RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PRSS1P07477 247 aa14.69□□□□□ -0.06
SCARF1-206ENST00000573852 FAM110DQ8TAY7 271 aaPredicted RBP14.69□□□□□ -0.06
SCARF1-206ENST00000573852 PIFOQ8TCI5 191 aa14.69□□□□□ -0.06
SCARF1-206ENST00000573852 TMEM158Q8WZ71 300 aa14.69□□□□□ -0.06
SCARF1-206ENST00000573852 K7ERU9 68 aa14.68□□□□□ -0.06
SCARF1-206ENST00000573852 TRGV3P03979 118 aa14.68□□□□□ -0.06
SCARF1-206ENST00000573852 FOXC1Q12948 553 aa14.68□□□□□ -0.06
SCARF1-206ENST00000573852 MUC6Q6W4X9 2439 aa14.68□□□□□ -0.06
SCARF1-206ENST00000573852 RBAKDNA6NC62 111 aa14.67□□□□□ -0.06
SCARF1-206ENST00000573852 OR2K2Q8NGT1 345 aa14.67□□□□□ -0.06
SCARF1-206ENST00000573852 IGLV2-18A0A075B6J9 118 aa14.67□□□□□ -0.06
SCARF1-206ENST00000573852 IGHV3-49A0A0A0MS15 119 aa14.67□□□□□ -0.06
SCARF1-206ENST00000573852 ATP6V0E1O15342 81 aa14.67□□□□□ -0.06
SCARF1-206ENST00000573852 RIPPLY3P57055 190 aa14.66□□□□□ -0.06
SCARF1-206ENST00000573852 ADORA2A-AS1P86434 159 aa14.66□□□□□ -0.06
SCARF1-206ENST00000573852 CLEC19AQ6UXS0 136 aa14.66□□□□□ -0.06
SCARF1-206ENST00000573852 CCDC140Q96MF4 163 aa14.66□□□□□ -0.06
SCARF1-206ENST00000573852 FOXC2Q99958 501 aa14.66□□□□□ -0.06
SCARF1-206ENST00000573852 SIRPDQ9H106 197 aa14.66□□□□□ -0.06
SCARF1-206ENST00000573852 TRAV8-2A0A0B4J237 113 aa14.66□□□□□ -0.06
SCARF1-206ENST00000573852 Q6ZQT7 251 aa14.66□□□□□ -0.06
SCARF1-206ENST00000573852 Q8N8P6 123 aa14.66□□□□□ -0.06
SCARF1-206ENST00000573852 AJUBAQ96IF1 538 aa14.66□□□□□ -0.06
SCARF1-206ENST00000573852 LINC01548A6NM66 108 aa14.65□□□□□ -0.06
SCARF1-206ENST00000573852 GOSR1O95249 250 aa14.65□□□□□ -0.06
SCARF1-206ENST00000573852 IGKCP01834 107 aa14.65□□□□□ -0.06
SCARF1-206ENST00000573852 SLC50A1Q9BRV3 221 aa14.65□□□□□ -0.06
SCARF1-206ENST00000573852 MEGF9Q9H1U4 602 aa14.65□□□□□ -0.06
SCARF1-206ENST00000573852 A0A1W2PPM0 123 aa14.65□□□□□ -0.06
SCARF1-206ENST00000573852 G3V318 75 aa14.65□□□□□ -0.06
SCARF1-206ENST00000573852 ZNF207O43670 478 aaKnown RBP14.65□□□□□ -0.06
SCARF1-206ENST00000573852 RAB9AP51151 201 aa14.65□□□□□ -0.06
SCARF1-206ENST00000573852 GTSCR1Q86UQ5 136 aa14.64□□□□□ -0.07
SCARF1-206ENST00000573852 TRAV26-2A0A0B4J265 109 aa14.64□□□□□ -0.07
SCARF1-206ENST00000573852 FXYD2P54710 66 aa14.64□□□□□ -0.07
SCARF1-206ENST00000573852 IGHV7-4-1A0A0J9YVY3 117 aa14.63□□□□□ -0.07
SCARF1-206ENST00000573852 GCSHP23434 173 aa14.63□□□□□ -0.07
SCARF1-206ENST00000573852 SMIM17P0DL12 118 aa14.63□□□□□ -0.07
SCARF1-206ENST00000573852 KLK9Q2XQG4 91 aa14.63□□□□□ -0.07
SCARF1-206ENST00000573852 KLK9Q9UKQ9 250 aa14.63□□□□□ -0.07
SCARF1-206ENST00000573852 TMEM8BA6NDV4 472 aa14.62□□□□□ -0.07
SCARF1-206ENST00000573852 NBL1P41271 181 aa14.62□□□□□ -0.07
SCARF1-206ENST00000573852 NRACQ8N912 160 aa14.62□□□□□ -0.07
SCARF1-206ENST00000573852 HIGD1BQ9P298 99 aa14.62□□□□□ -0.07
SCARF1-206ENST00000573852 SPCS1Q9Y6A9 102 aa14.62□□□□□ -0.07
SCARF1-206ENST00000573852 DPM2O94777 84 aa14.62□□□□□ -0.07
SCARF1-206ENST00000573852 TMEM78Q5T7P6 136 aa14.62□□□□□ -0.07
SCARF1-206ENST00000573852 ZC2HC1BQ5TFG8 222 aa14.62□□□□□ -0.07
SCARF1-206ENST00000573852 CHAC1Q9BUX1 264 aa14.62□□□□□ -0.07
SCARF1-206ENST00000573852 SMIM13P0DJ93 91 aa14.61□□□□□ -0.07
SCARF1-206ENST00000573852 C8orf86Q6ZUL3 223 aa14.61□□□□□ -0.07
SCARF1-206ENST00000573852 TMEM238C9JI98 176 aa14.61□□□□□ -0.07
SCARF1-206ENST00000573852 ATP5LO75964 103 aa14.61□□□□□ -0.07
SCARF1-206ENST00000573852 PSMG4Q5JS54 123 aa14.61□□□□□ -0.07
SCARF1-206ENST00000573852 UFC1Q9Y3C8 167 aa14.61□□□□□ -0.07
SCARF1-206ENST00000573852 TRBV25-1A0A075B6N4 114 aa14.6□□□□□ -0.07
SCARF1-206ENST00000573852 TMEM160Q9NX00 188 aa14.6□□□□□ -0.07
SCARF1-206ENST00000573852 SMPXQ9UHP9 88 aa14.6□□□□□ -0.07
SCARF1-206ENST00000573852 TRAV40A0A0B4J280 105 aa14.6□□□□□ -0.07
SCARF1-206ENST00000573852 MRPL35Q9NZE8 188 aaKnown RBP14.6□□□□□ -0.07
SCARF1-206ENST00000573852 ZFHX3Q15911 3703 aa14.6□□□□□ -0.07
SCARF1-206ENST00000573852 A0A1W2PPR1 153 aa14.59□□□□□ -0.07
SCARF1-206ENST00000573852 SAA4P35542 130 aa14.59□□□□□ -0.07
SCARF1-206ENST00000573852 UBE2E1P51965 193 aa14.59□□□□□ -0.07
SCARF1-206ENST00000573852 SAMD5Q5TGI4 173 aa14.59□□□□□ -0.07
SCARF1-206ENST00000573852 K7ERJ3 54 aa14.59□□□□□ -0.07
SCARF1-206ENST00000573852 LAGE3Q14657 143 aa14.59□□□□□ -0.07
SCARF1-206ENST00000573852 METTL26Q96S19 204 aa14.59□□□□□ -0.07
SCARF1-206ENST00000573852 ATRXP46100 2492 aa14.59□□□□□ -0.07
SCARF1-206ENST00000573852 C9orf47Q6ZRZ4 202 aa14.59□□□□□ -0.07
SCARF1-206ENST00000573852 NEGR1Q7Z3B1 354 aa14.59□□□□□ -0.07
SCARF1-206ENST00000573852 PRSS47A8MTI9 375 aa14.58□□□□□ -0.08
SCARF1-206ENST00000573852 G3V4G9 280 aa14.58□□□□□ -0.08
SCARF1-206ENST00000573852 FABP2P12104 132 aa14.58□□□□□ -0.08
SCARF1-206ENST00000573852 OR5A1Q8NGJ0 315 aa14.58□□□□□ -0.08
SCARF1-206ENST00000573852 EEF1AKMT3Q96AZ1 226 aa14.58□□□□□ -0.08
SCARF1-206ENST00000573852 MYOZ3Q8TDC0 251 aa14.58□□□□□ -0.08
SCARF1-206ENST00000573852 K7EMI3 77 aa14.57□□□□□ -0.08
SCARF1-206ENST00000573852 PRR9Q5T870 116 aa14.57□□□□□ -0.08
SCARF1-206ENST00000573852 SPANXN1Q5VSR9 72 aa14.57□□□□□ -0.08
SCARF1-206ENST00000573852 MAPKAPK5-AS1Q8N8E1 139 aa14.57□□□□□ -0.08
SCARF1-206ENST00000573852 MRPL53Q96EL3 112 aaKnown RBP14.57□□□□□ -0.08
SCARF1-206ENST00000573852 U3KQE9 123 aa14.57□□□□□ -0.08
SCARF1-206ENST00000573852 SPTBN1Q01082 2364 aaKnown RBP14.57□□□□□ -0.08
SCARF1-206ENST00000573852 PHLDA1Q8WV24 401 aaPredicted RBP14.57□□□□□ -0.08
SCARF1-206ENST00000573852 EFNA4P52798 201 aa14.56□□□□□ -0.08
SCARF1-206ENST00000573852 IGHV4-4A0A075B6R2 117 aa14.56□□□□□ -0.08
SCARF1-206ENST00000573852 TRBV7-1A0A0A6YYK4 115 aa14.56□□□□□ -0.08
SCARF1-206ENST00000573852 CENPVL3A0A0U1RRI6 287 aa14.56□□□□□ -0.08
SCARF1-206ENST00000573852 H3BVH4 76 aa14.56□□□□□ -0.08
SCARF1-206ENST00000573852 IGF1P05019 195 aa14.56□□□□□ -0.08
SCARF1-206ENST00000573852 HIF1ANQ9NWT6 349 aa14.56□□□□□ -0.08
SCARF1-206ENST00000573852 CEND1Q8N111 149 aa14.55□□□□□ -0.08
SCARF1-206ENST00000573852 TM2D2Q9BX73 214 aa14.55□□□□□ -0.08
SCARF1-206ENST00000573852 NHP2Q9NX24 153 aaKnown RBP14.55□□□□□ -0.08
SCARF1-206ENST00000573852 A0A087WX48 190 aa14.54□□□□□ -0.08
SCARF1-206ENST00000573852 C20orf173Q96LM9 149 aa14.54□□□□□ -0.08
SCARF1-206ENST00000573852 IGF2RP11717 2491 aa14.54□□□□□ -0.08
SCARF1-206ENST00000573852 SPRY2O43597 315 aa14.54□□□□□ -0.08
SCARF1-206ENST00000573852 SRSF1Q07955 248 aaKnown RBP eCLIP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms