RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ZMAT4Q9H898 229 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 FLNCQ14315 2725 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 CFAP46Q8IYW2 2715 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 UTP20O75691 2785 aaKnown RBP6.8□□□□□ -1.32
LINC00558-201ENST00000569422 IGKV3-7A0A075B6H7 116 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 PRAC2D3DTV9 90 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 NPIPB6E9PJ23 425 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 SMKR1H3BMG3 65 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 RIGQ13278 110 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 PRSS3P2Q8NHM4 247 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 MYO18BQ8IUG5 2567 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 POLQO75417 2590 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 ACACBO00763 2458 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 TRAV40A0A0B4J280 105 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 NPFFO15130 113 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 AZU1P20160 251 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 ZNF80P51504 273 aaPredicted RBP6.79□□□□□ -1.32
LINC00558-201ENST00000569422 AMN1Q8IY45 258 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 TMEM70Q9BUB7 260 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 CSPG4Q6UVK1 2322 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 CENPVL3A0A0U1RRI6 287 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 hDV102S1A0JD36 115 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 C2orf70A6NJV1 201 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 IGHV4-39P01824 125 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 IGLC3P0DOY3 106 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 HINT1P49773 126 aaPredicted RBP6.79□□□□□ -1.32
LINC00558-201ENST00000569422 FAM106AQ4KMX7 169 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 LYPD1Q8N2G4 141 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 GFRA4Q9GZZ7 299 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 FAM208BQ5VWN6 2430 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 TMEM89A2RUT3 159 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 OR4C46A6NHA9 309 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 G3V4G9 280 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 HAX1O00165 279 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 IGLL1P15814 213 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 TWIST1Q15672 202 aa6.79□□□□□ -1.32
LINC00558-201ENST00000569422 D6R8Y8 96 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 NCR2O95944 276 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 CTRLP40313 264 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 PSG9Q00887 426 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 LCNL1Q6ZST4 164 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 Q6ZVH6 145 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 WFDC3Q8IUB2 231 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 KIR2DL5BQ8NHK3 375 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 PRR25Q96S07 402 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 UQCR10Q9UDW1 63 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 OOSP1A8MZH6 123 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 IGHV3-11P01762 117 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 GATA3P23771 443 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 EBI3Q14213 229 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 FAM162BQ5T6X4 162 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 AJUBAQ96IF1 538 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 MSRB1Q9NZV6 116 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 CELSR2Q9HCU4 2923 aa6.78□□□□□ -1.32
LINC00558-201ENST00000569422 USP9YO00507 2555 aaPredicted RBP6.78□□□□□ -1.32
LINC00558-201ENST00000569422 IGHV4-61A0A0C4DH41 118 aa6.77□□□□□ -1.32
LINC00558-201ENST00000569422 IFI27P40305 119 aaPredicted RBP6.77□□□□□ -1.32
LINC00558-201ENST00000569422 LOXL1Q08397 574 aaPredicted RBP6.77□□□□□ -1.32
LINC00558-201ENST00000569422 FA2HQ7L5A8 372 aa6.77□□□□□ -1.32
LINC00558-201ENST00000569422 GAGE5Q13069 117 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 GAGE6Q13070 117 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 PDE6HQ13956 83 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 KLHDC1Q8N7A1 406 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 OR8A1Q8NGG7 326 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 ZNF502Q8TBZ5 544 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 CCDC140Q96MF4 163 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 JMJD8Q96S16 334 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 SPAG8Q99932 426 aaPredicted RBP6.77□□□□□ -1.33
LINC00558-201ENST00000569422 USP9XQ93008 2570 aaPredicted RBP6.77□□□□□ -1.33
LINC00558-201ENST00000569422 FAM231BA6NCW3 169 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 SYS1-DBNDD2H3BUS1 97 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 RPL11P62913 178 aaKnown RBP6.77□□□□□ -1.33
LINC00558-201ENST00000569422 IL17RELQ6ZVW7 336 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 ZNF738Q8NE65 137 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 NDFIP1Q9BT67 221 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 AP5S1Q9NUS5 200 aa6.77□□□□□ -1.33
LINC00558-201ENST00000569422 TRAV9-2A0A087WT02 112 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 IGHG4P01861 327 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 IGHV4-38-2P0DP08 117 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 DEFB1P60022 68 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 Q6ZQT7 251 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 OR1N2Q8NGR9 330 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 OVOL3O00110 214 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 SPRY2O43597 315 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 BUB3O43684 328 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 TRGV3P03979 118 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 OR5AL1P0C617 328 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 C6orf226Q5I0X4 101 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 KHDC1LQ5JSQ8 128 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 STPG4Q8N801 248 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 CCL19Q99731 98 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 PRORYQ9H606 182 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 LAMTOR2Q9Y2Q5 125 aa6.76□□□□□ -1.33
LINC00558-201ENST00000569422 TRBV12-3P01733 135 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 ATP5G2Q06055 141 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 FER1L6-AS1Q8NA97 138 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 CHCHD1Q96BP2 118 aaKnown RBP6.75□□□□□ -1.33
LINC00558-201ENST00000569422 PRELID3AQ96N28 172 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 SIGMAR1Q99720 223 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 TSPOP30536 169 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms