RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 A6NED7 52 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 SDCBPO00560 298 aaPredicted RBP2.32□□□□□ -2.04
TDP1-207ENST00000553617 ZNF737O75373 536 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 IGHV1-69P01742 117 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 IL5P05113 134 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 CCL3P10147 92 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 PTHLHP12272 177 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 CCL4P13236 92 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 CCL5P13501 91 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 SLC25A16P16260 332 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 CBLN1P23435 193 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 CKS2P33552 79 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 FAUP35544 74 aaKnown RBP2.32□□□□□ -2.04
TDP1-207ENST00000553617 ZNF322Q6U7Q0 402 aaPredicted RBP2.32□□□□□ -2.04
TDP1-207ENST00000553617 ATP11AUNQ6ZP68 121 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 CNEP1R1Q8N9A8 125 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 C15orf53Q8NAA6 179 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 TSKUQ8WUA8 353 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 CLEC2BQ92478 149 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 FGF13Q92913 245 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 SPTSSAQ969W0 71 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 DOCK1Q14185 1865 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 COL1A2P08123 1366 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 CRB1P82279 1406 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 GOLGA3Q08378 1498 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 MYO5AQ9Y4I1 1855 aaKnown RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 IGLV3-9A0A075B6K5 115 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 TRBV7-7A0A0K0K1E9 115 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 UBE2L5PA0A1B0GUS4 154 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 SLC25A20O43772 301 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 IGKCP01834 107 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 SAA1P0DJI8 122 aaPredicted RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 COL8A2P25067 703 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 PEBP1P30086 187 aaKnown RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 SSR2P43308 183 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 ATP5EP56381 51 aaPredicted RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 UBE2L3P68036 154 aaKnown RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 FUT5Q11128 374 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 C12orf73Q69YU5 71 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 ZNF660Q6AZW8 331 aaPredicted RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 C16orf47Q6ZP98 133 aaPredicted RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 ADM2Q7Z4H4 148 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 PFN4Q8NHR9 129 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 FAM213BQ8TBF2 198 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 PPDPFLQ8WWR9 84 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 CHCHD1Q96BP2 118 aaKnown RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 IMMP2LQ96T52 175 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 NABP2Q9BQ15 211 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 MYO9BQ13459 2157 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 ZNF407Q9C0G0 2248 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 ANKRD50Q9ULJ7 1429 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 SLIT3O75094 1523 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 TOP2AP11388 1531 aaKnown RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 UGGT2Q9NYU1 1516 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 MROH1Q8NDA8 1641 aa2.31□□□□□ -2.04
TDP1-207ENST00000553617 MARF1Q9Y4F3 1742 aaKnown RBP2.31□□□□□ -2.04
TDP1-207ENST00000553617 IGKV6D-41A0A0C4DH26 115 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 A0A1W2PPM0 123 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 hADV29S1A0JD25 119 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 TMEM235A6NFC5 223 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 A6NN06 94 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 C17orf51A8MQB3 221 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 A8MWP4 228 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 ATOX1O00244 68 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 LYRM1O43325 122 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 LHBP01229 141 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 TRGV3P03979 118 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 INSL4Q14641 139 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 MIAQ16674 131 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 LGALSLQ3ZCW2 172 aaPredicted RBP2.3□□□□□ -2.04
TDP1-207ENST00000553617 BVES-AS1Q5T3Y7 98 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 C5orf38Q86SI9 138 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 CCL4L1Q8NHW4 92 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 UPK3BQ9BT76 320 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 LY96Q9Y6Y9 160 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 C10orf71Q711Q0 1435 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 ANKARQ7Z5J8 1434 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 FANCD2Q9BXW9 1451 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 DIP2BQ9P265 1576 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 ROBO1Q9Y6N7 1651 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 KNDC1Q76NI1 1749 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 SUPT6HQ7KZ85 1726 aaKnown RBP2.3□□□□□ -2.04
TDP1-207ENST00000553617 COL18A1P39060 1754 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 RGPD4Q7Z3J3 1758 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 PTPRBP23467 1997 aa2.3□□□□□ -2.04
TDP1-207ENST00000553617 PLXNA4Q9HCM2 1894 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 ARHGEF28Q8N1W1 1705 aaKnown RBP2.29□□□□□ -2.04
TDP1-207ENST00000553617 TRPM1Q7Z4N2 1603 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 EPRSP07814 1512 aaKnown RBP2.29□□□□□ -2.04
TDP1-207ENST00000553617 RIC1Q4ADV7 1423 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 C19orf71A6NCJ1 209 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 SH2D1AO60880 128 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 NPYP01303 97 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 IGKV1D-33P01593 117 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 IGKV1-33P01594 117 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 ADCYAP1P18509 176 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 ETDBQ3ZM63 59 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 ASB16-AS1Q495Z4 193 aa2.29□□□□□ -2.04
TDP1-207ENST00000553617 SPATA45Q537H7 98 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms