RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 RAB31Q13636 194 aa8.12□□□□□ -1.11
PRPF8-215ENST00000576958 LINC00477Q96M19 166 aa8.12□□□□□ -1.11
PRPF8-215ENST00000576958 HHLA3Q9XRX5 114 aa8.12□□□□□ -1.11
PRPF8-215ENST00000576958 RNF24Q9Y225 148 aa8.12□□□□□ -1.11
PRPF8-215ENST00000576958 S100A11P31949 105 aa8.11□□□□□ -1.11
PRPF8-215ENST00000576958 ERVFC1-1P60608 527 aa8.11□□□□□ -1.11
PRPF8-215ENST00000576958 IBA57Q5T440 356 aaKnown RBP8.11□□□□□ -1.11
PRPF8-215ENST00000576958 PRO0255Q9UI72 69 aa8.11□□□□□ -1.11
PRPF8-215ENST00000576958 IGHV3-16A0A0C4DH30 117 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 GNRH2O43555 120 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 H2AFB2P0C5Z0 115 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 NBEAP1P0C6P0 100 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 GYPEP15421 78 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 TMEM183BQ1AE95 376 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 LRRC37A5PQ49AS3 106 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 TMEM78Q5T7P6 136 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 TMEM183AQ8IXX5 376 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 OR5C1Q8NGR4 320 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 CHAC2Q8WUX2 184 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 ARPC5LQ9BPX5 153 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 OR51M1Q9H341 326 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 PRELID1Q9Y255 219 aa8.1□□□□□ -1.11
PRPF8-215ENST00000576958 TRGV4A0A0C4DH28 118 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 ZNF138P52744 262 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 RANP62826 216 aaKnown RBP8.09□□□□□ -1.11
PRPF8-215ENST00000576958 ZNF415Q09FC8 603 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 PDE6HQ13956 83 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 NEGR1Q7Z3B1 354 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 STX12Q86Y82 276 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 Q8N3U1 123 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 PAXXQ9BUH6 204 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 MRPL32Q9BYC8 188 aaKnown RBP8.09□□□□□ -1.11
PRPF8-215ENST00000576958 AAMDCQ9H7C9 122 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 PGPEP1Q9NXJ5 209 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 MSRB1Q9NZV6 116 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 FAM30AQ9NZY2 134 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 NAGKQ9UJ70 344 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 LY96Q9Y6Y9 160 aa8.09□□□□□ -1.11
PRPF8-215ENST00000576958 F6UZH7 168 aa8.08□□□□□ -1.12
PRPF8-215ENST00000576958 PVALBP20472 110 aaPredicted RBP8.08□□□□□ -1.12
PRPF8-215ENST00000576958 MRPL23Q16540 153 aaKnown RBP8.08□□□□□ -1.12
PRPF8-215ENST00000576958 TVP23CQ96ET8 276 aa8.08□□□□□ -1.12
PRPF8-215ENST00000576958 RPH3ALQ9UNE2 315 aa8.08□□□□□ -1.12
PRPF8-215ENST00000576958 LRCOL1A6NCL2 159 aa8.07□□□□□ -1.12
PRPF8-215ENST00000576958 SRIP30626 198 aa8.07□□□□□ -1.12
PRPF8-215ENST00000576958 HBG1P69891 147 aa8.07□□□□□ -1.12
PRPF8-215ENST00000576958 HBG2P69892 147 aa8.07□□□□□ -1.12
PRPF8-215ENST00000576958 WFDC2Q14508 124 aa8.07□□□□□ -1.12
PRPF8-215ENST00000576958 ZNF266Q14584 549 aa8.07□□□□□ -1.12
PRPF8-215ENST00000576958 SGK494Q96LW2 274 aa8.07□□□□□ -1.12
PRPF8-215ENST00000576958 HYLS1Q96M11 299 aa8.07□□□□□ -1.12
PRPF8-215ENST00000576958 WDR61Q9GZS3 305 aaKnown RBP8.07□□□□□ -1.12
PRPF8-215ENST00000576958 TRAV8-1A0A0A6YYK1 113 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 OR7C2O60412 319 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 CRYGDP07320 174 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 NMBP08949 121 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 GCSHP23434 173 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 GNG5P63218 68 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 ATP6V1FQ16864 119 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 Q6AWC8 147 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 DPPA3Q6W0C5 159 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 OR10G4Q8NGN3 311 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 SMIM3Q9BZL3 60 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 SLC25A31Q9H0C2 315 aa8.06□□□□□ -1.12
PRPF8-215ENST00000576958 IGHV3-73A0A0B4J1V6 119 aa8.05□□□□□ -1.12
PRPF8-215ENST00000576958 DIRC3C9JPN6 131 aa8.05□□□□□ -1.12
PRPF8-215ENST00000576958 UBE2L3P68036 154 aaKnown RBP8.05□□□□□ -1.12
PRPF8-215ENST00000576958 IFITM3Q01628 133 aa8.05□□□□□ -1.12
PRPF8-215ENST00000576958 CDPF1Q6NVV7 123 aa8.05□□□□□ -1.12
PRPF8-215ENST00000576958 RASL10AQ92737 203 aa8.05□□□□□ -1.12
PRPF8-215ENST00000576958 Q9HAA7 133 aa8.05□□□□□ -1.12
PRPF8-215ENST00000576958 WFDC1Q9HC57 220 aa8.05□□□□□ -1.12
PRPF8-215ENST00000576958 C11orf21Q9P2W6 132 aa8.05□□□□□ -1.12
PRPF8-215ENST00000576958 EREGO14944 169 aa8.04□□□□□ -1.12
PRPF8-215ENST00000576958 HMGB3O15347 200 aaKnown RBP8.04□□□□□ -1.12
PRPF8-215ENST00000576958 IFNA5P01569 189 aa8.04□□□□□ -1.12
PRPF8-215ENST00000576958 TYMSP04818 313 aa8.04□□□□□ -1.12
PRPF8-215ENST00000576958 H2BFSP57053 126 aa8.04□□□□□ -1.12
PRPF8-215ENST00000576958 CNPY1Q3B7I2 92 aa8.04□□□□□ -1.12
PRPF8-215ENST00000576958 FFAR4Q5NUL3 377 aa8.04□□□□□ -1.12
PRPF8-215ENST00000576958 TMEM75Q8N9X5 138 aa8.04□□□□□ -1.12
PRPF8-215ENST00000576958 FRZBQ92765 325 aa8.04□□□□□ -1.12
PRPF8-215ENST00000576958 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
PRPF8-215ENST00000576958 IGLV5-52A0A0A0MRZ9 124 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 TRAV4A0A0B4J268 109 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 FAM240BA0A1B0GVZ2 78 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 IGHV3-30P01768 117 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 IGHV3-33P01772 117 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 IGHV3-30-3P0DP02 117 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 IGHV3-30-5P0DP03 117 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 ZNF80P51504 273 aaPredicted RBP8.03□□□□□ -1.12
PRPF8-215ENST00000576958 GOLT1AQ6ZVE7 132 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 NFE4Q86UQ8 179 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 IQCF2Q8IXL9 164 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 OR4C5Q8NGB2 326 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 Q9UF83 564 aa8.03□□□□□ -1.12
PRPF8-215ENST00000576958 C9JCJ5 164 aa8.02□□□□□ -1.13
PRPF8-215ENST00000576958 GATA1P15976 413 aaPredicted RBP8.02□□□□□ -1.13
PRPF8-215ENST00000576958 EVI2AP22794 236 aa8.02□□□□□ -1.13
PRPF8-215ENST00000576958 LINC01620Q4KN68 170 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms