RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ERVFC1-1P60608 527 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 UBE2G1P62253 170 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 LCN12Q6JVE5 192 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 ZNF575Q86XF7 245 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 CMTM2Q8TAZ6 248 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 MRPL53Q96EL3 112 aaKnown RBP4.94□□□□□ -1.62
CAPN3-210ENST00000561817 ZC2HC1AQ96GY0 325 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 OR5B12Q96R08 314 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 SLC50A1Q9BRV3 221 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 C16orf95Q9H693 158 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 SMPXQ9UHP9 88 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 RPH3ALQ9UNE2 315 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 ZFP30Q9Y2G7 519 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 IGKV2-40A0A087WW87 121 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-210ENST00000561817 RBAKDNA6NC62 111 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 C1orf196B1AJZ1 125 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 LGALS9O00182 355 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 IGKV2D-40P01614 121 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-210ENST00000561817 TRGC2P03986 189 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 FRMD6-AS1P0C7T7 363 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 MGST1P10620 155 aaKnown RBP4.93□□□□□ -1.62
CAPN3-210ENST00000561817 S100PP25815 95 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 CDX1P47902 265 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-210ENST00000561817 HILS1P60008 231 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 S100A12P80511 92 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 KLF5Q13887 457 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-210ENST00000561817 IBA57Q5T440 356 aaKnown RBP4.93□□□□□ -1.62
CAPN3-210ENST00000561817 RNASEKQ6P5S7 137 aaKnown RBP4.93□□□□□ -1.62
CAPN3-210ENST00000561817 ADAMTSL5Q6ZMM2 481 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 PRNTQ86SH4 94 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 PRIMA1Q86XR5 153 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 ZFP82Q8N141 532 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 RNF182Q8N6D2 247 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 KLHDC1Q8N7A1 406 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 GRAMD2BQ96HH9 432 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 VGLL1Q99990 258 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 RHPN1-AS1Q9BWJ2 59 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 SAV1Q9H4B6 383 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-210ENST00000561817 AAMDCQ9H7C9 122 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 DAZ1Q9NQZ3 744 aaKnown RBP4.93□□□□□ -1.62
CAPN3-210ENST00000561817 NAGKQ9UJ70 344 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 C2CD3Q4AC94 2353 aa4.93□□□□□ -1.62
CAPN3-210ENST00000561817 A0A1W2PS18 150 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 FBLL1A6NHQ2 334 aaKnown RBP4.92□□□□□ -1.62
CAPN3-210ENST00000561817 GATCO43716 136 aaKnown RBP4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST1H2BKO60814 126 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 CA1P00915 261 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST1H2BJP06899 126 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST1H2BOP23527 126 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST1H2BBP33778 126 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 CSN1S1P47710 185 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST1H2BDP58876 126 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 RAB5BP61020 215 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST1H2BCP62807 126 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST2H2BEQ16778 126 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 RPEL1Q2QD12 228 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 FAM106AQ4KMX7 169 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 ACTL10Q5JWF8 245 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.92□□□□□ -1.62
CAPN3-210ENST00000561817 PRR27Q6MZM9 219 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 KCNIP4Q6PIL6 250 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 C9orf47Q6ZRZ4 202 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 C4orf3Q8WVX3 66 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 GTSF1Q8WW33 167 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 FRZBQ92765 325 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST1H2BHQ93079 126 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 C8orf49Q96NF6 230 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 PRR25Q96S07 402 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST1H2BNQ99877 126 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 HIST1H2BMQ99879 126 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 UFC1Q9Y3C8 167 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 TNFRSF18Q9Y5U5 241 aa4.92□□□□□ -1.62
CAPN3-210ENST00000561817 A0A1B0GXF2 115 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 IZUMO1RA6ND01 250 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 ZNF705GA8MUZ8 300 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-210ENST00000561817 NDUFA7O95182 113 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 CSN3P07498 182 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 TRGC1P0CF51 173 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 HOXD3P31249 432 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-210ENST00000561817 ZNF80P51504 273 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-210ENST00000561817 FOXA3P55318 350 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-210ENST00000561817 ERCC8Q13216 396 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 GDF5OSQ5U4N7 250 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 HIST2H2BDQ6DRA6 164 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 CD164L2Q6UWJ8 174 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-210ENST00000561817 NUP35Q8NFH5 326 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 OR4B1Q8NGF8 309 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 LINC01006Q8NI28 216 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 DCANP1Q8TF63 244 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 TSKUQ8WUA8 353 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 BTF3L4Q96K17 158 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 FAM19A4Q96LR4 140 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 AGPAT4-IT1Q9H0P7 198 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 RPP21Q9H633 154 aaKnown RBP4.91□□□□□ -1.62
CAPN3-210ENST00000561817 NRN1Q9NPD7 142 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 BIN3Q9NQY0 253 aa4.91□□□□□ -1.62
CAPN3-210ENST00000561817 FAM231BA6NCW3 169 aa4.9□□□□□ -1.63
CAPN3-210ENST00000561817 C2orf70A6NJV1 201 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms