RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 D6R8Y8 96 aa13.35□□□□□ -0.27
ERBB2-212ENST00000582788 PSG9Q00887 426 aa13.35□□□□□ -0.27
ERBB2-212ENST00000582788 ECSCRQ19T08 205 aa13.35□□□□□ -0.27
ERBB2-212ENST00000582788 Q5PR19 223 aa13.35□□□□□ -0.27
ERBB2-212ENST00000582788 AMMECR1LQ6DCA0 310 aa13.35□□□□□ -0.27
ERBB2-212ENST00000582788 VPS25Q9BRG1 176 aa13.35□□□□□ -0.27
ERBB2-212ENST00000582788 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.35□□□□□ -0.274e-7■■■■□ 19.8
ERBB2-212ENST00000582788 C2orf91Q6ZV80 131 aa13.35□□□□□ -0.27
ERBB2-212ENST00000582788 ITPR2Q14571 2701 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 IGKV2-40A0A087WW87 121 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-212ENST00000582788 A0A087X0K7 114 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 TMSB15BA0A087X1C1 80 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 TGFAP01135 160 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 IGKV2D-40P01614 121 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-212ENST00000582788 AMN1Q8IY45 258 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 FAM110DQ8TAY7 271 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-212ENST00000582788 PRELID3AQ96N28 172 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 THYN1Q9P016 225 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 G3V318 75 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 H3BUX3 64 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 LY6EQ16553 131 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 ERASQ7Z444 233 aa13.34□□□□□ -0.27
ERBB2-212ENST00000582788 ORMDL3Q8N138 153 aa13.33□□□□□ -0.28
ERBB2-212ENST00000582788 C21orf62Q9NYP8 219 aa13.33□□□□□ -0.28
ERBB2-212ENST00000582788 ABCA12Q86UK0 2595 aa13.33□□□□□ -0.28
ERBB2-212ENST00000582788 GAGE12BA1L429 117 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 CBY3A6NI87 242 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 IGHV3-23P01764 117 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 IGHV4-31P0DP07 118 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 FOXE3Q13461 319 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 MRPL51Q4U2R6 128 aaKnown RBP13.32□□□□□ -0.28
ERBB2-212ENST00000582788 PRR25Q96S07 402 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 CR1P17927 2039 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 LOC389332A0A1B0GUA5 103 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 A6NDX4 124 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 CYSRT1A8MQ03 144 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 FGF6P10767 208 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 RPL7P18124 248 aaKnown RBP13.32□□□□□ -0.28
ERBB2-212ENST00000582788 KRTAP1-3Q8IUG1 177 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 OR1N2Q8NGR9 330 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 APCP25054 2843 aa13.32□□□□□ -0.28
ERBB2-212ENST00000582788 FBLL1A6NHQ2 334 aaKnown RBP13.31□□□□□ -0.28
ERBB2-212ENST00000582788 J3QLI3 93 aa13.31□□□□□ -0.28
ERBB2-212ENST00000582788 KLK9Q2XQG4 91 aa13.31□□□□□ -0.28
ERBB2-212ENST00000582788 OR8A1Q8NGG7 326 aa13.31□□□□□ -0.28
ERBB2-212ENST00000582788 Q96MF0 132 aa13.31□□□□□ -0.28
ERBB2-212ENST00000582788 KLK9Q9UKQ9 250 aa13.31□□□□□ -0.28
ERBB2-212ENST00000582788 LGALS9BQ3B8N2 356 aa13.3□□□□□ -0.28
ERBB2-212ENST00000582788 TMEM97Q5BJF2 176 aa13.3□□□□□ -0.28
ERBB2-212ENST00000582788 LGALS9CQ6DKI2 356 aa13.3□□□□□ -0.28
ERBB2-212ENST00000582788 TRAV8-6A0A0B4J262 113 aa13.3□□□□□ -0.28
ERBB2-212ENST00000582788 C7orf71A4D174 169 aa13.3□□□□□ -0.28
ERBB2-212ENST00000582788 IGHG4P01861 327 aa13.3□□□□□ -0.28
ERBB2-212ENST00000582788 IGLC6P0CF74 106 aa13.3□□□□□ -0.28
ERBB2-212ENST00000582788 ZNF80P51504 273 aaPredicted RBP13.3□□□□□ -0.28
ERBB2-212ENST00000582788 GTF2H5Q6ZYL4 71 aa13.3□□□□□ -0.28
ERBB2-212ENST00000582788 CSTL1Q9H114 145 aa13.3□□□□□ -0.28
ERBB2-212ENST00000582788 SMAD5-AS1Q9Y6J3 95 aa13.3□□□□□ -0.28
ERBB2-212ENST00000582788 Q8TAT8 98 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 LINC00527Q9UJ94 153 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 NAV2Q8IVL1 2488 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 H3BRM9 83 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 HBDP02042 147 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 CTSGP08311 255 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 C15orf32Q32M92 178 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 UFSP1Q6NVU6 142 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 ZNF575Q86XF7 245 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 FER1L6-AS1Q8NA97 138 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 VGLL1Q99990 258 aa13.29□□□□□ -0.28
ERBB2-212ENST00000582788 A6NDN8 102 aa13.28□□□□□ -0.28
ERBB2-212ENST00000582788 SIVA1O15304 175 aa13.28□□□□□ -0.28
ERBB2-212ENST00000582788 CRIP2P52943 208 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-212ENST00000582788 C19orf54Q5BKX5 351 aa13.28□□□□□ -0.28
ERBB2-212ENST00000582788 RABAC1Q9UI14 185 aa13.28□□□□□ -0.28
ERBB2-212ENST00000582788 NPYP01303 97 aa13.27□□□□□ -0.28
ERBB2-212ENST00000582788 BMI1P35226 326 aa13.27□□□□□ -0.28
ERBB2-212ENST00000582788 SRSF2Q01130 221 aaKnown RBP13.27□□□□□ -0.28
ERBB2-212ENST00000582788 DEFB112Q30KQ8 113 aa13.27□□□□□ -0.28
ERBB2-212ENST00000582788 PRSS57Q6UWY2 283 aa13.27□□□□□ -0.28
ERBB2-212ENST00000582788 ZANQ9Y493 2812 aa13.27□□□□□ -0.29
ERBB2-212ENST00000582788 TRAV41A0A0B4J266 112 aa13.27□□□□□ -0.29
ERBB2-212ENST00000582788 GAGE10A6NGK3 116 aa13.27□□□□□ -0.29
ERBB2-212ENST00000582788 SMKR1H3BMG3 65 aa13.27□□□□□ -0.29
ERBB2-212ENST00000582788 SNAI2O43623 268 aa13.27□□□□□ -0.29
ERBB2-212ENST00000582788 HLA-DMBP28068 263 aa13.27□□□□□ -0.29
ERBB2-212ENST00000582788 CACNG7P62955 275 aa13.27□□□□□ -0.29
ERBB2-212ENST00000582788 OR9G4Q8NGQ1 327 aa13.27□□□□□ -0.29
ERBB2-212ENST00000582788 ZNF502Q8TBZ5 544 aa13.27□□□□□ -0.29
ERBB2-212ENST00000582788 C9orf118A6NHY6 69 aa13.26□□□□□ -0.29
ERBB2-212ENST00000582788 CKS2P33552 79 aa13.26□□□□□ -0.29
ERBB2-212ENST00000582788 BLCAPP62952 87 aa13.26□□□□□ -0.29
ERBB2-212ENST00000582788 TWIST1Q15672 202 aa13.26□□□□□ -0.29
ERBB2-212ENST00000582788 NPFFR1Q9GZQ6 430 aa13.26□□□□□ -0.29
ERBB2-212ENST00000582788 NOTCH2Q04721 2471 aa13.26□□□□□ -0.29
ERBB2-212ENST00000582788 SCGB2A1O75556 95 aa13.25□□□□□ -0.29
ERBB2-212ENST00000582788 IGHG2P01859 326 aa13.25□□□□□ -0.29
ERBB2-212ENST00000582788 FXYD7P58549 80 aa13.25□□□□□ -0.29
ERBB2-212ENST00000582788 IGFL4Q6B9Z1 124 aa13.25□□□□□ -0.29
ERBB2-212ENST00000582788 Q6ZS46 218 aa13.25□□□□□ -0.29
ERBB2-212ENST00000582788 BOD1L2Q8IYS8 172 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms