RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 C8orf59Q8N0T1 100 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-223ENST00000553686 RNF182Q8N6D2 247 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 NHLRC2Q8NBF2 726 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 TYMSOSQ8TAI1 123 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 RNF185Q96GF1 192 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 SLC25A22Q9H936 323 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 PAIP2BQ9ULR5 123 aaKnown RBP3.63□□□□□ -1.83
ATXN3-223ENST00000553686 TPRKBQ9Y3C4 175 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 TRAV18A0A075B6X5 111 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 TRAV8-2A0A0B4J237 113 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 A0A1B0GVG6 124 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 CRYM-AS1A6NIL9 109 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 H3BMQ9 156 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 GABARAPH6UMI1 98 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 PDCD5O14737 125 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 WBP4O75554 376 aaKnown RBP3.62□□□□□ -1.83
ATXN3-223ENST00000553686 GABARAPO95166 117 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 HSMCR30P0CW71 290 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 HRH1P35367 487 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 TCL1AP56279 114 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 TAS2R20P59543 309 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 RGS21Q2M5E4 152 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 LPCAT3Q6P1A2 487 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 DPPA3Q6W0C5 159 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 PRSS48Q7RTY5 328 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 APH1BQ8WW43 257 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 IL22RA2Q969J5 263 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 MRGPRFQ96AM1 343 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 RPUSD4Q96CM3 377 aaKnown RBP3.62□□□□□ -1.83
ATXN3-223ENST00000553686 C2orf50Q96LR7 162 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 SCN3BQ9NY72 215 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 KLF12Q9Y4X4 402 aa3.62□□□□□ -1.83
ATXN3-223ENST00000553686 IGKV2D-24A0A075B6R9 120 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 TRAV12-3A0A0B4J271 114 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 FABP12A6NFH5 140 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 H7C1H1 209 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 CCSO14618 274 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 SSX5O60225 188 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 GNAO1P09471 354 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 PTHLHP12272 177 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 CXCL3P19876 107 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 LEPP41159 167 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 SPCS3P61009 180 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 SRPXP78539 464 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 IBA57Q5T440 356 aaKnown RBP3.61□□□□□ -1.83
ATXN3-223ENST00000553686 GPR107Q5VW38 600 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 SDIM1Q6ZPB5 146 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 EIF4E3Q8N5X7 224 aaKnown RBP3.61□□□□□ -1.83
ATXN3-223ENST00000553686 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 C11orf72Q8NBR9 251 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 BPIFCQ8NFQ6 507 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 ALKBH7Q9BT30 221 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-223ENST00000553686 DUSP21Q9H596 190 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 PSORS1C2Q9UIG4 136 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 KIF25-AS1Q9Y6Z4 181 aa3.61□□□□□ -1.83
ATXN3-223ENST00000553686 IGKV1OR2-108A0A075B7D4 117 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 IFITM5A6NNB3 132 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 KLLNB2CW77 178 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 IGKV1-39P01597 117 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 IGKV1D-39P04432 117 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 RPL7P18124 248 aaKnown RBP3.6□□□□□ -1.83
ATXN3-223ENST00000553686 PSMA1P25786 263 aaKnown RBP3.6□□□□□ -1.83
ATXN3-223ENST00000553686 BCAP31P51572 246 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 AKR1C2P52895 323 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 RPL19P84098 196 aaKnown RBP3.6□□□□□ -1.83
ATXN3-223ENST00000553686 ZNF90Q03938 601 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 CIRBPQ14011 172 aaKnown RBP3.6□□□□□ -1.83
ATXN3-223ENST00000553686 TRAM1Q15629 374 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 NDUFA5Q16718 116 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 TRIM16LQ309B1 348 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 COX8CQ7Z4L0 72 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 ZNF664Q8N3J9 261 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 ZNF431Q8TF32 576 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-223ENST00000553686 ZNF2Q9BSG1 426 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-223ENST00000553686 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 OCR1Q9BZK8 76 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 MRPL16Q9NX20 251 aaKnown RBP3.6□□□□□ -1.83
ATXN3-223ENST00000553686 CACFD1Q9UGQ2 172 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 SSR3Q9UNL2 185 aa3.6□□□□□ -1.83
ATXN3-223ENST00000553686 RPL37AP8A6NKH3 93 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 PRSS46E5RG02 174 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 SLC25A5P05141 298 aaKnown RBP3.59□□□□□ -1.83
ATXN3-223ENST00000553686 SFTA3P0C7M3 94 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.83
ATXN3-223ENST00000553686 NEDD8Q15843 81 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 DAZ4Q86SG3 579 aaKnown RBP3.59□□□□□ -1.83
ATXN3-223ENST00000553686 S100A7AQ86SG5 101 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 OR10G4Q8NGN3 311 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 GTSF1Q8WW33 167 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 UFD1Q92890 307 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 C11orf52Q96A22 123 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 YIPF6Q96EC8 236 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 SLC35E1Q96K37 410 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 TMEM147Q9BVK8 224 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 FUNDC2Q9BWH2 189 aa3.59□□□□□ -1.83
ATXN3-223ENST00000553686 DAZ3Q9NR90 486 aaKnown RBP3.59□□□□□ -1.83
ATXN3-223ENST00000553686 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms