RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 PAXXQ9BUH6 204 aa13.09□□□□□ -0.31
GTF3C1-207ENST00000567806 TMEM167BQ9NRX6 74 aa13.09□□□□□ -0.31
GTF3C1-207ENST00000567806 J3KRW8 73 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 SLC17A3O00476 420 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 STAG3L2P0CL84 134 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 STAG3L3P0CL85 134 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 FAM74A1Q5RGS3 127 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 MORN5Q5VZ52 161 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 MIR17HGQ75NE6 70 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 LYPD1Q8N2G4 141 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 LINC00612Q8N6U2 182 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 TMED6Q8WW62 240 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 RAB24Q969Q5 203 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 AAMDCQ9H7C9 122 aa13.08□□□□□ -0.32
GTF3C1-207ENST00000567806 TRAV12-3A0A0B4J271 114 aa13.07□□□□□ -0.32
GTF3C1-207ENST00000567806 H3BQ15 152 aa13.07□□□□□ -0.32
GTF3C1-207ENST00000567806 NBEAP1P0C6P0 100 aa13.07□□□□□ -0.32
GTF3C1-207ENST00000567806 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
GTF3C1-207ENST00000567806 PPT1P50897 306 aa13.07□□□□□ -0.32
GTF3C1-207ENST00000567806 MAPKAPK5-AS1Q8N8E1 139 aa13.07□□□□□ -0.32
GTF3C1-207ENST00000567806 SAT2Q96F10 170 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-207ENST00000567806 SLC25A2Q9BXI2 301 aa13.07□□□□□ -0.32
GTF3C1-207ENST00000567806 PRELID1Q9Y255 219 aa13.07□□□□□ -0.32
GTF3C1-207ENST00000567806 HSPG2P98160 4391 aa13.07□□□□□ -0.32
GTF3C1-207ENST00000567806 H3BNG1 76 aa13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 CT45A10P0DMU9 189 aa13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 HOXA5P20719 270 aa13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 SULT1A2P50226 295 aa13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 NKX2-5P52952 324 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 UBE2L3P68036 154 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 ESRGQ1W209 222 aa13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 SPATA12Q7Z6I5 190 aa13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 FAM167A-AS1Q96KT0 104 aa13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 ODF3Q96PU9 254 aa13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 PYGO2Q9BRQ0 406 aa13.06□□□□□ -0.32
GTF3C1-207ENST00000567806 TRAV5A0A0B4J249 113 aa13.05□□□□□ -0.32
GTF3C1-207ENST00000567806 NKX6-2Q9C056 277 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-207ENST00000567806 TRBV19A0A075B6N1 114 aa13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 NPIPB6E9PJ23 425 aa13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 IFNA7P01567 189 aa13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 H2AFB1P0C5Y9 115 aa13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 BLOC1S1P78537 153 aa13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 DAZ2Q13117 558 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 ARL6IP6Q8N6S5 226 aa13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 FAM213BQ8TBF2 198 aa13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 MRPL53Q96EL3 112 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 UPK3BQ9BT76 320 aa13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 Q9H3A6 140 aa13.04□□□□□ -0.32
GTF3C1-207ENST00000567806 LRP1BQ9NZR2 4599 aa13.03□□□□□ -0.32
GTF3C1-207ENST00000567806 A0A1W2PPQ1 181 aa13.03□□□□□ -0.32
GTF3C1-207ENST00000567806 MAP1LC3B2A6NCE7 125 aa13.03□□□□□ -0.32
GTF3C1-207ENST00000567806 MBD3L1Q8WWY6 194 aa13.03□□□□□ -0.32
GTF3C1-207ENST00000567806 MAP1LC3BQ9GZQ8 125 aa13.03□□□□□ -0.32
GTF3C1-207ENST00000567806 ZNF586Q9NXT0 402 aa13.03□□□□□ -0.32
GTF3C1-207ENST00000567806 MRPS16Q9Y3D3 137 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-207ENST00000567806 ARL2-SNX15V9GYD0 113 aa13.03□□□□□ -0.32
GTF3C1-207ENST00000567806 TRGV2A0A075B6R0 118 aa13.02□□□□□ -0.33
GTF3C1-207ENST00000567806 SLC25A5P05141 298 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-207ENST00000567806 ARL14EPLP0DKL9 152 aa13.02□□□□□ -0.33
GTF3C1-207ENST00000567806 CSN1S1P47710 185 aa13.02□□□□□ -0.33
GTF3C1-207ENST00000567806 Q6ZTI0 123 aa13.02□□□□□ -0.33
GTF3C1-207ENST00000567806 SFT2D1Q8WV19 159 aa13.02□□□□□ -0.33
GTF3C1-207ENST00000567806 FXYD5Q96DB9 178 aa13.02□□□□□ -0.33
GTF3C1-207ENST00000567806 KRTAP1-5Q9BYS1 174 aa13.02□□□□□ -0.33
GTF3C1-207ENST00000567806 TMPRSS5Q9H3S3 457 aa13.02□□□□□ -0.33
GTF3C1-207ENST00000567806 TRAV1-1A0A0B4J248 108 aa13.01□□□□□ -0.33
GTF3C1-207ENST00000567806 PYYP10082 97 aa13.01□□□□□ -0.33
GTF3C1-207ENST00000567806 BTF3P20290 206 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-207ENST00000567806 GCHFRP30047 84 aa13.01□□□□□ -0.33
GTF3C1-207ENST00000567806 TAGLN2P37802 199 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-207ENST00000567806 ZNF680Q8NEM1 530 aa13.01□□□□□ -0.33
GTF3C1-207ENST00000567806 SUN5Q8TC36 379 aa13.01□□□□□ -0.33
GTF3C1-207ENST00000567806 LINC00477Q96M19 166 aa13.01□□□□□ -0.33
GTF3C1-207ENST00000567806 C7orf71A4D174 169 aa13□□□□□ -0.33
GTF3C1-207ENST00000567806 OR10J4P0C629 311 aa13□□□□□ -0.33
GTF3C1-207ENST00000567806 ERCC8Q13216 396 aa13□□□□□ -0.33
GTF3C1-207ENST00000567806 IQCF2Q8IXL9 164 aa13□□□□□ -0.33
GTF3C1-207ENST00000567806 BLNKQ8WV28 456 aa13□□□□□ -0.33
GTF3C1-207ENST00000567806 TCEAL7Q9BRU2 100 aa13□□□□□ -0.33
GTF3C1-207ENST00000567806 GSN-AS1Q9NRJ2 163 aa13□□□□□ -0.33
GTF3C1-207ENST00000567806 A0A1W2PRE2 83 aa12.99□□□□□ -0.33
GTF3C1-207ENST00000567806 Q8N1X5 172 aa12.99□□□□□ -0.33
GTF3C1-207ENST00000567806 CMTM2Q8TAZ6 248 aa12.99□□□□□ -0.33
GTF3C1-207ENST00000567806 TXNDC17Q9BRA2 123 aa12.99□□□□□ -0.33
GTF3C1-207ENST00000567806 OTORQ9NRC9 128 aa12.99□□□□□ -0.33
GTF3C1-207ENST00000567806 TRGV1A0A0A0MS02 117 aa12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 SERTM2A0A1B0GWG4 89 aa12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 M0R3E3 92 aa12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 IFNA1P01562 189 aa12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 RNASE4P34096 147 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 ZNF726P1Q15940 193 aa12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 TEX261Q6UWH6 196 aa12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 ALKAL2Q6UX46 152 aa12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 EIF4E3Q8N5X7 224 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 VSIG2Q96IQ7 327 aa12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 SCRT2Q9NQ03 307 aa12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
GTF3C1-207ENST00000567806 A0A096LPF7 62 aa12.97□□□□□ -0.33
GTF3C1-207ENST00000567806 K7EQM0 130 aa12.97□□□□□ -0.33
GTF3C1-207ENST00000567806 HMGB3O15347 200 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms