RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 PIP4P2Q8N4L2 257 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 TIMM9Q9Y5J7 89 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 TRACP01848 142 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 GRNP28799 593 aaKnown RBP8.73□□□□□ -1.01
CDH3-203ENST00000542274 MFAP2P55001 183 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 TMEM258P61165 79 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 HBG1P69891 147 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 HBG2P69892 147 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 CEMP1Q6PRD7 247 aaPredicted RBP8.73□□□□□ -1.01
CDH3-203ENST00000542274 C1orf229Q6ZS94 237 aaPredicted RBP8.73□□□□□ -1.01
CDH3-203ENST00000542274 NPIPB3Q92617 1050 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 NDUFS7O75251 213 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 CD40P25942 277 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 ZNF134P52741 427 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 CCL8P80075 99 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 SPANXN5Q5MJ07 72 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 VKORC1Q9BQB6 163 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 ZNF747Q9BV97 191 aa8.73□□□□□ -1.01
CDH3-203ENST00000542274 hADV29S1A0JD25 119 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 C9JCJ5 164 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 SYNGR2O43760 224 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 EIF4EBP1Q13541 118 aaPredicted RBP8.72□□□□□ -1.01
CDH3-203ENST00000542274 RPL39P5Q59GN2 51 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 SBSPONQ8IVN8 264 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 VKORC1L1Q8N0U8 176 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 LINC01561Q8N1V8 128 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 LINC00482Q8N8I6 264 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 ZNRD1Q9P1U0 126 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 LY96Q9Y6Y9 160 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 IGHV1-46P01743 117 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 MOB3BQ86TA1 216 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 WFDC11Q8NEX6 87 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 PSENENQ9NZ42 101 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 GNG12Q9UBI6 72 aa8.72□□□□□ -1.01
CDH3-203ENST00000542274 RAI1Q7Z5J4 1906 aaPredicted RBP8.71□□□□□ -1.01
CDH3-203ENST00000542274 IGLV3-9A0A075B6K5 115 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 TRAV13-1A0A0B4J241 112 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 FCGR3BO75015 233 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 GCHFRP30047 84 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 BSPH1Q075Z2 132 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 MORN3Q6PF18 240 aaPredicted RBP8.71□□□□□ -1.01
CDH3-203ENST00000542274 FAM90A1Q86YD7 464 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 APRG1Q8IVJ8 170 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 FAM216BQ8N7L0 139 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 POM121L12Q8N7R1 296 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 TTTY13Q9BZ97 58 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 OSTCQ9NRP0 149 aa8.71□□□□□ -1.01
CDH3-203ENST00000542274 LOC107984156A0A0G2JMH3 177 aa8.71□□□□□ -1.02
CDH3-203ENST00000542274 C15orf62A8K5M9 175 aa8.71□□□□□ -1.02
CDH3-203ENST00000542274 AVPP01185 164 aa8.71□□□□□ -1.02
CDH3-203ENST00000542274 COX7CP15954 63 aa8.71□□□□□ -1.02
CDH3-203ENST00000542274 ZNF138P52744 262 aa8.71□□□□□ -1.02
CDH3-203ENST00000542274 SFTA2Q6UW10 78 aa8.71□□□□□ -1.02
CDH3-203ENST00000542274 ARL17AQ8IVW1 177 aa8.71□□□□□ -1.02
CDH3-203ENST00000542274 C10orf105Q8TEF2 133 aa8.71□□□□□ -1.02
CDH3-203ENST00000542274 CCL13Q99616 98 aa8.71□□□□□ -1.02
CDH3-203ENST00000542274 CYSTM1Q9H1C7 97 aa8.71□□□□□ -1.02
CDH3-203ENST00000542274 TRBV25-1A0A075B6N4 114 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 TRBV7-7A0A0K0K1E9 115 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 IL4P05112 153 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 ZFP2Q6ZN57 461 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 LINC01560Q8TB33 94 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 LINC00527Q9UJ94 153 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 TANC2Q9HCD6 1990 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 LHBP01229 141 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 AMN1Q8IY45 258 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 LINC00311Q8N616 119 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 TXNDC17Q9BRA2 123 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 ARFGEF3Q5TH69 2177 aa8.7□□□□□ -1.02
CDH3-203ENST00000542274 SHISA9B4DS77 424 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 HAX1O00165 279 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 SPINT2O43291 252 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 ELANEP08246 267 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 CD24P25063 80 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 MYCNOSP40205 109 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 EFNA4P52798 201 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 LINC01620Q4KN68 170 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 TMEM155Q4W5P6 130 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 OR8A1Q8NGG7 326 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 HEYLQ9NQ87 328 aaPredicted RBP8.69□□□□□ -1.02
CDH3-203ENST00000542274 SPTAN1Q13813 2472 aaKnown RBP8.69□□□□□ -1.02
CDH3-203ENST00000542274 H7C1H1 209 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 DPM2O94777 84 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 HLA-DRB4P13762 266 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 LOXL3P58215 753 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 PQLC2Q6ZP29 291 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 PLEKHB2Q96CS7 222 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 RPUSD1Q9UJJ7 312 aaKnown RBP8.69□□□□□ -1.02
CDH3-203ENST00000542274 HLA-DRB4X5D2U9 266 aa8.69□□□□□ -1.02
CDH3-203ENST00000542274 HRNRQ86YZ3 2850 aaPredicted RBP8.69□□□□□ -1.02
CDH3-203ENST00000542274 TRAV3A0A0B4J244 114 aa8.68□□□□□ -1.02
CDH3-203ENST00000542274 C17orf58Q2M2W7 97 aa8.68□□□□□ -1.02
CDH3-203ENST00000542274 MGST3O14880 152 aa8.68□□□□□ -1.02
CDH3-203ENST00000542274 P0C879 139 aa8.68□□□□□ -1.02
CDH3-203ENST00000542274 CACNG7P62955 275 aa8.68□□□□□ -1.02
CDH3-203ENST00000542274 LGALS9BQ3B8N2 356 aa8.68□□□□□ -1.02
CDH3-203ENST00000542274 CENPWQ5EE01 88 aa8.68□□□□□ -1.02
CDH3-203ENST00000542274 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms