RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ZNF80P51504 273 aaPredicted RBP12.72□□□□□ -0.37
LINC00554-201ENST00000564841 CYSLTR1Q9Y271 337 aa12.72□□□□□ -0.37
LINC00554-201ENST00000564841 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.71□□□□□ -0.37
LINC00554-201ENST00000564841 C17orf100A8MU93 164 aa12.71□□□□□ -0.37
LINC00554-201ENST00000564841 LY6HO94772 140 aa12.71□□□□□ -0.37
LINC00554-201ENST00000564841 FLNCQ14315 2725 aa12.71□□□□□ -0.37
LINC00554-201ENST00000564841 ZFP2Q6ZN57 461 aa12.71□□□□□ -0.38
LINC00554-201ENST00000564841 NGBQ9NPG2 151 aa12.71□□□□□ -0.38
LINC00554-201ENST00000564841 MORN3Q6PF18 240 aaPredicted RBP12.7□□□□□ -0.38
LINC00554-201ENST00000564841 Q6ZUT4 128 aa12.7□□□□□ -0.38
LINC00554-201ENST00000564841 ZNF502Q8TBZ5 544 aa12.7□□□□□ -0.38
LINC00554-201ENST00000564841 E7EQL1 145 aa12.7□□□□□ -0.38
LINC00554-201ENST00000564841 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
LINC00554-201ENST00000564841 A0A1B0GW15 77 aa12.7□□□□□ -0.38
LINC00554-201ENST00000564841 DPM2O94777 84 aa12.7□□□□□ -0.38
LINC00554-201ENST00000564841 PGPEP1Q9NXJ5 209 aa12.7□□□□□ -0.38
LINC00554-201ENST00000564841 INS-IGF2F8WCM5 200 aa12.69□□□□□ -0.38
LINC00554-201ENST00000564841 TTC9CQ8N5M4 171 aa12.69□□□□□ -0.38
LINC00554-201ENST00000564841 PRSS29PA6NIE9 313 aa12.69□□□□□ -0.38
LINC00554-201ENST00000564841 EFNA4P52798 201 aa12.69□□□□□ -0.38
LINC00554-201ENST00000564841 KIR2DL4Q99706 377 aa12.69□□□□□ -0.38
LINC00554-201ENST00000564841 CELSR1Q9NYQ6 3014 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 LOC107984156A0A0G2JMH3 177 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 B5MCH6 92 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 TNFRSF6BO95407 300 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 TSPAN13O95857 204 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 IGKV1-17P01599 117 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 PSMB2P49721 201 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 FAM208BQ5VWN6 2430 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 ZNF575Q86XF7 245 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 ARL17AQ8IVW1 177 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 VKORC1Q9BQB6 163 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 MAP1LC3AQ9H492 121 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 TRAV26-2A0A0B4J265 109 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 RAB9BQ9NP90 201 aa12.68□□□□□ -0.38
LINC00554-201ENST00000564841 RPL27AP46776 148 aaKnown RBP12.67□□□□□ -0.38
LINC00554-201ENST00000564841 CARD19Q96LW7 228 aa12.67□□□□□ -0.38
LINC00554-201ENST00000564841 RASL11BQ9BPW5 248 aa12.67□□□□□ -0.38
LINC00554-201ENST00000564841 C1QTNF4Q9BXJ3 329 aa12.67□□□□□ -0.38
LINC00554-201ENST00000564841 HLA-DMBP28068 263 aa12.67□□□□□ -0.38
LINC00554-201ENST00000564841 RNASE6Q93091 150 aaKnown RBP12.67□□□□□ -0.38
LINC00554-201ENST00000564841 ZFHX3Q15911 3703 aa12.67□□□□□ -0.38
LINC00554-201ENST00000564841 UTP20O75691 2785 aaKnown RBP12.67□□□□□ -0.38
LINC00554-201ENST00000564841 CRYBG3Q68DQ2 2970 aa12.67□□□□□ -0.38
LINC00554-201ENST00000564841 KLRB1Q12918 225 aa12.67□□□□□ -0.38
LINC00554-201ENST00000564841 Q6AWC8 147 aa12.67□□□□□ -0.38
LINC00554-201ENST00000564841 KLK15Q9H2R5 256 aa12.67□□□□□ -0.38
LINC00554-201ENST00000564841 IGHV3OR16-8A0A075B7F1 116 aa12.66□□□□□ -0.38
LINC00554-201ENST00000564841 CD3EP07766 207 aa12.66□□□□□ -0.38
LINC00554-201ENST00000564841 COX7A1P24310 79 aa12.66□□□□□ -0.38
LINC00554-201ENST00000564841 VMA21Q3ZAQ7 101 aa12.66□□□□□ -0.38
LINC00554-201ENST00000564841 CFAP126Q5VTH2 177 aa12.66□□□□□ -0.38
LINC00554-201ENST00000564841 NUP37Q8NFH4 326 aa12.66□□□□□ -0.38
LINC00554-201ENST00000564841 SHISA9B4DS77 424 aa12.66□□□□□ -0.38
LINC00554-201ENST00000564841 ORM1P02763 201 aa12.66□□□□□ -0.38
LINC00554-201ENST00000564841 PIFOQ8TCI5 191 aa12.66□□□□□ -0.38
LINC00554-201ENST00000564841 UFC1Q9Y3C8 167 aa12.66□□□□□ -0.38
LINC00554-201ENST00000564841 TRBV7-3A0A075B6L6 115 aa12.65□□□□□ -0.38
LINC00554-201ENST00000564841 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
LINC00554-201ENST00000564841 VSTM5A8MXK1 200 aa12.65□□□□□ -0.38
LINC00554-201ENST00000564841 IL4P05112 153 aa12.65□□□□□ -0.38
LINC00554-201ENST00000564841 SHISA2Q6UWI4 295 aa12.65□□□□□ -0.38
LINC00554-201ENST00000564841 EPG5Q9HCE0 2579 aa12.65□□□□□ -0.38
LINC00554-201ENST00000564841 HLA-DRB4P13762 266 aa12.65□□□□□ -0.38
LINC00554-201ENST00000564841 TMEM14CQ9P0S9 112 aa12.65□□□□□ -0.38
LINC00554-201ENST00000564841 HLA-DRB4X5D2U9 266 aa12.65□□□□□ -0.38
LINC00554-201ENST00000564841 IGSF10Q6WRI0 2623 aa12.65□□□□□ -0.39
LINC00554-201ENST00000564841 GATA4P43694 442 aa12.64□□□□□ -0.39
LINC00554-201ENST00000564841 UCNP55089 124 aa12.64□□□□□ -0.39
LINC00554-201ENST00000564841 ANAPC13Q9BS18 74 aa12.64□□□□□ -0.39
LINC00554-201ENST00000564841 ERG28Q9UKR5 140 aa12.64□□□□□ -0.39
LINC00554-201ENST00000564841 KLRD1Q13241 179 aa12.64□□□□□ -0.39
LINC00554-201ENST00000564841 LINC00574Q9H8X3 128 aa12.64□□□□□ -0.39
LINC00554-201ENST00000564841 HOXA3O43365 443 aaPredicted RBP12.64□□□□□ -0.39
LINC00554-201ENST00000564841 SHANK2-AS3Q9BTD1 123 aa12.64□□□□□ -0.39
LINC00554-201ENST00000564841 FBXL15Q9H469 300 aa12.64□□□□□ -0.39
LINC00554-201ENST00000564841 C5orf64Q2M2E5 130 aa12.63□□□□□ -0.39
LINC00554-201ENST00000564841 TRGV3P03979 118 aa12.63□□□□□ -0.39
LINC00554-201ENST00000564841 C3orf36Q3SXR2 165 aa12.63□□□□□ -0.39
LINC00554-201ENST00000564841 RPEQ96AT9 228 aa12.63□□□□□ -0.39
LINC00554-201ENST00000564841 H3BVH4 76 aa12.62□□□□□ -0.39
LINC00554-201ENST00000564841 TMEM178BH3BS89 294 aa12.62□□□□□ -0.39
LINC00554-201ENST00000564841 NDUFB3O43676 98 aa12.62□□□□□ -0.39
LINC00554-201ENST00000564841 DEFB104AQ8WTQ1 72 aa12.62□□□□□ -0.39
LINC00554-201ENST00000564841 ADORA2A-AS1P86434 159 aa12.62□□□□□ -0.39
LINC00554-201ENST00000564841 SRSF1Q07955 248 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00554-201ENST00000564841 ZNF491Q8N8L2 437 aa12.62□□□□□ -0.39
LINC00554-201ENST00000564841 TRBV6-1A0A0K0K1D8 114 aa12.61□□□□□ -0.39
LINC00554-201ENST00000564841 TEX22C9J3V5 150 aa12.61□□□□□ -0.39
LINC00554-201ENST00000564841 I3L2K1 104 aa12.61□□□□□ -0.39
LINC00554-201ENST00000564841 SPRY2O43597 315 aa12.61□□□□□ -0.39
LINC00554-201ENST00000564841 DTX2Q86UW9 622 aa12.61□□□□□ -0.39
LINC00554-201ENST00000564841 PRR25Q96S07 402 aa12.61□□□□□ -0.39
LINC00554-201ENST00000564841 TRBV20-1A0A075B6N2 111 aa12.61□□□□□ -0.39
LINC00554-201ENST00000564841 H3BRN7 92 aa12.61□□□□□ -0.39
LINC00554-201ENST00000564841 MRPS12O15235 138 aaKnown RBP12.61□□□□□ -0.39
LINC00554-201ENST00000564841 IGHV3-35A0A0C4DH35 117 aa12.6□□□□□ -0.39
LINC00554-201ENST00000564841 USP9XQ93008 2570 aaPredicted RBP12.6□□□□□ -0.39
LINC00554-201ENST00000564841 IGHV3-23P01764 117 aa12.6□□□□□ -0.39
LINC00554-201ENST00000564841 IGLC6P0CF74 106 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms