A0C4DH28 118 aa10.91□□□□□ -0.66
LIM2-202ENST00000596399 K7EQD1 137 aa10.91□□□□□ -0.66
LIM2-202ENST00000596399 KRTAP10-1P60331 282 aa10.91□□□□□ -0.66
LIM2-202ENST00000596399 ERVFC1-1P60608 527 aa10.91□□□□□ -0.66
LIM2-202ENST00000596399 RANP62826 216 aaKnown RBP10.91□□□□□ -0.66
LIM2-202ENST00000596399 ZNF415Q09FC8 603 aa10.91□□□□□ -0.66
LIM2-202ENST00000596399 MRPL23Q16540 153 aaKnown RBP10.91□□□□□ -0.66
LIM2-202ENST00000596399 PGPEP1Q9NXJ5 209 aa10.91□□□□□ -0.66
LIM2-202ENST00000596399 TMEM183BQ1AE95 376 aa10.9□□□□□ -0.66
LIM2-202ENST00000596399 NEGR1Q7Z3B1 354 aa10.9□□□□□ -0.66
LIM2-202ENST00000596399 TMEM183AQ8IXX5 376 aa10.9□□□□□ -0.66
LIM2-202ENST00000596399 LYPD1Q8N2G4 141 aa10.9□□□□□ -0.66
LIM2-202ENST00000596399 MRPL32Q9BYC8 188 aaKnown RBP10.9□□□□□ -0.66
LIM2-202ENST00000596399 WDR61Q9GZS3 305 aaKnown RBP10.9□□□□□ -0.66
LIM2-202ENST00000596399 A0A087WTM6 91 aa10.89□□□□□ -0.67
LIM2-202ENST00000596399 OR7C2O60412 319 aa10.89□□□□□ -0.67
LIM2-202ENST00000596399 GYPEP15421 78 aa10.89□□□□□ -0.67
LIM2-202ENST00000596399 SLAQ13239 276 aa10.89□□□□□ -0.67
LIM2-202ENST00000596399 ZNF266Q14584 549 aa10.89□□□□□ -0.67
LIM2-202ENST00000596399 CCDC32Q9BV29 185 aa10.89□□□□□ -0.67
LIM2-202ENST00000596399 LY96Q9Y6Y9 160 aa10.89□□□□□ -0.67
LIM2-202ENST00000596399 EREGO14944 169 aa10.88□□□□□ -0.67
LIM2-202ENST00000596399 SLC25A31Q9H0C2 315 aa10.88□□□□□ -0.67
LIM2-202ENST00000596399 VPS13BQ7Z7G8 4022 aa10.87□□□□□ -0.67
LIM2-202ENST00000596399 LOC100131303A0A0U1RQF7 123 aa10.87□□□□□ -0.67
LIM2-202ENST00000596399 GNRH2O43555 120 aa10.87□□□□□ -0.67
LIM2-202ENST00000596399 SRIP30626 198 aa10.87□□□□□ -0.67
LIM2-202ENST00000596399 CSN1S1P47710 185 aa10.87□□□□□ -0.67
LIM2-202ENST00000596399 HAMPP81172 84 aa10.87□□□□□ -0.67
LIM2-202ENST00000596399 HYLS1Q96M11 299 aa10.87□□□□□ -0.67
LIM2-202ENST00000596399 MSRB1Q9NZV6 116 aa10.87□□□□□ -0.67
LIM2-202ENST00000596399 NAGKQ9UJ70 344 aa10.87□□□□□ -0.67
LIM2-202ENST00000596399 MYCBP2O75592 4640 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 TRBV7-9A0A0J9YWB2 115 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 RBAKDNA6NC62 111 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 DIRC3C9JPN6 131 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 SMR3BP02814 79 aaPredicted RBP10.86□□□□□ -0.67
LIM2-202ENST00000596399 INAFM2P0DMQ5 153 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 UBE2L3P68036 154 aaKnown RBP10.86□□□□□ -0.67
LIM2-202ENST00000596399 ASAH1Q13510 395 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 Q6AWC8 147 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 MZT2BQ6NZ67 158 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 NFE4Q86UQ8 179 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 IQCF2Q8IXL9 164 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 OR10G4Q8NGN3 311 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 RASL10AQ92737 203 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 NMES1Q9C002 83 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 RPH3ALQ9UNE2 315 aa10.86□□□□□ -0.67
LIM2-202ENST00000596399 FFAR4Q5NUL3 377 aa10.85□□□□□ -0.67
LIM2-202ENST00000596399 Q5VSD8 79 aa10.85□□□□□ -0.67
LIM2-202ENST00000596399 CDPF1Q6NVV7 123 aa10.85□□□□□ -0.67
LIM2-202ENST00000596399 FAM159AQ6UWV7 190 aa10.85□□□□□ -0.67
LIM2-202ENST00000596399 SMIM3Q9BZL3 60 aa10.85□□□□□ -0.67
LIM2-202ENST00000596399 PTTG2Q9NZH5 202 aa10.85□□□□□ -0.67
LIM2-202ENST00000596399 SRRM2Q9UQ35 2752 aaKnown RBP10.85□□□□□ -0.67
LIM2-202ENST00000596399 TRAV9-2A0A087WT02 112 aa10.84□□□□□ -0.67
LIM2-202ENST00000596399 IGHV3-16A0A0C4DH30 117 aa10.84□□□□□ -0.67
LIM2-202ENST00000596399 C17orf112F2Z3M2 114 aa10.84□□□□□ -0.67
LIM2-202ENST00000596399 IFNA5P01569 189 aa10.84□□□□□ -0.67
LIM2-202ENST00000596399 H2BFSP57053 126 aa10.84□□□□□ -0.67
LIM2-202ENST00000596399 PCNPQ8WW12 178 aaKnown RBP10.84□□□□□ -0.67
LIM2-202ENST00000596399 ATP5SQ99766 215 aa10.84□□□□□ -0.67
LIM2-202ENST00000596399 SPXQ9BT56 116 aa10.84□□□□□ -0.67
LIM2-202ENST00000596399 KCNIP2Q9NS61 270 aa10.84□□□□□ -0.67
LIM2-202ENST00000596399 F6UZH7 168 aa10.83□□□□□ -0.68
LIM2-202ENST00000596399 CRYGDP07320 174 aa10.83□□□□□ -0.68
LIM2-202ENST00000596399 EVI2AP22794 236 aa10.83□□□□□ -0.68
LIM2-202ENST00000596399 IFITM3Q01628 133 aa10.83□□□□□ -0.68
LIM2-202ENST00000596399 ENKURQ8TC29 256 aa10.83□□□□□ -0.68
LIM2-202ENST00000596399 TVP23CQ96ET8 276 aa10.83□□□□□ -0.68
LIM2-202ENST00000596399 TRGV11A0A075B6L2 103 aa10.82□□□□□ -0.68
LIM2-202ENST00000596399 TRAV8-1A0A0A6YYK1 113 aa10.82□□□□□ -0.68
LIM2-202ENST00000596399 TRAV4A0A0B4J268 109 aa10.82□□□□□ -0.68
LIM2-202ENST00000596399 PGPA6NDG6 321 aa10.82□□□□□ -0.68
LIM2-202ENST00000596399 ORM1P02763 201 aa10.82□□□□□ -0.68
LIM2-202ENST00000596399 OR4C5Q8NGB2 326 aa10.82□□□□□ -0.68
LIM2-202ENST00000596399 PPP1R1CQ8WVI7 109 aa10.82□□□□□ -0.68
LIM2-202ENST00000596399 NDUFA13Q9P0J0 144 aa10.82□□□□□ -0.68
LIM2-202ENST00000596399 HSPB11Q9Y547 144 aa10.82□□□□□ -0.68
LIM2-202ENST00000596399 TYMSP04818 313 aa10.81□□□□□ -0.68
LIM2-202ENST00000596399 GCSHP23434 173 aa10.81□□□□□ -0.68
LIM2-202ENST00000596399 GNG5P63218 68 aa10.81□□□□□ -0.68
LIM2-202ENST00000596399 TDRG1Q3Y452 100 aa10.81□□□□□ -0.68
LIM2-202ENST00000596399 KHDC3LQ587J8 217 aa10.81□□□□□ -0.68
LIM2-202ENST00000596399 GOLT1AQ6ZVE7 132 aa10.81□□□□□ -0.68
LIM2-202ENST00000596399 SGK494Q96LW2 274 aa10.81□□□□□ -0.68
LIM2-202ENST00000596399 WFDC1Q9HC57 220 aa10.81□□□□□ -0.68
LIM2-202ENST00000596399 MBD2Q9UBB5 411 aa10.81□□□□□ -0.68
LIM2-202ENST00000596399 LENEPQ9Y5L5 61 aa10.81□□□□□ -0.68
LIM2-202ENST00000596399 C9JCJ5 164 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms