RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 U3KQK5 164 aa11.86□□□□□ -0.51
CIRBP-228ENST00000590347 ZNF493Q6ZR52 646 aa11.86□□□□□ -0.51
CIRBP-228ENST00000590347 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
CIRBP-228ENST00000590347 ASH1LQ9NR48 2969 aaKnown RBP11.86□□□□□ -0.51
CIRBP-228ENST00000590347 A8MWV9 139 aa11.86□□□□□ -0.51
CIRBP-228ENST00000590347 M0QXV9 152 aa11.86□□□□□ -0.51
CIRBP-228ENST00000590347 MEIG1Q5JSS6 88 aa11.86□□□□□ -0.51
CIRBP-228ENST00000590347 BEX4Q9NWD9 120 aaPredicted RBP11.86□□□□□ -0.51
CIRBP-228ENST00000590347 C9JAW5 83 aa11.85□□□□□ -0.51
CIRBP-228ENST00000590347 TRGV3P03979 118 aa11.85□□□□□ -0.51
CIRBP-228ENST00000590347 LGALS1P09382 135 aaKnown RBP11.85□□□□□ -0.51
CIRBP-228ENST00000590347 RNF185Q96GF1 192 aa11.85□□□□□ -0.51
CIRBP-228ENST00000590347 AAMDCQ9H7C9 122 aa11.85□□□□□ -0.51
CIRBP-228ENST00000590347 CRYGCP07315 174 aa11.85□□□□□ -0.51
CIRBP-228ENST00000590347 CGB3P0DN86 165 aa11.85□□□□□ -0.51
CIRBP-228ENST00000590347 CGB7P0DN87 165 aa11.85□□□□□ -0.51
CIRBP-228ENST00000590347 ZNF71Q9NQZ8 489 aaPredicted RBP11.85□□□□□ -0.51
CIRBP-228ENST00000590347 ZNF815PA8K554 130 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 TMEM78Q5T7P6 136 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 MYOZ3Q8TDC0 251 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 ONECUT1Q9UBC0 465 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 MYMXA0A1B0GTQ4 84 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 MRPL23Q16540 153 aaKnown RBP11.84□□□□□ -0.51
CIRBP-228ENST00000590347 RAXQ9Y2V3 346 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 MALRD1Q5VYJ5 2156 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 SPTBN1Q01082 2364 aaKnown RBP11.84□□□□□ -0.51
CIRBP-228ENST00000590347 TRBV19A0A075B6N1 114 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 SLC25A16P16260 332 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 TMEM155Q4W5P6 130 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 SIGLEC15Q6ZMC9 328 aa11.84□□□□□ -0.51
CIRBP-228ENST00000590347 IGF2RP11717 2491 aa11.83□□□□□ -0.52
CIRBP-228ENST00000590347 AKAP6Q13023 2319 aa11.83□□□□□ -0.52
CIRBP-228ENST00000590347 NGBQ9NPG2 151 aa11.83□□□□□ -0.52
CIRBP-228ENST00000590347 IFITM1P13164 125 aa11.82□□□□□ -0.52
CIRBP-228ENST00000590347 CHCHD5Q9BSY4 110 aa11.82□□□□□ -0.52
CIRBP-228ENST00000590347 IGHV3-23P01764 117 aa11.82□□□□□ -0.52
CIRBP-228ENST00000590347 NTN5Q8WTR8 489 aaPredicted RBP11.82□□□□□ -0.52
CIRBP-228ENST00000590347 PRADC1Q9BSG0 188 aa11.82□□□□□ -0.52
CIRBP-228ENST00000590347 TNFRSF18Q9Y5U5 241 aa11.82□□□□□ -0.52
CIRBP-228ENST00000590347 ABCA4P78363 2273 aa11.82□□□□□ -0.52
CIRBP-228ENST00000590347 A0A087WX48 190 aa11.82□□□□□ -0.52
CIRBP-228ENST00000590347 RHODO00212 210 aa11.82□□□□□ -0.52
CIRBP-228ENST00000590347 PPP1R27Q86WC6 154 aa11.82□□□□□ -0.52
CIRBP-228ENST00000590347 YAE1D1Q9NRH1 226 aa11.82□□□□□ -0.52
CIRBP-228ENST00000590347 PIP4P1Q86T03 277 aa11.81□□□□□ -0.52
CIRBP-228ENST00000590347 RASL11BQ9BPW5 248 aa11.81□□□□□ -0.52
CIRBP-228ENST00000590347 ERCC8Q13216 396 aa11.81□□□□□ -0.52
CIRBP-228ENST00000590347 DTX2Q86UW9 622 aa11.81□□□□□ -0.52
CIRBP-228ENST00000590347 SPTBN4Q9H254 2564 aa11.81□□□□□ -0.52
CIRBP-228ENST00000590347 LOC107984640A0A0U1RRK4 108 aa11.8□□□□□ -0.52
CIRBP-228ENST00000590347 J3KRW8 73 aa11.8□□□□□ -0.52
CIRBP-228ENST00000590347 SRSF1Q07955 248 aaKnown RBP eCLIP11.8□□□□□ -0.521e-11■■□□□ 11.7
CIRBP-228ENST00000590347 ATP6V0E2Q8NHE4 81 aa11.8□□□□□ -0.52
CIRBP-228ENST00000590347 TLN1Q9Y490 2541 aaKnown RBP11.8□□□□□ -0.52
CIRBP-228ENST00000590347 TEX49A0A1B0GTD5 131 aa11.8□□□□□ -0.52
CIRBP-228ENST00000590347 IGHV4-39P01824 125 aa11.8□□□□□ -0.52
CIRBP-228ENST00000590347 TRGV9Q99603 122 aa11.8□□□□□ -0.52
CIRBP-228ENST00000590347 VPREB3Q9UKI3 123 aa11.8□□□□□ -0.52
CIRBP-228ENST00000590347 K7EM74 188 aa11.8□□□□□ -0.52
CIRBP-228ENST00000590347 ATP5LO75964 103 aa11.8□□□□□ -0.52
CIRBP-228ENST00000590347 Q6ZS46 218 aa11.8□□□□□ -0.52
CIRBP-228ENST00000590347 TM4SF5O14894 197 aa11.79□□□□□ -0.52
CIRBP-228ENST00000590347 ATRXP46100 2492 aa11.79□□□□□ -0.52
CIRBP-228ENST00000590347 C15orf53Q8NAA6 179 aa11.79□□□□□ -0.52
CIRBP-228ENST00000590347 OR11H6Q8NGC7 330 aa11.79□□□□□ -0.52
CIRBP-228ENST00000590347 OR4C13Q8NGP0 309 aa11.79□□□□□ -0.52
CIRBP-228ENST00000590347 RAB9BQ9NP90 201 aa11.79□□□□□ -0.52
CIRBP-228ENST00000590347 TCF15Q12870 199 aa11.79□□□□□ -0.52
CIRBP-228ENST00000590347 TMEM167AQ8TBQ9 72 aa11.79□□□□□ -0.52
CIRBP-228ENST00000590347 SLC25A20O43772 301 aa11.78□□□□□ -0.52
CIRBP-228ENST00000590347 GATD1Q8NB37 220 aa11.78□□□□□ -0.52
CIRBP-228ENST00000590347 IGHV3OR16-13A0A075B7E8 117 aa11.78□□□□□ -0.52
CIRBP-228ENST00000590347 IGHV3-74A0A0B4J1X5 117 aa11.78□□□□□ -0.52
CIRBP-228ENST00000590347 IGLV2-23P01705 113 aa11.78□□□□□ -0.52
CIRBP-228ENST00000590347 CCL8P80075 99 aa11.78□□□□□ -0.52
CIRBP-228ENST00000590347 C9orf106Q8NAJ2 232 aa11.78□□□□□ -0.52
CIRBP-228ENST00000590347 LRBAP50851 2863 aa11.78□□□□□ -0.52
CIRBP-228ENST00000590347 IGKV1-17P01599 117 aa11.77□□□□□ -0.52
CIRBP-228ENST00000590347 ELANEP08246 267 aa11.77□□□□□ -0.52
CIRBP-228ENST00000590347 RPL27AP46776 148 aaKnown RBP11.77□□□□□ -0.52
CIRBP-228ENST00000590347 IGHV1-18A0A0C4DH31 117 aa11.77□□□□□ -0.53
CIRBP-228ENST00000590347 HOXB4P17483 251 aaPredicted RBP11.77□□□□□ -0.53
CIRBP-228ENST00000590347 TAL2Q16559 108 aa11.77□□□□□ -0.53
CIRBP-228ENST00000590347 PIFOQ8TCI5 191 aa11.77□□□□□ -0.53
CIRBP-228ENST00000590347 GAFA1Q96PS6 74 aa11.77□□□□□ -0.53
CIRBP-228ENST00000590347 NXT2Q9NPJ8 142 aaKnown RBP11.77□□□□□ -0.53
CIRBP-228ENST00000590347 M0R1B8 84 aa11.77□□□□□ -0.53
CIRBP-228ENST00000590347 SCNM1Q9BWG6 230 aa11.77□□□□□ -0.53
CIRBP-228ENST00000590347 CHD8Q9HCK8 2581 aa11.76□□□□□ -0.53
CIRBP-228ENST00000590347 RAI1Q7Z5J4 1906 aaPredicted RBP11.76□□□□□ -0.53
CIRBP-228ENST00000590347 RPL7P18124 248 aaKnown RBP11.76□□□□□ -0.53
CIRBP-228ENST00000590347 SRD5A1P18405 259 aa11.76□□□□□ -0.53
CIRBP-228ENST00000590347 ATP5IP56385 69 aaPredicted RBP11.75□□□□□ -0.53
CIRBP-228ENST00000590347 LAGE3Q14657 143 aa11.75□□□□□ -0.53
CIRBP-228ENST00000590347 ZNF575Q86XF7 245 aa11.75□□□□□ -0.53
CIRBP-228ENST00000590347 NDUFA11Q86Y39 141 aa11.75□□□□□ -0.53
CIRBP-228ENST00000590347 PRR25Q96S07 402 aa11.75□□□□□ -0.53
CIRBP-228ENST00000590347 KLK5Q9Y337 293 aaPredicted RBP11.75□□□□□ -0.53
CIRBP-228ENST00000590347 IGHV3-66A0A0C4DH42 116 aa11.75□□□□□ -0.53
CIRBP-228ENST00000590347 UBE2D3P61077 147 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms