RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 TNFRSF18Q9Y5U5 241 aa13.19□□□□□ -0.3
TRAF4-216ENST00000586813 PRAF2O60831 178 aa13.18□□□□□ -0.3
TRAF4-216ENST00000586813 CDPF1Q6NVV7 123 aa13.18□□□□□ -0.3
TRAF4-216ENST00000586813 PAXXQ9BUH6 204 aa13.18□□□□□ -0.3
TRAF4-216ENST00000586813 MRPL32Q9BYC8 188 aaKnown RBP13.18□□□□□ -0.3
TRAF4-216ENST00000586813 KCNIP2Q9NS61 270 aa13.18□□□□□ -0.3
TRAF4-216ENST00000586813 PTTG2Q9NZH5 202 aa13.18□□□□□ -0.3
TRAF4-216ENST00000586813 FAM240BA0A1B0GVZ2 78 aa13.17□□□□□ -0.3
TRAF4-216ENST00000586813 EPM2AB3EWF7 344 aa13.17□□□□□ -0.3
TRAF4-216ENST00000586813 NEGR1Q7Z3B1 354 aa13.17□□□□□ -0.3
TRAF4-216ENST00000586813 NFE4Q86UQ8 179 aa13.17□□□□□ -0.3
TRAF4-216ENST00000586813 TRGV4A0A0C4DH28 118 aa13.16□□□□□ -0.3
TRAF4-216ENST00000586813 ZNF266Q14584 549 aa13.16□□□□□ -0.3
TRAF4-216ENST00000586813 MUC21Q5SSG8 566 aa13.16□□□□□ -0.3
TRAF4-216ENST00000586813 SLC25A31Q9H0C2 315 aa13.16□□□□□ -0.3
TRAF4-216ENST00000586813 MDFICQ9P1T7 246 aa13.16□□□□□ -0.3
TRAF4-216ENST00000586813 LY96Q9Y6Y9 160 aa13.16□□□□□ -0.3
TRAF4-216ENST00000586813 RBAKDNA6NC62 111 aa13.15□□□□□ -0.3
TRAF4-216ENST00000586813 E5RGE8 158 aa13.15□□□□□ -0.3
TRAF4-216ENST00000586813 DNAH10OSP0CZ25 163 aa13.15□□□□□ -0.3
TRAF4-216ENST00000586813 CSN1S1P47710 185 aa13.15□□□□□ -0.3
TRAF4-216ENST00000586813 WDR61Q9GZS3 305 aaKnown RBP13.15□□□□□ -0.3
TRAF4-216ENST00000586813 OR5AC2Q9NZP5 309 aa13.15□□□□□ -0.3
TRAF4-216ENST00000586813 TRAV9-2A0A087WT02 112 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 A0A087WTM6 91 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 K7EQD1 137 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 OR7C2O60412 319 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 SFTA3P0C7M3 94 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 SRIP30626 198 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 LRRC37A5PQ49AS3 106 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 WFDC10BQ8IUB3 73 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 IQCF2Q8IXL9 164 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 LYPD1Q8N2G4 141 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 ZNF479Q96JC4 524 aa13.14□□□□□ -0.31
TRAF4-216ENST00000586813 FAT1Q14517 4588 aa13.13□□□□□ -0.31
TRAF4-216ENST00000586813 HERC1Q15751 4861 aa13.13□□□□□ -0.31
TRAF4-216ENST00000586813 SIX6O95475 246 aa13.13□□□□□ -0.31
TRAF4-216ENST00000586813 XGP55808 180 aa13.13□□□□□ -0.31
TRAF4-216ENST00000586813 RANP62826 216 aaKnown RBP13.13□□□□□ -0.31
TRAF4-216ENST00000586813 UBE2L3P68036 154 aaKnown RBP13.13□□□□□ -0.31
TRAF4-216ENST00000586813 MZT2BQ6NZ67 158 aa13.13□□□□□ -0.31
TRAF4-216ENST00000586813 OR10G4Q8NGN3 311 aa13.13□□□□□ -0.31
TRAF4-216ENST00000586813 PCNPQ8WW12 178 aaKnown RBP13.13□□□□□ -0.31
TRAF4-216ENST00000586813 RASL10AQ92737 203 aa13.13□□□□□ -0.31
TRAF4-216ENST00000586813 C17orf112F2Z3M2 114 aa13.12□□□□□ -0.31
TRAF4-216ENST00000586813 H0YIZ8 118 aa13.12□□□□□ -0.31
TRAF4-216ENST00000586813 K7EP13 123 aa13.12□□□□□ -0.31
TRAF4-216ENST00000586813 TMEM183BQ1AE95 376 aa13.12□□□□□ -0.31
TRAF4-216ENST00000586813 Q6AWC8 147 aa13.12□□□□□ -0.31
TRAF4-216ENST00000586813 TMEM183AQ8IXX5 376 aa13.12□□□□□ -0.31
TRAF4-216ENST00000586813 NMES1Q9C002 83 aa13.12□□□□□ -0.31
TRAF4-216ENST00000586813 MSRB1Q9NZV6 116 aa13.12□□□□□ -0.31
TRAF4-216ENST00000586813 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
TRAF4-216ENST00000586813 ORM1P02763 201 aa13.11□□□□□ -0.31
TRAF4-216ENST00000586813 GYPEP15421 78 aa13.11□□□□□ -0.31
TRAF4-216ENST00000586813 ASAH1Q13510 395 aa13.11□□□□□ -0.31
TRAF4-216ENST00000586813 FAM159AQ6UWV7 190 aa13.11□□□□□ -0.31
TRAF4-216ENST00000586813 SPXQ9BT56 116 aa13.11□□□□□ -0.31
TRAF4-216ENST00000586813 TRGV11A0A075B6L2 103 aa13.1□□□□□ -0.31
TRAF4-216ENST00000586813 DIRC3C9JPN6 131 aa13.1□□□□□ -0.31
TRAF4-216ENST00000586813 EVI2AP22794 236 aa13.1□□□□□ -0.31
TRAF4-216ENST00000586813 KRTAP10-1P60331 282 aa13.1□□□□□ -0.31
TRAF4-216ENST00000586813 C9JCJ5 164 aa13.09□□□□□ -0.31
TRAF4-216ENST00000586813 IFNA5P01569 189 aa13.09□□□□□ -0.31
TRAF4-216ENST00000586813 KHDC3LQ587J8 217 aa13.09□□□□□ -0.31
TRAF4-216ENST00000586813 ATP5SQ99766 215 aa13.09□□□□□ -0.31
TRAF4-216ENST00000586813 TXNDC17Q9BRA2 123 aa13.09□□□□□ -0.31
TRAF4-216ENST00000586813 NAGKQ9UJ70 344 aa13.09□□□□□ -0.31
TRAF4-216ENST00000586813 TRAV4A0A0B4J268 109 aa13.08□□□□□ -0.32
TRAF4-216ENST00000586813 INAFM2P0DMQ5 153 aa13.08□□□□□ -0.32
TRAF4-216ENST00000586813 TDRG1Q3Y452 100 aa13.08□□□□□ -0.32
TRAF4-216ENST00000586813 FFAR4Q5NUL3 377 aa13.08□□□□□ -0.32
TRAF4-216ENST00000586813 Q5VSD8 79 aa13.08□□□□□ -0.32
TRAF4-216ENST00000586813 ENKURQ8TC29 256 aa13.08□□□□□ -0.32
TRAF4-216ENST00000586813 TMED6Q8WW62 240 aa13.08□□□□□ -0.32
TRAF4-216ENST00000586813 TAS2R45P59539 299 aa13.07□□□□□ -0.32
TRAF4-216ENST00000586813 CYCSP99999 105 aaKnown RBP13.07□□□□□ -0.32
TRAF4-216ENST00000586813 S100ZQ8WXG8 99 aa13.07□□□□□ -0.32
TRAF4-216ENST00000586813 HYLS1Q96M11 299 aa13.07□□□□□ -0.32
TRAF4-216ENST00000586813 A6NHS1 94 aa13.06□□□□□ -0.32
TRAF4-216ENST00000586813 CRYGDP07320 174 aa13.06□□□□□ -0.32
TRAF4-216ENST00000586813 LINC00299Q6ZSB3 139 aa13.06□□□□□ -0.32
TRAF4-216ENST00000586813 C10orf126Q8N4M7 172 aa13.06□□□□□ -0.32
TRAF4-216ENST00000586813 OR4C5Q8NGB2 326 aa13.06□□□□□ -0.32
TRAF4-216ENST00000586813 FRZBQ92765 325 aa13.06□□□□□ -0.32
TRAF4-216ENST00000586813 BATF3Q9NR55 127 aa13.06□□□□□ -0.32
TRAF4-216ENST00000586813 VPS13BQ7Z7G8 4022 aa13.06□□□□□ -0.32
TRAF4-216ENST00000586813 LOC100131303A0A0U1RQF7 123 aa13.05□□□□□ -0.32
TRAF4-216ENST00000586813 M0R2P5 195 aa13.05□□□□□ -0.32
TRAF4-216ENST00000586813 H2BFSP57053 126 aa13.05□□□□□ -0.32
TRAF4-216ENST00000586813 PPP1R1CQ8WVI7 109 aa13.05□□□□□ -0.32
TRAF4-216ENST00000586813 OTORQ9NRC9 128 aa13.05□□□□□ -0.32
TRAF4-216ENST00000586813 RPH3ALQ9UNE2 315 aa13.05□□□□□ -0.32
TRAF4-216ENST00000586813 HSPB11Q9Y547 144 aa13.05□□□□□ -0.32
TRAF4-216ENST00000586813 DMBT1Q9UGM3 2413 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-216ENST00000586813 IGHV3-16A0A0C4DH30 117 aa13.04□□□□□ -0.32
TRAF4-216ENST00000586813 GNRH2O43555 120 aa13.04□□□□□ -0.32
TRAF4-216ENST00000586813 EIF3GO75821 320 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAF4-216ENST00000586813 GCSHP23434 173 aa13.04□□□□□ -0.32
TRAF4-216ENST00000586813 CMTM2Q8TAZ6 248 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms