RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 ACBD7Q8N6N7 88 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 ZNF439Q8NDP4 499 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 ZNF555Q8NEP9 628 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 OR51A4Q8NGJ6 313 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 OR10AC1Q8NH08 325 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 DTD1Q8TEA8 209 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 FXYD5Q96DB9 178 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 YPEL4Q96NS1 127 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 ANAPC13Q9BS18 74 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 THTPAQ9BU02 230 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 MAP1LC3AQ9H492 121 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 TAS2R4Q9NYW5 299 aa2.1□□□□□ -2.07
PTCH1-216ENST00000548379 TANC2Q9HCD6 1990 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 EPPK1P58107 5090 aaKnown RBP2.09□□□□□ -2.07
PTCH1-216ENST00000548379 IZUMO1RA6ND01 250 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 OR4C45A6NMZ5 311 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 MFNGO00587 321 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 CYB5BO43169 146 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 GGCTO75223 188 aaKnown RBP2.09□□□□□ -2.07
PTCH1-216ENST00000548379 IGKV1-17P01599 117 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 SCTP09683 121 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 RNASE2P10153 161 aaKnown RBP2.09□□□□□ -2.07
PTCH1-216ENST00000548379 TGFBR1P36897 503 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 AP3S2P59780 193 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 SNRPGP62308 76 aaKnown RBP2.09□□□□□ -2.07
PTCH1-216ENST00000548379 RTL8BQ17RB0 113 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 DEFB114Q30KQ6 69 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 VMA21Q3ZAQ7 101 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 CCDC58Q4VC31 144 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 ACSM3Q53FZ2 586 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 RPL39P5Q59GN2 51 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 GLIPR1L1Q6UWM5 242 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 PP632Q6XCG6 107 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 OR5H2Q8NGV7 314 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 ASB13Q8WXK3 278 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 ACOT12Q8WYK0 555 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 ZNF436Q9C0F3 470 aaPredicted RBP2.09□□□□□ -2.07
PTCH1-216ENST00000548379 VSIRQ9H7M9 311 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 POMPQ9Y244 141 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 UFC1Q9Y3C8 167 aa2.09□□□□□ -2.07
PTCH1-216ENST00000548379 RBM7Q9Y580 266 aaKnown RBP2.09□□□□□ -2.07
PTCH1-216ENST00000548379 ZNF706Q9Y5V0 76 aaPredicted RBP2.09□□□□□ -2.07
PTCH1-216ENST00000548379 RYR2Q92736 4967 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 TENM2Q9NT68 2774 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 IRGMA1A4Y4 181 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 OR4C46A6NHA9 309 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 C2orf70A6NJV1 201 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 IGLL5B9A064 214 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 TMEM250H0YL14 139 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 IGKV1-16P04430 117 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 UBBP0CG47 229 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 SCGB1C2P0DMR2 95 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 DEFA4P12838 97 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 HIST1H1BP16401 226 aaKnown RBP2.08□□□□□ -2.08
PTCH1-216ENST00000548379 MYL12AP19105 171 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 CBLN1P23435 193 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 SERPINB10P48595 397 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 RBX1P62877 108 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 GNGT1P63211 74 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 RHOGP84095 191 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 HMGN3Q15651 99 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 DEFB135Q30KP9 77 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 RPL22L1Q6P5R6 122 aaKnown RBP2.08□□□□□ -2.08
PTCH1-216ENST00000548379 FA2HQ7L5A8 372 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 GPHB5Q86YW7 130 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.08□□□□□ -2.08
PTCH1-216ENST00000548379 OR4A5Q8NH83 315 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 MRPL30Q8TCC3 161 aaKnown RBP2.08□□□□□ -2.08
PTCH1-216ENST00000548379 SCGB1C1Q8TD33 95 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 CYGBQ8WWM9 190 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 ABHD14BQ96IU4 210 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 DERL3Q96Q80 235 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 GABARAPL1Q9H0R8 117 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 WFDC10AQ9H1F0 79 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 BANF2Q9H503 90 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 ZNF230Q9UIE0 474 aaPredicted RBP2.08□□□□□ -2.08
PTCH1-216ENST00000548379 AP4S1Q9Y587 144 aa2.08□□□□□ -2.08
PTCH1-216ENST00000548379 DNAH3Q8TD57 4116 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 TRBV7-1A0A0A6YYK4 115 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 TCRBV3S1A0A5B6 114 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 PPP5D1E7EU14 171 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 J3QRE1 110 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 MRPS14O60783 128 aaKnown RBP2.07□□□□□ -2.08
PTCH1-216ENST00000548379 ARL6IP5O75915 188 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 IFNA21P01568 189 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 IFNA17P01571 189 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 IGLV7-43P04211 117 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 OR5AC1P0C628 307 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 SEC11BP0C7V7 166 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 LINC00614P0C842 121 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 APELAP0DMC3 54 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 P0DMU3 169 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 FAM231AP0DMU4 169 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 FAM231CP0DMU5 169 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 PSMA1P25786 263 aaKnown RBP2.07□□□□□ -2.08
PTCH1-216ENST00000548379 RPL12P30050 165 aaKnown RBP2.07□□□□□ -2.08
PTCH1-216ENST00000548379 MP68P56378 58 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 HLA-DRB3P79483 266 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 DEFA5Q01523 94 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 PPP1R1AQ13522 171 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms