RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 ZNF562Q6V9R5 426 aa9.05□□□□□ -0.96
PPFIA2-227ENST00000552948 PGPEP1Q9NXJ5 209 aa9.05□□□□□ -0.96
PPFIA2-227ENST00000552948 F5H697 171 aa9.04□□□□□ -0.96
PPFIA2-227ENST00000552948 TRGV3P03979 118 aa9.04□□□□□ -0.96
PPFIA2-227ENST00000552948 C16orf92Q96LL3 132 aa9.04□□□□□ -0.96
PPFIA2-227ENST00000552948 HOXA3O43365 443 aaPredicted RBP9.04□□□□□ -0.96
PPFIA2-227ENST00000552948 CKS1BP61024 79 aa9.04□□□□□ -0.96
PPFIA2-227ENST00000552948 AGRNO00468 2067 aa9.04□□□□□ -0.96
PPFIA2-227ENST00000552948 NDUFS8O00217 210 aa9.04□□□□□ -0.96
PPFIA2-227ENST00000552948 SRSF1Q07955 248 aaKnown RBP eCLIP9.04□□□□□ -0.96
PPFIA2-227ENST00000552948 THBDP07204 575 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 NDPQ00604 133 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 PLA2G2CQ5R387 149 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 MAPKAPK5-AS1Q8N8E1 139 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 CFHR4Q92496 578 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 SMPXQ9UHP9 88 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 MUC3AQ02505 3323 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 ZNF815PA8K554 130 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 B9A039 149 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 C15orf32Q32M92 178 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 Q6ZS92 163 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 CHTOPQ9Y3Y2 248 aaKnown RBP9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 NOTCH3Q9UM47 2321 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 C8orf31Q8N9H6 132 aa9.03□□□□□ -0.96
PPFIA2-227ENST00000552948 CEACAM4O75871 244 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 CRYGBP07316 175 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 C3orf36Q3SXR2 165 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 FOXI2Q6ZQN5 318 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 Q8N8P6 123 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 PHLDA3Q9Y5J5 127 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 ZFHX4Q86UP3 3567 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 F8W1H4 67 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 ZNF672Q499Z4 452 aaPredicted RBP9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 GLMPQ8WWB7 406 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 LINC00527Q9UJ94 153 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 PSMG4Q5JS54 123 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 KAAG1Q9UBP8 84 aa9.02□□□□□ -0.97
PPFIA2-227ENST00000552948 DMXL2Q8TDJ6 3036 aa9.01□□□□□ -0.97
PPFIA2-227ENST00000552948 SPAG8Q99932 426 aaPredicted RBP9.01□□□□□ -0.97
PPFIA2-227ENST00000552948 ADGRG4Q8IZF6 3080 aa9.01□□□□□ -0.97
PPFIA2-227ENST00000552948 TRBV6-1A0A0K0K1D8 114 aa9.01□□□□□ -0.97
PPFIA2-227ENST00000552948 WI2-2373I1.2A0A1W2PRP0 233 aa9.01□□□□□ -0.97
PPFIA2-227ENST00000552948 Q1RN00 199 aa9.01□□□□□ -0.97
PPFIA2-227ENST00000552948 LINC01549A6NIU2 74 aa9.01□□□□□ -0.97
PPFIA2-227ENST00000552948 RAB9AP51151 201 aa9.01□□□□□ -0.97
PPFIA2-227ENST00000552948 C14orf178Q8N769 122 aaPredicted RBP9.01□□□□□ -0.97
PPFIA2-227ENST00000552948 TMEM238LA0A1B0GVL6 79 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 A6NJY4 79 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 FANCD2OSQ96PS1 177 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 METTL26Q96S19 204 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 U3KQK5 164 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 SPG11Q96JI7 2443 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 INSL3P51460 131 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 TMEM170BQ5T4T1 132 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 CCDC144NLQ6NUI1 221 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 C16orf54Q6UWD8 224 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 SYT8Q8NBV8 401 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 RNF185Q96GF1 192 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 ATP6V0BQ99437 205 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 H7C1H1 209 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 RNF5Q99942 180 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 AGPAT4-IT1Q9H0P7 198 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 HHLA3Q9XRX5 114 aa9□□□□□ -0.97
PPFIA2-227ENST00000552948 HOXB4P17483 251 aaPredicted RBP8.99□□□□□ -0.97
PPFIA2-227ENST00000552948 HIGD1BQ9P298 99 aa8.99□□□□□ -0.97
PPFIA2-227ENST00000552948 ANKRD11Q6UB99 2663 aaPredicted RBP8.99□□□□□ -0.97
PPFIA2-227ENST00000552948 PLNP26678 52 aa8.99□□□□□ -0.97
PPFIA2-227ENST00000552948 PRR30Q53SZ7 412 aaPredicted RBP8.99□□□□□ -0.97
PPFIA2-227ENST00000552948 IGLC6P0CF74 106 aa8.99□□□□□ -0.97
PPFIA2-227ENST00000552948 HLA-DRB4P13762 266 aa8.99□□□□□ -0.97
PPFIA2-227ENST00000552948 RRN3P1Q2M238 152 aa8.99□□□□□ -0.97
PPFIA2-227ENST00000552948 C20orf78Q9BR46 151 aa8.99□□□□□ -0.97
PPFIA2-227ENST00000552948 HLA-DRB4X5D2U9 266 aa8.99□□□□□ -0.97
PPFIA2-227ENST00000552948 CTSGP08311 255 aa8.98□□□□□ -0.97
PPFIA2-227ENST00000552948 SPANXB1Q9NS25 103 aaPredicted RBP8.98□□□□□ -0.97
PPFIA2-227ENST00000552948 A0A087WX48 190 aa8.98□□□□□ -0.97
PPFIA2-227ENST00000552948 SPINK8P0C7L1 97 aa8.98□□□□□ -0.97
PPFIA2-227ENST00000552948 SLC25A16P16260 332 aa8.98□□□□□ -0.97
PPFIA2-227ENST00000552948 TACC2O95359 2948 aa8.98□□□□□ -0.97
PPFIA2-227ENST00000552948 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
PPFIA2-227ENST00000552948 IGLV11-55A0A075B6I3 123 aa8.98□□□□□ -0.97
PPFIA2-227ENST00000552948 SHISA9B4DS77 424 aa8.98□□□□□ -0.97
PPFIA2-227ENST00000552948 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
PPFIA2-227ENST00000552948 IGHV3OR16-10A0A075B7F0 116 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 MYMXA0A1B0GTQ4 84 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 F8VRH5 84 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 G3V318 75 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 KLHL30-AS1Q8NEE0 82 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 PTH2Q96A98 100 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 SRSF8Q9BRL6 282 aaKnown RBP8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 BEX4Q9NWD9 120 aaPredicted RBP8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 E9PLD3 99 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 HERVK_113P61574 105 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 Q6ZQT7 251 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 MRPS12O15235 138 aaKnown RBP8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 FAM74A4Q5TZK3 123 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 DLX4Q92988 240 aaPredicted RBP8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 KALRNO60229 2985 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 IGKV3D-20A0A0C4DH25 116 aa8.97□□□□□ -0.97
PPFIA2-227ENST00000552948 VMO1Q7Z5L0 202 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms