RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PTPRGP23470 1445 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 DISP1Q96F81 1524 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 ARHGEF12Q9NZN5 1544 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 MGAMO43451 1857 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 SHROOM2Q13796 1616 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 PREX2Q70Z35 1606 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 CDC42EP2O14613 210 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 IFNGP01579 166 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 AZU1P20160 251 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 KRTAP10-5P60370 271 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 PLGLB1Q02325 96 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 PDE6HQ13956 83 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 CLLU1Q5K131 121 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 OR5AS1Q8N127 324 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 SPACA4Q8TDM5 124 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 Q96M85 177 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 GGACTQ9BVM4 153 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 CCDC167Q9P0B6 97 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 MDC1Q14676 2089 aaKnown RBP1.93□□□□□ -2.1
TDP1-217ENST00000557782 SPHKAPQ2M3C7 1700 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 PXDNLA1KZ92 1463 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 ADGRL2O95490 1459 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 RALGAPBQ86X10 1494 aa1.93□□□□□ -2.1
TDP1-217ENST00000557782 ZC3H13Q5T200 1668 aaKnown RBP1.93□□□□□ -2.1
TDP1-217ENST00000557782 DAPK1P53355 1430 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 IFT172Q9UG01 1749 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 HELZP42694 1942 aaKnown RBP1.92□□□□□ -2.1
TDP1-217ENST00000557782 CD3DP04234 171 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 CD14P08571 375 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 CXCL8P10145 99 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 KRTAP10-6P60371 365 aaPredicted RBP1.92□□□□□ -2.1
TDP1-217ENST00000557782 OTOSQ8NHW6 89 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 PSMF1Q92530 271 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 GNG8Q9UK08 70 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 MPC1Q9Y5U8 109 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 SOX21Q9Y651 276 aaPredicted RBP1.92□□□□□ -2.1
TDP1-217ENST00000557782 RTTNQ86VV8 2226 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 TMEM2Q9UHN6 1383 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 GAPVD1Q14C86 1478 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 ABCA8O94911 1581 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 ARHGEF5Q12774 1597 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 PLXNA4Q9HCM2 1894 aa1.92□□□□□ -2.1
TDP1-217ENST00000557782 PRDM15P57071 1507 aaPredicted RBP1.91□□□□□ -2.1
TDP1-217ENST00000557782 CLASP1Q7Z460 1538 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 KIAA0586Q9BVV6 1533 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 IQGAP3Q86VI3 1631 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 EIF2AK4Q9P2K8 1649 aaKnown RBP1.91□□□□□ -2.1
TDP1-217ENST00000557782 PHLPP1O60346 1717 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 CEP192Q8TEP8 1941 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 LAMB2P55268 1798 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 SHPRHQ149N8 1683 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 PLXNC1O60486 1568 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 SAMD9LQ8IVG5 1584 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 MAST1Q9Y2H9 1570 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 GRIN2AQ12879 1464 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 SHANK2Q9UPX8 1470 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 TRBV20-1A0A075B6N2 111 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 IGHV1-24A0A0C4DH33 117 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 LOC107984156A0A0G2JMH3 177 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 C3orf85A0A1B0GTC6 90 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 C5orf67F2Z3F1 127 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 IGF2P01344 180 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 CD2P06729 351 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 PYYP10082 97 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 MRPS10P82664 201 aaKnown RBP1.91□□□□□ -2.1
TDP1-217ENST00000557782 C1orf137Q5JT78 98 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 ARL17AQ8IVW1 177 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 SMIM7Q9BQ49 75 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 KRTAP17-1Q9BYP8 105 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 CHCHD2Q9Y6H1 151 aaPredicted RBP1.91□□□□□ -2.1
TDP1-217ENST00000557782 HEATR1Q9H583 2144 aaKnown RBP1.91□□□□□ -2.1
TDP1-217ENST00000557782 MADDQ8WXG6 1647 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 ZMYM4Q5VZL5 1548 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 ABCC5O15440 1437 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 ARHGAP31Q2M1Z3 1444 aa1.91□□□□□ -2.1
TDP1-217ENST00000557782 NINQ8N4C6 2090 aa1.9□□□□□ -2.1
TDP1-217ENST00000557782 INO80Q9ULG1 1556 aaPredicted RBP1.9□□□□□ -2.1
TDP1-217ENST00000557782 FREM3P0C091 2139 aa1.9□□□□□ -2.1
TDP1-217ENST00000557782 ABCC10Q5T3U5 1492 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 KIF13AQ9H1H9 1805 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 A0A0G2JMM0 328 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 A0A1W2PPB8 328 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 IFITM5A6NNB3 132 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 BBIP1A8MTZ0 92 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 KIR3DP1A8MWS1 328 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 ZNF736B4DX44 427 aaPredicted RBP1.9□□□□□ -2.11
TDP1-217ENST00000557782 APODP05090 189 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 IGKV4-1P06312 121 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 ZNF25P17030 456 aaPredicted RBP1.9□□□□□ -2.11
TDP1-217ENST00000557782 SCIMPQ6UWF3 145 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 CASC2Q6XLA1 102 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 FP248Q71RG6 208 aaPredicted RBP1.9□□□□□ -2.11
TDP1-217ENST00000557782 GKN2Q86XP6 184 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 LINC00269Q8N2A0 174 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 CIB3Q96Q77 187 aaPredicted RBP1.9□□□□□ -2.11
TDP1-217ENST00000557782 CHD1O14646 1710 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 DEPDC5O75140 1603 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 MYO3AQ8NEV4 1616 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 FAM135AQ9P2D6 1515 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms