RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 CDPF1Q6NVV7 123 aa14.92□□□□□ -0.02
SNF8-216ENST00000573795 DMBT1Q9UGM3 2413 aaPredicted RBP14.91□□□□□ -0.02
SNF8-216ENST00000573795 A0A087WTM6 91 aa14.91□□□□□ -0.02
SNF8-216ENST00000573795 ZNF138P52744 262 aa14.91□□□□□ -0.02
SNF8-216ENST00000573795 KRTAP10-1P60331 282 aa14.91□□□□□ -0.02
SNF8-216ENST00000573795 ZNF415Q09FC8 603 aa14.91□□□□□ -0.02
SNF8-216ENST00000573795 SLAQ13239 276 aa14.91□□□□□ -0.02
SNF8-216ENST00000573795 MRPL23Q16540 153 aaKnown RBP14.91□□□□□ -0.02
SNF8-216ENST00000573795 OR51M1Q9H341 326 aa14.91□□□□□ -0.02
SNF8-216ENST00000573795 MDFICQ9P1T7 246 aa14.91□□□□□ -0.02
SNF8-216ENST00000573795 TRBV7-9A0A0J9YWB2 115 aa14.9□□□□□ -0.02
SNF8-216ENST00000573795 OR10J4P0C629 311 aa14.9□□□□□ -0.02
SNF8-216ENST00000573795 NEGR1Q7Z3B1 354 aa14.9□□□□□ -0.02
SNF8-216ENST00000573795 WFDC10BQ8IUB3 73 aa14.9□□□□□ -0.02
SNF8-216ENST00000573795 OR5C1Q8NGR4 320 aa14.9□□□□□ -0.02
SNF8-216ENST00000573795 MRPL32Q9BYC8 188 aaKnown RBP14.9□□□□□ -0.02
SNF8-216ENST00000573795 K7EQD1 137 aa14.89□□□□□ -0.03
SNF8-216ENST00000573795 EREGO14944 169 aa14.89□□□□□ -0.03
SNF8-216ENST00000573795 SFTA3P0C7M3 94 aa14.89□□□□□ -0.03
SNF8-216ENST00000573795 ZNF266Q14584 549 aa14.89□□□□□ -0.03
SNF8-216ENST00000573795 MUC21Q5SSG8 566 aa14.89□□□□□ -0.03
SNF8-216ENST00000573795 NFE4Q86UQ8 179 aa14.89□□□□□ -0.03
SNF8-216ENST00000573795 ZNF479Q96JC4 524 aa14.89□□□□□ -0.03
SNF8-216ENST00000573795 PAXXQ9BUH6 204 aa14.89□□□□□ -0.03
SNF8-216ENST00000573795 LY96Q9Y6Y9 160 aa14.88□□□□□ -0.03
SNF8-216ENST00000573795 E5RGE8 158 aa14.87□□□□□ -0.03
SNF8-216ENST00000573795 IQCF2Q8IXL9 164 aa14.87□□□□□ -0.03
SNF8-216ENST00000573795 OR10G4Q8NGN3 311 aa14.87□□□□□ -0.03
SNF8-216ENST00000573795 PTTG2Q9NZH5 202 aa14.87□□□□□ -0.03
SNF8-216ENST00000573795 OR5AC2Q9NZP5 309 aa14.87□□□□□ -0.03
SNF8-216ENST00000573795 TRGV4A0A0C4DH28 118 aa14.86□□□□□ -0.03
SNF8-216ENST00000573795 H0YIZ8 118 aa14.86□□□□□ -0.03
SNF8-216ENST00000573795 INAFM2P0DMQ5 153 aa14.86□□□□□ -0.03
SNF8-216ENST00000573795 Q5VSD8 79 aa14.86□□□□□ -0.03
SNF8-216ENST00000573795 Q6AWC8 147 aa14.86□□□□□ -0.03
SNF8-216ENST00000573795 RASL10AQ92737 203 aa14.86□□□□□ -0.03
SNF8-216ENST00000573795 WDR61Q9GZS3 305 aaKnown RBP14.86□□□□□ -0.03
SNF8-216ENST00000573795 RBAKDNA6NC62 111 aa14.85□□□□□ -0.03
SNF8-216ENST00000573795 SIX6O95475 246 aa14.85□□□□□ -0.03
SNF8-216ENST00000573795 SRIP30626 198 aa14.85□□□□□ -0.03
SNF8-216ENST00000573795 CCDC32Q9BV29 185 aa14.85□□□□□ -0.03
SNF8-216ENST00000573795 MSRB1Q9NZV6 116 aa14.85□□□□□ -0.03
SNF8-216ENST00000573795 SRRM2Q9UQ35 2752 aaKnown RBP14.85□□□□□ -0.03
SNF8-216ENST00000573795 FAM240BA0A1B0GVZ2 78 aa14.84□□□□□ -0.03
SNF8-216ENST00000573795 GYPEP15421 78 aa14.84□□□□□ -0.03
SNF8-216ENST00000573795 RANP62826 216 aaKnown RBP14.84□□□□□ -0.03
SNF8-216ENST00000573795 TMEM183BQ1AE95 376 aa14.84□□□□□ -0.03
SNF8-216ENST00000573795 TMEM183AQ8IXX5 376 aa14.84□□□□□ -0.03
SNF8-216ENST00000573795 TRAV9-2A0A087WT02 112 aa14.83□□□□□ -0.04
SNF8-216ENST00000573795 SLC25A31Q9H0C2 315 aa14.83□□□□□ -0.04
SNF8-216ENST00000573795 OR7C2O60412 319 aa14.82□□□□□ -0.04
SNF8-216ENST00000573795 SPXQ9BT56 116 aa14.82□□□□□ -0.04
SNF8-216ENST00000573795 KCNIP2Q9NS61 270 aa14.82□□□□□ -0.04
SNF8-216ENST00000573795 DIRC3C9JPN6 131 aa14.81□□□□□ -0.04
SNF8-216ENST00000573795 K7EP13 123 aa14.81□□□□□ -0.04
SNF8-216ENST00000573795 CSN1S1P47710 185 aa14.81□□□□□ -0.04
SNF8-216ENST00000573795 UBE2L3P68036 154 aaKnown RBP14.81□□□□□ -0.04
SNF8-216ENST00000573795 LRRC37A5PQ49AS3 106 aa14.81□□□□□ -0.04
SNF8-216ENST00000573795 NMES1Q9C002 83 aa14.81□□□□□ -0.04
SNF8-216ENST00000573795 LENEPQ9Y5L5 61 aa14.81□□□□□ -0.04
SNF8-216ENST00000573795 FLG2Q5D862 2391 aaPredicted RBP14.8□□□□□ -0.04
SNF8-216ENST00000573795 TRGV11A0A075B6L2 103 aa14.8□□□□□ -0.04
SNF8-216ENST00000573795 LOC100131303A0A0U1RQF7 123 aa14.8□□□□□ -0.04
SNF8-216ENST00000573795 IFNA5P01569 189 aa14.8□□□□□ -0.04
SNF8-216ENST00000573795 ORM1P02763 201 aa14.8□□□□□ -0.04
SNF8-216ENST00000573795 EVI2AP22794 236 aa14.8□□□□□ -0.04
SNF8-216ENST00000573795 TDRG1Q3Y452 100 aa14.8□□□□□ -0.04
SNF8-216ENST00000573795 PCNPQ8WW12 178 aaKnown RBP14.8□□□□□ -0.04
SNF8-216ENST00000573795 TRAV4A0A0B4J268 109 aa14.79□□□□□ -0.04
SNF8-216ENST00000573795 EIF3GO75821 320 aaKnown RBP eCLIP14.79□□□□□ -0.04
SNF8-216ENST00000573795 ASAH1Q13510 395 aa14.79□□□□□ -0.04
SNF8-216ENST00000573795 FAM159AQ6UWV7 190 aa14.79□□□□□ -0.04
SNF8-216ENST00000573795 FRZBQ92765 325 aa14.79□□□□□ -0.04
SNF8-216ENST00000573795 CRYGDP07320 174 aa14.78□□□□□ -0.04
SNF8-216ENST00000573795 GCSHP23434 173 aa14.78□□□□□ -0.04
SNF8-216ENST00000573795 TMED6Q8WW62 240 aa14.78□□□□□ -0.04
SNF8-216ENST00000573795 TXNDC17Q9BRA2 123 aa14.78□□□□□ -0.04
SNF8-216ENST00000573795 IGHV3-16A0A0C4DH30 117 aa14.77□□□□□ -0.05
SNF8-216ENST00000573795 C9JCJ5 164 aa14.77□□□□□ -0.05
SNF8-216ENST00000573795 C17orf112F2Z3M2 114 aa14.77□□□□□ -0.05
SNF8-216ENST00000573795 GNRH2O43555 120 aa14.77□□□□□ -0.05
SNF8-216ENST00000573795 SMR3BP02814 79 aaPredicted RBP14.77□□□□□ -0.05
SNF8-216ENST00000573795 HAMPP81172 84 aa14.77□□□□□ -0.05
SNF8-216ENST00000573795 FFAR4Q5NUL3 377 aa14.77□□□□□ -0.05
SNF8-216ENST00000573795 MZT2BQ6NZ67 158 aa14.77□□□□□ -0.05
SNF8-216ENST00000573795 ATP5SQ99766 215 aa14.77□□□□□ -0.05
SNF8-216ENST00000573795 NAGKQ9UJ70 344 aa14.77□□□□□ -0.05
SNF8-216ENST00000573795 LRCOL1A6NCL2 159 aa14.76□□□□□ -0.05
SNF8-216ENST00000573795 OR4C5Q8NGB2 326 aa14.76□□□□□ -0.05
SNF8-216ENST00000573795 TVP23CQ96ET8 276 aa14.76□□□□□ -0.05
SNF8-216ENST00000573795 M0R2P5 195 aa14.75□□□□□ -0.05
SNF8-216ENST00000573795 H2BFSP57053 126 aa14.75□□□□□ -0.05
SNF8-216ENST00000573795 KHDC3LQ587J8 217 aa14.75□□□□□ -0.05
SNF8-216ENST00000573795 C10orf126Q8N4M7 172 aa14.75□□□□□ -0.05
SNF8-216ENST00000573795 HYLS1Q96M11 299 aa14.75□□□□□ -0.05
SNF8-216ENST00000573795 TYMSP04818 313 aa14.74□□□□□ -0.05
SNF8-216ENST00000573795 GATA1P15976 413 aaPredicted RBP14.74□□□□□ -0.05
SNF8-216ENST00000573795 TIRAPP58753 221 aa14.74□□□□□ -0.05
SNF8-216ENST00000573795 OTORQ9NRC9 128 aa14.74□□□□□ -0.05
SNF8-216ENST00000573795 NDUFA13Q9P0J0 144 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms