RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 Q96M85 177 aa2.79□□□□□ -1.96
SMG8-205ENST00000580798 B9D2Q9BPU9 175 aa2.79□□□□□ -1.96
SMG8-205ENST00000580798 UPK3BQ9BT76 320 aa2.79□□□□□ -1.96
SMG8-205ENST00000580798 GABARAPL1Q9H0R8 117 aa2.79□□□□□ -1.96
SMG8-205ENST00000580798 DYNLRB1Q9NP97 96 aa2.79□□□□□ -1.96
SMG8-205ENST00000580798 CCDC88AQ3V6T2 1871 aa2.79□□□□□ -1.96
SMG8-205ENST00000580798 PEAK1Q9H792 1746 aa2.79□□□□□ -1.96
SMG8-205ENST00000580798 LAMC1P11047 1609 aa2.79□□□□□ -1.96
SMG8-205ENST00000580798 CEP170Q5SW79 1584 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 DIP2BQ9P265 1576 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.78□□□□□ -1.96
SMG8-205ENST00000580798 MYH1P12882 1939 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 DENND4CQ5VZ89 1909 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 TRAV3A0A0B4J244 114 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 IGHV3-35A0A0C4DH35 117 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 LOC107984156A0A0G2JMH3 177 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 A6NED7 52 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 C17orf51A8MQB3 221 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 IBA57-AS1B1ANH7 110 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 SLC25A20O43772 301 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 MSMBP08118 114 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 COX8AP10176 69 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 ZNF816Q0VGE8 651 aaPredicted RBP2.78□□□□□ -1.96
SMG8-205ENST00000580798 RHOHQ15669 191 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 KISS1Q15726 138 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 Q1T7F1 81 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 S100A7L2Q5SY68 101 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 SLC48A1Q6P1K1 146 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 Q6ZQT7 251 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 CYP2G1PQ6ZSU1 146 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 ARL17AQ8IVW1 177 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 ZFAND2AQ8N6M9 145 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 CNEP1R1Q8N9A8 125 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 CCL4L1Q8NHW4 92 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 TMEM141Q96I45 108 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 TTTY13Q9BZ97 58 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 MANBALQ9NQG1 85 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 C8orf17Q9NRJ1 99 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 TRAPPC1Q9Y5R8 145 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 UBR2Q8IWV8 1755 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 KNDC1Q76NI1 1749 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 MADDQ8WXG6 1647 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 RNF17Q9BXT8 1623 aaKnown RBP2.78□□□□□ -1.96
SMG8-205ENST00000580798 CFAP74Q9C0B2 1584 aa2.78□□□□□ -1.96
SMG8-205ENST00000580798 HMGXB3Q12766 1538 aa2.78□□□□□ -1.97
SMG8-205ENST00000580798 CRB1P82279 1406 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 ECM29Q5VYK3 1845 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 CITO14578 2027 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 CHD3Q12873 2000 aaKnown RBP2.77□□□□□ -1.97
SMG8-205ENST00000580798 A0A1W2PQD3 144 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 KRTAP4-16G5E9R7 235 aaPredicted RBP2.77□□□□□ -1.97
SMG8-205ENST00000580798 IGHV3-23P01764 117 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 LINC00269Q8N2A0 174 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 TOMM5Q8N4H5 51 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 Q8N7P7 452 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 PFN4Q8NHR9 129 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 LINC01600Q96MT4 127 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 SLC50A1Q9BRV3 221 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 SCRT1Q9BWW7 348 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 PLA2G12AQ9BZM1 189 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 C11orf1Q9H5F2 150 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 ABCA8O94911 1581 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 ADAMTS9Q9P2N4 1935 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 NUP210LQ5VU65 1888 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 KCPQ6ZWJ8 1503 aa2.77□□□□□ -1.97
SMG8-205ENST00000580798 CROCCQ5TZA2 2017 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 DOCK6Q96HP0 2047 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 IGHV5-51A0A0C4DH38 117 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 IGHV5-10-1A0A0J9YXX1 117 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 TCRBV4S1A1TA0A5B7 111 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 hDV103S1A0JD37 113 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 A6NN06 94 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 BPY2O14599 106 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 SH2D1AO60880 128 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 IGLV2-23P01705 113 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 APCSP02743 223 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 IGHV1-8P0DP01 117 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 CCL3P10147 92 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 ZNF56Q15929 161 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 ESRGQ1W209 222 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 RNASE13Q5GAN3 156 aaKnown RBP2.76□□□□□ -1.97
SMG8-205ENST00000580798 ZFP2Q6ZN57 461 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 Q8N976 141 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 RETNLBQ9BQ08 111 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 CYP4F30PQ9H0H9 118 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 ARL2-SNX15V9GYD0 113 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 TRPM3Q9HCF6 1732 aaPredicted RBP2.76□□□□□ -1.97
SMG8-205ENST00000580798 LOXHD1Q8IVV2 1947 aa2.76□□□□□ -1.97
SMG8-205ENST00000580798 ABCA6Q8N139 1617 aa2.75□□□□□ -1.97
SMG8-205ENST00000580798 CC2D2AQ9P2K1 1620 aa2.75□□□□□ -1.97
SMG8-205ENST00000580798 ZSWIM8A7E2V4 1837 aa2.75□□□□□ -1.97
SMG8-205ENST00000580798 DIP2CQ9Y2E4 1556 aa2.75□□□□□ -1.97
SMG8-205ENST00000580798 LRRK1Q38SD2 2015 aa2.75□□□□□ -1.97
SMG8-205ENST00000580798 FANCMQ8IYD8 2048 aa2.75□□□□□ -1.97
SMG8-205ENST00000580798 NUP205Q92621 2012 aa2.75□□□□□ -1.97
SMG8-205ENST00000580798 ZNF638Q14966 1978 aaKnown RBP2.75□□□□□ -1.97
SMG8-205ENST00000580798 IGLV11-55A0A075B6I3 123 aa2.75□□□□□ -1.97
SMG8-205ENST00000580798 TRAV13-2A0A0B4J235 113 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms