RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CCDC168Q8NDH2 2452 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 IGHV3-35A0A0C4DH35 117 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 NDUFA4O00483 81 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 CKS2P33552 79 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 BATFQ16520 125 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 C8orf86Q6ZUL3 223 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 PMCHL2Q9BQD1 86 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 TMEM208Q9BTX3 173 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 LINC01546A6NGU7 62 aa9.92□□□□□ -0.82
SHMT2-205ENST00000553474 LINC01548A6NM66 108 aa9.92□□□□□ -0.82
SHMT2-205ENST00000553474 TCF21O43680 179 aa9.92□□□□□ -0.82
SHMT2-205ENST00000553474 HLA-DMBP28068 263 aa9.92□□□□□ -0.82
SHMT2-205ENST00000553474 IFI27P40305 119 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-205ENST00000553474 DEFB113Q30KQ7 82 aa9.92□□□□□ -0.82
SHMT2-205ENST00000553474 PSMG4Q5JS54 123 aa9.92□□□□□ -0.82
SHMT2-205ENST00000553474 SLC25A34Q6PIV7 304 aa9.92□□□□□ -0.82
SHMT2-205ENST00000553474 LINC00173Q6ZV60 143 aa9.92□□□□□ -0.82
SHMT2-205ENST00000553474 NOTCH2Q04721 2471 aa9.92□□□□□ -0.82
SHMT2-205ENST00000553474 IGHG2P01859 326 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 HBDP02042 147 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 TRGV3P03979 118 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 LGALS9BQ3B8N2 356 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 PRR31Q5SQ13 230 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 LGALS9CQ6DKI2 356 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 ZNF575Q86XF7 245 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 ZNF580Q9UK33 172 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 SETXQ7Z333 2677 aaKnown RBP9.91□□□□□ -0.82
SHMT2-205ENST00000553474 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 TRAV40A0A0B4J280 105 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 GATA3P23771 443 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 ARL3P36405 182 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 IGFL4Q6B9Z1 124 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 GLMPQ8WWB7 406 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 AGPAT4-IT1Q9H0P7 198 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 NXT2Q9NPJ8 142 aaKnown RBP9.91□□□□□ -0.82
SHMT2-205ENST00000553474 SCRT2Q9NQ03 307 aa9.91□□□□□ -0.82
SHMT2-205ENST00000553474 BEX4Q9NWD9 120 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-205ENST00000553474 IGHV3OR16-8A0A075B7F1 116 aa9.9□□□□□ -0.82
SHMT2-205ENST00000553474 IGHV4-61A0A0C4DH41 118 aa9.9□□□□□ -0.82
SHMT2-205ENST00000553474 PRAC2D3DTV9 90 aa9.9□□□□□ -0.82
SHMT2-205ENST00000553474 DSCR9P59020 149 aa9.9□□□□□ -0.82
SHMT2-205ENST00000553474 IL17RELQ6ZVW7 336 aa9.9□□□□□ -0.82
SHMT2-205ENST00000553474 TMEM219Q86XT9 240 aa9.9□□□□□ -0.82
SHMT2-205ENST00000553474 ORAOV1Q8WV07 137 aa9.9□□□□□ -0.82
SHMT2-205ENST00000553474 MAP1LC3AQ9H492 121 aa9.9□□□□□ -0.82
SHMT2-205ENST00000553474 ABCA2Q9BZC7 2435 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 CSMD1Q96PZ7 3565 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 IGHV4-4A0A075B6R2 117 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 A0A096LNJ9 63 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 A0A0G2JLM5 398 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 PDZD2O15018 2839 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 PPIFP30405 207 aaKnown RBP9.89□□□□□ -0.83
SHMT2-205ENST00000553474 CACNG7P62955 275 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 ERCC8Q13216 396 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 C12orf54Q6X4T0 127 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 SMIM15Q7Z3B0 74 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 DEFB125Q8N687 156 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 RNF182Q8N6D2 247 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 STPG4Q8N801 248 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 OR1N2Q8NGR9 330 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 GOLT1BQ9Y3E0 138 aa9.89□□□□□ -0.83
SHMT2-205ENST00000553474 MAP1AP78559 2803 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-205ENST00000553474 TRBV7-9A0A0J9YWB2 115 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 A6NDX4 124 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 MSMBP08118 114 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 Q5PR19 223 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 RNF185Q96GF1 192 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 C16orf92Q96LL3 132 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 LINC00477Q96M19 166 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 hDV102S1A0JD36 115 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 OVOL1O14753 267 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 NPYP01303 97 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 SAMD13Q5VXD3 122 aa9.88□□□□□ -0.83
SHMT2-205ENST00000553474 IGKV3D-20A0A0C4DH25 116 aa9.87□□□□□ -0.83
SHMT2-205ENST00000553474 LOC389332A0A1B0GUA5 103 aa9.87□□□□□ -0.83
SHMT2-205ENST00000553474 SNAI2O43623 268 aa9.87□□□□□ -0.83
SHMT2-205ENST00000553474 COX8AP10176 69 aa9.87□□□□□ -0.83
SHMT2-205ENST00000553474 HINT1P49773 126 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-205ENST00000553474 BRD3OSQ6XYD6 125 aa9.87□□□□□ -0.83
SHMT2-205ENST00000553474 PRRC2AP48634 2157 aaKnown RBP9.87□□□□□ -0.83
SHMT2-205ENST00000553474 IGHV3-66A0A0C4DH42 116 aa9.86□□□□□ -0.83
SHMT2-205ENST00000553474 B4DSR2 109 aa9.86□□□□□ -0.83
SHMT2-205ENST00000553474 PRB4P10163 310 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-205ENST00000553474 PRSS57Q6UWY2 283 aa9.86□□□□□ -0.83
SHMT2-205ENST00000553474 LRRC75A-AS1Q8N1F1 130 aa9.86□□□□□ -0.83
SHMT2-205ENST00000553474 MYO9AB2RTY4 2548 aa9.86□□□□□ -0.83
SHMT2-205ENST00000553474 ZNF738Q8NE65 137 aa9.86□□□□□ -0.83
SHMT2-205ENST00000553474 IFI27L1Q96BM0 104 aa9.86□□□□□ -0.83
SHMT2-205ENST00000553474 IGHV4-30-2A0A087WSY4 118 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 H3BUX3 64 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 TNFRSF6BO95407 300 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 IGLV1-40P01703 118 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 IGHV4-38-2P0DP08 117 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 MED14OSP0DP75 135 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 FCER1GP30273 86 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 TFPI2P48307 235 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 LOXL1Q08397 574 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-205ENST00000553474 FAM106AQ4KMX7 169 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 OR8A1Q8NGG7 326 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 OR10J6PQ8NGY7 276 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms