RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 SH2D6Q7Z4S9 175 aa9.65□□□□□ -0.86
HDAC7-230ENST00000552960 SIGMAR1Q99720 223 aa9.65□□□□□ -0.86
HDAC7-230ENST00000552960 MAP1LC3AQ9H492 121 aa9.65□□□□□ -0.86
HDAC7-230ENST00000552960 ZNF493Q6ZR52 646 aa9.65□□□□□ -0.87
HDAC7-230ENST00000552960 IGHV3-66A0A0C4DH42 116 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 FBXL19-AS1Q494R0 122 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 ZC2HC1BQ5TFG8 222 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 AMTNQ6UX39 209 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 LCNL1Q6ZST4 164 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 NEGR1Q7Z3B1 354 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 IGLV1-47P01700 117 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 ERCC8Q13216 396 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 WFDC2Q14508 124 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 ZNF672Q499Z4 452 aaPredicted RBP9.64□□□□□ -0.87
HDAC7-230ENST00000552960 PRR25Q96S07 402 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 FBN2P35556 2912 aa9.64□□□□□ -0.87
HDAC7-230ENST00000552960 ETDBQ3ZM63 59 aa9.63□□□□□ -0.87
HDAC7-230ENST00000552960 PVRIGQ6DKI7 326 aa9.63□□□□□ -0.87
HDAC7-230ENST00000552960 CHAC1Q9BUX1 264 aa9.63□□□□□ -0.87
HDAC7-230ENST00000552960 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
HDAC7-230ENST00000552960 OR5A1Q8NGJ0 315 aa9.63□□□□□ -0.87
HDAC7-230ENST00000552960 TMEM158Q8WZ71 300 aa9.63□□□□□ -0.87
HDAC7-230ENST00000552960 NOTCH3Q9UM47 2321 aa9.63□□□□□ -0.87
HDAC7-230ENST00000552960 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.63□□□□□ -0.87
HDAC7-230ENST00000552960 UFC1Q9Y3C8 167 aa9.63□□□□□ -0.87
HDAC7-230ENST00000552960 TRAV40A0A0B4J280 105 aa9.62□□□□□ -0.87
HDAC7-230ENST00000552960 KLRD1Q13241 179 aa9.62□□□□□ -0.87
HDAC7-230ENST00000552960 C8orf31Q8N9H6 132 aa9.62□□□□□ -0.87
HDAC7-230ENST00000552960 DPF1Q92782 380 aa9.62□□□□□ -0.87
HDAC7-230ENST00000552960 IGHV3-49A0A0A0MS15 119 aa9.62□□□□□ -0.87
HDAC7-230ENST00000552960 B9A039 149 aa9.62□□□□□ -0.87
HDAC7-230ENST00000552960 TNFRSF13BO14836 293 aaPredicted RBP9.62□□□□□ -0.87
HDAC7-230ENST00000552960 SFTA2Q6UW10 78 aa9.62□□□□□ -0.87
HDAC7-230ENST00000552960 TNFRSF14Q92956 283 aa9.62□□□□□ -0.87
HDAC7-230ENST00000552960 KLK15Q9H2R5 256 aa9.62□□□□□ -0.87
HDAC7-230ENST00000552960 TMEM8BA6NDV4 472 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 TNFRSF6BO95407 300 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 IGKCP01834 107 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 MFAP4P55083 255 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 UBTD1Q9HAC8 227 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 TRBV25-1A0A075B6N4 114 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 TRAV26-2A0A0B4J265 109 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 H3BMG7 143 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 J3KRW8 73 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 NAV2Q8IVL1 2488 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 RNF182Q8N6D2 247 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 U3KQK5 164 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 WI2-2373I1.2A0A1W2PRP0 233 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
HDAC7-230ENST00000552960 SIVA1O15304 175 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 BMI1P35226 326 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 ITLN2Q8WWU7 325 aaPredicted RBP9.61□□□□□ -0.87
HDAC7-230ENST00000552960 ARPC1AQ92747 370 aa9.61□□□□□ -0.87
HDAC7-230ENST00000552960 TRBV6-1A0A0K0K1D8 114 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 GAGE12HA6NDE8 117 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 NBR2O15453 112 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 NDUFA3O95167 84 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 ODF1Q14990 250 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 ZNF562Q6V9R5 426 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 C21orf62Q9NYP8 219 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 PRSS47A8MTI9 375 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 RPL7P18124 248 aaKnown RBP9.6□□□□□ -0.87
HDAC7-230ENST00000552960 ATP5G2Q06055 141 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 GATD1Q8NB37 220 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 DOPEY1Q5JWR5 2465 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 KAAG1Q9UBP8 84 aa9.6□□□□□ -0.87
HDAC7-230ENST00000552960 BBC3Q96PG8 261 aaPredicted RBP9.59□□□□□ -0.87
HDAC7-230ENST00000552960 MRPL35Q9NZE8 188 aaKnown RBP9.59□□□□□ -0.87
HDAC7-230ENST00000552960 MYO9AB2RTY4 2548 aa9.59□□□□□ -0.87
HDAC7-230ENST00000552960 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
HDAC7-230ENST00000552960 HIST1H4GQ99525 98 aa9.59□□□□□ -0.87
HDAC7-230ENST00000552960 HHLA3Q9XRX5 114 aa9.59□□□□□ -0.87
HDAC7-230ENST00000552960 FABP5P3A8MUU1 101 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 SPRY2O43597 315 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 DPM2O94777 84 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 RAB9AP51151 201 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 DYNAPQ8N1N2 210 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 RNF185Q96GF1 192 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 RAB1BQ9H0U4 201 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 CHD6Q8TD26 2715 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 ZANQ9Y493 2812 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 A0A1B0GV72 72 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 SMIM17P0DL12 118 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 INSL3P51460 131 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 EFNA4P52798 201 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 PAX8Q06710 450 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 PDE6HQ13956 83 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 DTX2Q86UW9 622 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 TRGV3P03979 118 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 IL17RELQ6ZVW7 336 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 MYOZ3Q8TDC0 251 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 ZNF479Q96JC4 524 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 FANCD2OSQ96PS1 177 aa9.58□□□□□ -0.88
HDAC7-230ENST00000552960 IGHV3OR16-10A0A075B7F0 116 aa9.57□□□□□ -0.88
HDAC7-230ENST00000552960 CEACAM3P40198 252 aa9.57□□□□□ -0.88
HDAC7-230ENST00000552960 CKS1BP61024 79 aa9.57□□□□□ -0.88
HDAC7-230ENST00000552960 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
HDAC7-230ENST00000552960 DEFB104AQ8WTQ1 72 aa9.57□□□□□ -0.88
HDAC7-230ENST00000552960 DPM3Q9P2X0 92 aa9.57□□□□□ -0.88
HDAC7-230ENST00000552960 NDPQ00604 133 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms