RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 IGLV5-39A0A0G2JS06 123 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 CRYM-AS1A6NIL9 109 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 IGHV3-11P01762 117 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 C3orf79P0CE67 100 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 ZFP2Q6ZN57 461 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 LINC00643Q86TS7 51 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 CAMK2N2Q96S95 79 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 B9D2Q9BPU9 175 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 IL25Q9H293 177 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 MRPL35Q9NZE8 188 aaKnown RBP4.65□□□□□ -1.67
COPS3-216ENST00000579716 POLR1AO95602 1720 aaPredicted RBP4.65□□□□□ -1.67
COPS3-216ENST00000579716 ARFGEF2Q9Y6D5 1785 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 MAST1Q9Y2H9 1570 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 DOCK2Q92608 1830 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 DOCK1Q14185 1865 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 MYOM1P52179 1685 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 TRPM2O94759 1503 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 C16orf97H3BN30 126 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 BCE1O60756 84 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 PIRTP0C851 137 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 RHOHQ15669 191 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 Q1T7F1 81 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 ZNF791Q3KP31 576 aaPredicted RBP4.64□□□□□ -1.67
COPS3-216ENST00000579716 Q6ZRP5 223 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 BAGE3Q86Y29 109 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 BAGE2Q86Y30 109 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 TMEM256Q8N2U0 113 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 TOMM5Q8N4H5 51 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 TRAPPC1Q9Y5R8 145 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 MCM3APO60318 1980 aa4.64□□□□□ -1.67
COPS3-216ENST00000579716 IGLV4-3A0A075B6K6 122 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 IGHV1-24A0A0C4DH33 117 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 A0A1W2PQD3 144 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 RNASE2P10153 161 aaKnown RBP4.63□□□□□ -1.67
COPS3-216ENST00000579716 PEBP1P30086 187 aaKnown RBP4.63□□□□□ -1.67
COPS3-216ENST00000579716 FXYD7P58549 80 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 DYNLT1P63172 113 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 RBM3P98179 157 aaKnown RBP4.63□□□□□ -1.67
COPS3-216ENST00000579716 ZNF816Q0VGE8 651 aaPredicted RBP4.63□□□□□ -1.67
COPS3-216ENST00000579716 MRPL51Q4U2R6 128 aaKnown RBP4.63□□□□□ -1.67
COPS3-216ENST00000579716 C9orf66Q5T8R8 295 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 SPANXN1Q5VSR9 72 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 C2orf66Q6UXQ4 117 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 C2orf91Q6ZV80 131 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 CHCHD1Q96BP2 118 aaKnown RBP4.63□□□□□ -1.67
COPS3-216ENST00000579716 NABP2Q9BQ15 211 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 FGF23Q9GZV9 251 aaPredicted RBP4.63□□□□□ -1.67
COPS3-216ENST00000579716 HIGD1BQ9P298 99 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 KIAA1210Q9ULL0 1709 aa4.63□□□□□ -1.67
COPS3-216ENST00000579716 TANC1Q9C0D5 1861 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 EIF2AK4Q9P2K8 1649 aaKnown RBP4.62□□□□□ -1.67
COPS3-216ENST00000579716 CLTCQ00610 1675 aaKnown RBP4.62□□□□□ -1.67
COPS3-216ENST00000579716 IGHV3-72A0A0B4J1Y9 119 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 IGHV1OR15-9A0A0B4J2B8 117 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 IGHV3-16A0A0C4DH30 117 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 SRRM5B3KS81 715 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
COPS3-216ENST00000579716 SERF1AO75920 110 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 C9orf57Q5W0N0 161 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 IGFL3Q6UXB1 125 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 CYP2G1PQ6ZSU1 146 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 C6orf201Q7Z4U5 140 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 Q8N7P7 452 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 CYB561D1Q8N8Q1 229 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 PHLDA3Q9Y5J5 127 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 POLEQ07864 2286 aa4.62□□□□□ -1.67
COPS3-216ENST00000579716 CRYBG1Q9Y4K1 1723 aa4.61□□□□□ -1.67
COPS3-216ENST00000579716 TRBV6-7A0A0A0MS04 114 aa4.61□□□□□ -1.67
COPS3-216ENST00000579716 APCSP02743 223 aa4.61□□□□□ -1.67
COPS3-216ENST00000579716 TSPEAR-AS2P59090 65 aa4.61□□□□□ -1.67
COPS3-216ENST00000579716 C10orf25Q5T742 122 aa4.61□□□□□ -1.67
COPS3-216ENST00000579716 SLC48A1Q6P1K1 146 aa4.61□□□□□ -1.67
COPS3-216ENST00000579716 LINC00467Q9BRT7 94 aa4.61□□□□□ -1.67
COPS3-216ENST00000579716 SLC50A1Q9BRV3 221 aa4.61□□□□□ -1.67
COPS3-216ENST00000579716 THSD7BQ9C0I4 1608 aa4.61□□□□□ -1.67
COPS3-216ENST00000579716 COL5A3P25940 1745 aaPredicted RBP4.6□□□□□ -1.67
COPS3-216ENST00000579716 SIPA1L3O60292 1781 aaPredicted RBP4.6□□□□□ -1.67
COPS3-216ENST00000579716 PDCD11Q14690 1871 aaKnown RBP4.6□□□□□ -1.67
COPS3-216ENST00000579716 IGLV8-61A0A075B6I0 122 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 IGHV3-43A0A0B4J1X8 118 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 TRAV3A0A0B4J244 114 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 LY6G6EA0A0G2JKS1 128 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 TCRBV4S1A1TA0A5B7 111 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 K7ERS5 55 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 IGHV3-13P01766 116 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 DAZAP2Q15038 168 aaPredicted RBP4.6□□□□□ -1.67
COPS3-216ENST00000579716 KISS1Q15726 138 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 LYPD2Q6UXB3 125 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 C16orf47Q6ZP98 133 aaPredicted RBP4.6□□□□□ -1.67
COPS3-216ENST00000579716 NPBQ8NG41 125 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 DYNLRB1Q9NP97 96 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 PREX1Q8TCU6 1659 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 BTAF1O14981 1849 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 NUP98P52948 1817 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 TICRRQ7Z2Z1 1910 aa4.6□□□□□ -1.67
COPS3-216ENST00000579716 IGLV1-50A0A075B6I6 118 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 IGLV3-9A0A075B6K5 115 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 TRAV13-2A0A0B4J235 113 aa4.59□□□□□ -1.67
COPS3-216ENST00000579716 FXYD1O00168 92 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms