RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 AKAP6Q13023 2319 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 PRRC2CQ9Y520 2896 aaKnown RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 TRGV10A0A0A0MS01 117 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 IGLV9-49A0A0B4J1Y8 123 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 C3orf85A0A1B0GTC6 90 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 TMEM262E9PQX1 116 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 TMEM250H0YL14 139 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 H3BQ15 152 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 PSPHP1O15172 72 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 IGKV1-39P01597 117 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 IGKV1D-39P04432 117 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 FABP4P15090 132 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 COL8A2P25067 703 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 RPS10P46783 165 aaKnown RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 EDDM3BP56851 147 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 RPL30P62888 115 aaKnown RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 HERVK_113P63121 156 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 SRSF3P84103 164 aaKnown RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 ERCC8Q13216 396 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 EIF4EBP1Q13541 118 aaPredicted RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 RRN3P1Q2M238 152 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 COA6Q5JTJ3 125 aaKnown RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 Q6AWC8 147 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 MRPL54Q6P161 138 aaKnown RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 Q6ZSV7 163 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 ODF3L1Q8IXM7 274 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 DRAM1Q8N682 238 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 OR10J6PQ8NGY7 276 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 SGMS2Q8NHU3 365 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 NTN5Q8WTR8 489 aaPredicted RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 ITLN2Q8WWU7 325 aaPredicted RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 LSM10Q969L4 123 aaKnown RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 RAB37Q96AX2 223 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 DPH3Q96FX2 82 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 YPEL4Q96NS1 127 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 IMMP2LQ96T52 175 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 TM2D3Q9BRN9 247 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 DYNLRB1Q9NP97 96 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 TIMM9Q9Y5J7 89 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 RELNP78509 3460 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 TLN1Q9Y490 2541 aaKnown RBP2.72□□□□□ -1.97
SMG6-208ENST00000570874 NAV3Q8IVL0 2385 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 MED13LQ71F56 2210 aa2.72□□□□□ -1.97
SMG6-208ENST00000570874 HRNRQ86YZ3 2850 aaPredicted RBP2.71□□□□□ -1.97
SMG6-208ENST00000570874 SPTA1P02549 2419 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 KALRNO60229 2985 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 NCOR2Q9Y618 2525 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 TRAV9-1A0A075B6T8 112 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 IGHV2-26A0A0B4J1V2 119 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 TRBV7-6A0A0J9YX20 115 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 ODAMA1E959 279 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 OR2T8A6NH00 312 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 C17orf98A8MV24 154 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 MGST3O14880 152 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 UBE2L6O14933 153 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 CD5LO43866 347 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 PROP1O75360 226 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 TRGC2P03986 189 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 SRP19P09132 144 aaKnown RBP2.71□□□□□ -1.98
SMG6-208ENST00000570874 CGB3P0DN86 165 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 CGB7P0DN87 165 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 IGHV4-30-4P0DP06 118 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 CCL3L1P16619 93 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 MP68P56378 58 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 BRWD1-AS2P59051 145 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 ZNF90Q03938 601 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 ZNF816Q0VGE8 651 aaPredicted RBP2.71□□□□□ -1.98
SMG6-208ENST00000570874 ELOBQ15370 118 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 RPL39P5Q59GN2 51 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 Q6ZRM9 215 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 TMEM183AQ8IXX5 376 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 C1orf174Q8IYL3 243 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 TMEM252Q8N6L7 170 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 ZNF709Q8N972 641 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 C11orf72Q8NBR9 251 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 OR4X2Q8NGF9 303 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 OR10G8Q8NGN5 311 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 OR2T10Q8NGZ9 312 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 FAM213BQ8TBF2 198 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 SCGB1C1Q8TD33 95 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 IGFBPL1Q8WX77 278 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 COPS9Q8WXC6 57 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 RNF185Q96GF1 192 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 RITA1Q96K30 269 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 HIST1H2BLQ99880 126 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 PYGO2Q9BRQ0 406 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 TMEM204Q9BSN7 226 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 C11orf1Q9H5F2 150 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 OTORQ9NRC9 128 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 TMEM106BQ9NUM4 274 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 XCL2Q9UBD3 114 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 DCHS2Q6V1P9 2916 aa2.71□□□□□ -1.98
SMG6-208ENST00000570874 TPRP12270 2363 aaKnown RBP2.71□□□□□ -1.98
SMG6-208ENST00000570874 LOC389332A0A1B0GUA5 103 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 FAM236AA0A1B0GUQ0 79 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 FAM236BA0A1B0GV22 79 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 FAM24AA6NFZ4 105 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 A8MWV9 139 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 C9JQL5 133 aa2.7□□□□□ -1.98
SMG6-208ENST00000570874 UQCRQO14949 82 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms