RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 CD3DP04234 171 aa0.59□□□□□ -2.31
SCFD1-217ENST00000555953 SCGB1A1P11684 91 aa0.59□□□□□ -2.31
SCFD1-217ENST00000555953 MRPS36P82909 103 aaKnown RBP0.59□□□□□ -2.31
SCFD1-217ENST00000555953 NEDD8Q15843 81 aa0.59□□□□□ -2.31
SCFD1-217ENST00000555953 GLIPR1L1Q6UWM5 242 aa0.59□□□□□ -2.31
SCFD1-217ENST00000555953 OR8I2Q8N0Y5 310 aa0.59□□□□□ -2.31
SCFD1-217ENST00000555953 OR4B1Q8NGF8 309 aa0.59□□□□□ -2.31
SCFD1-217ENST00000555953 MAFIPQ8WZ33 124 aa0.59□□□□□ -2.31
SCFD1-217ENST00000555953 BANF2Q9H503 90 aa0.59□□□□□ -2.31
SCFD1-217ENST00000555953 DNAJC15Q9Y5T4 150 aa0.59□□□□□ -2.31
SCFD1-217ENST00000555953 CITO14578 2027 aa0.59□□□□□ -2.32
SCFD1-217ENST00000555953 MED23Q9ULK4 1368 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 TMEM189A5PLL7 270 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 ARL5CA6NH57 179 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 C5orf58C9J3I9 102 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 DPM2O94777 84 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 OR2H2O95918 312 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 IGKCP01834 107 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 PAEPP09466 180 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 CCL4P13236 92 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 TPT1P13693 172 aaKnown RBP0.58□□□□□ -2.32
SCFD1-217ENST00000555953 NDUFA6P56556 154 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 SPATA45Q537H7 98 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 LINC00299Q6ZSB3 139 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 C5orf17Q8NAS9 161 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 OR5A2Q8NGI9 324 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 OTOSQ8NHW6 89 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 LPAR5Q9H1C0 372 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 COMMD3Q9UBI1 195 aa0.58□□□□□ -2.32
SCFD1-217ENST00000555953 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
SCFD1-217ENST00000555953 KDM5CP41229 1560 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 MED12Q93074 2177 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 ARHGAP31Q2M1Z3 1444 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 TRAV23DV6A0A075B6W5 121 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 A0A096LPI6 279 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 IGHV3-33P01772 117 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 TRACP01848 142 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 SCTP09683 121 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 LINC00694P0DN24 101 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 HSD17B12Q53GQ0 312 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 GLYATL3Q5SZD4 288 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 TMEM91Q6ZNR0 172 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 SBSPONQ8IVN8 264 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 TCTE3Q8IZS6 198 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 SMIM3Q9BZL3 60 aa0.57□□□□□ -2.32
SCFD1-217ENST00000555953 LSM2Q9Y333 95 aaKnown RBP0.57□□□□□ -2.32
SCFD1-217ENST00000555953 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.57□□□□□ -2.32
SCFD1-217ENST00000555953 XIRP1Q702N8 1843 aaKnown RBP0.57□□□□□ -2.32
SCFD1-217ENST00000555953 FER1L6Q2WGJ9 1857 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 MUC4Q99102 2169 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 ZNF469Q96JG9 3925 aaPredicted RBP0.56□□□□□ -2.32
SCFD1-217ENST00000555953 ZFC3H1O60293 1989 aaKnown RBP0.56□□□□□ -2.32
SCFD1-217ENST00000555953 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.56□□□□□ -2.32
SCFD1-217ENST00000555953 UQCRQO14949 82 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 EDF1O60869 148 aaKnown RBP0.56□□□□□ -2.32
SCFD1-217ENST00000555953 IGLC6P0CF74 106 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 IL7P13232 177 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 AKR1D1P51857 326 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 QRFPP83859 136 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 SMIM21Q3B7S5 101 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 CCDC153Q494R4 210 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 CASC2Q6XLA1 102 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 OR8J3Q8NGG0 315 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 OR5AK2Q8NH90 309 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 AP1S3Q96PC3 154 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 ANK1P16157 1881 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 CTTNBP2Q8WZ74 1663 aa0.56□□□□□ -2.32
SCFD1-217ENST00000555953 FHAD1B1AJZ9 1412 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 BICRAQ9NZM4 1560 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 LOC107986453A0A1B0GWG9 222 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 A0A1W2PRS3 328 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 PITX3O75364 302 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 SAA1P0DJI8 122 aaPredicted RBP0.55□□□□□ -2.32
SCFD1-217ENST00000555953 KDELR1P24390 212 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 FXYD4P59646 89 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 PCBD1P61457 104 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 IQCJQ1A5X6 159 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 MORN2Q502X0 79 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 OCIAD2Q56VL3 154 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 CLLU1Q5K131 121 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 TSTD1Q8NFU3 115 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 FAM107BQ9H098 131 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 CALML5Q9NZT1 146 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 WDR97A6NE52 1622 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 ZDBF2Q9HCK1 2354 aa0.55□□□□□ -2.32
SCFD1-217ENST00000555953 IGHV1-24A0A0C4DH33 117 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 A0A0J9YY99 117 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 NDUFA2O43678 99 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 HLA-DRB4P13762 266 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 CKS2P33552 79 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 GTF2A1P52655 376 aaPredicted RBP0.54□□□□□ -2.32
SCFD1-217ENST00000555953 ARPC4P59998 168 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 CIB3Q96Q77 187 aaPredicted RBP0.54□□□□□ -2.32
SCFD1-217ENST00000555953 MPC1Q9Y5U8 109 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 HLA-DRB4X5D2U9 266 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 CEP152O94986 1710 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 CPDO75976 1380 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 ERCC6Q03468 1493 aa0.54□□□□□ -2.32
SCFD1-217ENST00000555953 LRP5O75197 1615 aa0.53□□□□□ -2.32
SCFD1-217ENST00000555953 ZNF462Q96JM2 2506 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms