RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 TWIST1Q15672 202 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 ATP1A1-AS1Q5TC04 95 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 HES3Q5TGS1 186 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 PRSS57Q6UWY2 283 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 FOXI2Q6ZQN5 318 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 Q71RC1 249 aaPredicted RBP3.67□□□□□ -1.82
CAPN3-212ENST00000564503 PHLDA1Q8WV24 401 aaPredicted RBP3.67□□□□□ -1.82
CAPN3-212ENST00000564503 RNF5Q99942 180 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 TM2D2Q9BX73 214 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 RAB1BQ9H0U4 201 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 TMEM133Q9H2Q1 129 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 NXT2Q9NPJ8 142 aaKnown RBP3.67□□□□□ -1.82
CAPN3-212ENST00000564503 SIGLEC9Q9Y336 463 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 TSSC4Q9Y5U2 329 aaPredicted RBP3.67□□□□□ -1.82
CAPN3-212ENST00000564503 CDH23Q9H251 3354 aa3.67□□□□□ -1.82
CAPN3-212ENST00000564503 TRBV25-1A0A075B6N4 114 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 TMSB15BA0A087X1C1 80 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 WI2-2373I1.2A0A1W2PRP0 233 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 C17orf100A8MU93 164 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 IGLL5B9A064 214 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 TMEM178BH3BS89 294 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 TNFRSF13BO14836 293 aaPredicted RBP3.66□□□□□ -1.82
CAPN3-212ENST00000564503 IGLC6P0CF74 106 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 IGHV1-8P0DP01 117 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 LOXP28300 417 aaPredicted RBP3.66□□□□□ -1.82
CAPN3-212ENST00000564503 LEPP41159 167 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 SRSF6Q13247 344 aaKnown RBP3.66□□□□□ -1.82
CAPN3-212ENST00000564503 TMEM155Q4W5P6 130 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 TCTEX1D4Q5JR98 221 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 KLF17Q5JT82 389 aaPredicted RBP3.66□□□□□ -1.82
CAPN3-212ENST00000564503 ZNF474Q6S9Z5 364 aaPredicted RBP3.66□□□□□ -1.82
CAPN3-212ENST00000564503 ZNF562Q6V9R5 426 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 PPP1R27Q86WC6 154 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 C17orf77Q96MU5 243 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 ARRDC1-AS1Q9H2J1 176 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 SPANXB1Q9NS25 103 aaPredicted RBP3.66□□□□□ -1.82
CAPN3-212ENST00000564503 NHP2Q9NX24 153 aaKnown RBP3.66□□□□□ -1.82
CAPN3-212ENST00000564503 LAMA1P25391 3075 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 GPR179Q6PRD1 2367 aa3.66□□□□□ -1.82
CAPN3-212ENST00000564503 IGKV2D-26A0A0A0MRZ7 120 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 IGHV1-3A0A0C4DH29 117 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 SMKR1H3BMG3 65 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 FCN3O75636 299 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 IGKV1-17P01599 117 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 IL4P05112 153 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 PRSS1P07477 247 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 CD59P13987 128 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 CNTFRP26992 372 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 TCTAP57738 103 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 FXYD7P58549 80 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 SMAGPQ0VAQ4 97 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 C12orf74Q32Q52 190 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 Q6ZS92 163 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 MTURNQ8N3F0 131 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 TTC9CQ8N5M4 171 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 ZNF491Q8N8L2 437 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 Q8N8P6 123 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 FDCSPQ8NFU4 85 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 ATP6V0E2Q8NHE4 81 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 MYOZ3Q8TDC0 251 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 ARPC1AQ92747 370 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 RNF185Q96GF1 192 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 C18orf15Q96N68 181 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 PRR25Q96S07 402 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 FOXC2Q99958 501 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 FAM110AQ9BQ89 295 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 SIRPDQ9H106 197 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 GTSF1LQ9H1H1 148 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 GEMIN7Q9H840 131 aaKnown RBP3.65□□□□□ -1.83
CAPN3-212ENST00000564503 YAE1D1Q9NRH1 226 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 KAAG1Q9UBP8 84 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 HHLA3Q9XRX5 114 aa3.65□□□□□ -1.83
CAPN3-212ENST00000564503 FLNBO75369 2602 aaKnown RBP3.64□□□□□ -1.83
CAPN3-212ENST00000564503 WDFY4Q6ZS81 3184 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 A0A087WX48 190 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 IGHV3-72A0A0B4J1Y9 119 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.64□□□□□ -1.83
CAPN3-212ENST00000564503 A0A1B0GWB2 263 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 FABP5P3A8MUU1 101 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 K7EIM0 57 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 K7ERJ3 54 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 M0R3E3 92 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 IGLV1-47P01700 117 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 APELAP0DMC3 54 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 RPL7P18124 248 aaKnown RBP3.64□□□□□ -1.83
CAPN3-212ENST00000564503 CKS1BP61024 79 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 CCL8P80075 99 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 ADORA2A-AS1P86434 159 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 WFDC2Q14508 124 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 LPAL2Q16609 132 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 RRN3P1Q2M238 152 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 ZC2HC1BQ5TFG8 222 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 FAM159AQ6UWV7 190 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 LYPD2Q6UXB3 125 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 GTSCR1Q86UQ5 136 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 IGFBPL1Q8WX77 278 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 TMEM158Q8WZ71 300 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 MRAP2Q96G30 205 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 CNFNQ9BYD5 112 aa3.64□□□□□ -1.83
CAPN3-212ENST00000564503 FBXL15Q9H469 300 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms