RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SFTA3P0C7M3 94 aa13.56□□□□□ -0.24
DDX11-220ENST00000542244 BTF3P20290 206 aaKnown RBP13.56□□□□□ -0.24
DDX11-220ENST00000542244 CRYBA4P53673 196 aa13.56□□□□□ -0.24
DDX11-220ENST00000542244 RANP62826 216 aaKnown RBP13.56□□□□□ -0.24
DDX11-220ENST00000542244 NMES1Q9C002 83 aa13.56□□□□□ -0.24
DDX11-220ENST00000542244 SIVA1O15304 175 aa13.55□□□□□ -0.24
DDX11-220ENST00000542244 NMBP08949 121 aa13.55□□□□□ -0.24
DDX11-220ENST00000542244 LYPD5Q6UWN5 251 aa13.55□□□□□ -0.24
DDX11-220ENST00000542244 SLC25A31Q9H0C2 315 aa13.55□□□□□ -0.24
DDX11-220ENST00000542244 SCRT2Q9NQ03 307 aa13.55□□□□□ -0.24
DDX11-220ENST00000542244 UPK1BO75841 260 aa13.54□□□□□ -0.24
DDX11-220ENST00000542244 ZNF479Q96JC4 524 aa13.54□□□□□ -0.24
DDX11-220ENST00000542244 MRPL32Q9BYC8 188 aaKnown RBP13.54□□□□□ -0.24
DDX11-220ENST00000542244 SMIM3Q9BZL3 60 aa13.54□□□□□ -0.24
DDX11-220ENST00000542244 ICOSQ9Y6W8 199 aa13.54□□□□□ -0.24
DDX11-220ENST00000542244 OR7C2O60412 319 aa13.53□□□□□ -0.24
DDX11-220ENST00000542244 ENKURQ8TC29 256 aa13.53□□□□□ -0.24
DDX11-220ENST00000542244 ARPC5LQ9BPX5 153 aa13.53□□□□□ -0.24
DDX11-220ENST00000542244 WFDC1Q9HC57 220 aa13.53□□□□□ -0.24
DDX11-220ENST00000542244 PRO0255Q9UI72 69 aa13.53□□□□□ -0.24
DDX11-220ENST00000542244 HHLA3Q9XRX5 114 aa13.53□□□□□ -0.24
DDX11-220ENST00000542244 DNAH10OSP0CZ25 163 aa13.52□□□□□ -0.25
DDX11-220ENST00000542244 ZNF266Q14584 549 aa13.52□□□□□ -0.25
DDX11-220ENST00000542244 FFAR4Q5NUL3 377 aa13.52□□□□□ -0.25
DDX11-220ENST00000542244 PPP1R1CQ8WVI7 109 aa13.52□□□□□ -0.25
DDX11-220ENST00000542244 DIRC3C9JPN6 131 aa13.51□□□□□ -0.25
DDX11-220ENST00000542244 INMT-MINDY4F8WBC2 141 aa13.51□□□□□ -0.25
DDX11-220ENST00000542244 UBE2L3P68036 154 aaKnown RBP13.51□□□□□ -0.25
DDX11-220ENST00000542244 ZNF415Q09FC8 603 aa13.51□□□□□ -0.25
DDX11-220ENST00000542244 ATP5SQ99766 215 aa13.51□□□□□ -0.25
DDX11-220ENST00000542244 TMEM183BQ1AE95 376 aa13.5□□□□□ -0.25
DDX11-220ENST00000542244 WFDC10BQ8IUB3 73 aa13.5□□□□□ -0.25
DDX11-220ENST00000542244 TMEM183AQ8IXX5 376 aa13.5□□□□□ -0.25
DDX11-220ENST00000542244 TVP23CQ96ET8 276 aa13.5□□□□□ -0.25
DDX11-220ENST00000542244 HYLS1Q96M11 299 aa13.5□□□□□ -0.25
DDX11-220ENST00000542244 HSPB11Q9Y547 144 aa13.5□□□□□ -0.25
DDX11-220ENST00000542244 LOC100131303A0A0U1RQF7 123 aa13.49□□□□□ -0.25
DDX11-220ENST00000542244 RBAKDNA6NC62 111 aa13.49□□□□□ -0.25
DDX11-220ENST00000542244 GNRH2O43555 120 aa13.49□□□□□ -0.25
DDX11-220ENST00000542244 Q6AWC8 147 aa13.49□□□□□ -0.25
DDX11-220ENST00000542244 S100ZQ8WXG8 99 aa13.49□□□□□ -0.25
DDX11-220ENST00000542244 RPH3ALQ9UNE2 315 aa13.49□□□□□ -0.25
DDX11-220ENST00000542244 TRBV7-9A0A0J9YWB2 115 aa13.48□□□□□ -0.25
DDX11-220ENST00000542244 K7EQD1 137 aa13.48□□□□□ -0.25
DDX11-220ENST00000542244 MPC2O95563 127 aa13.48□□□□□ -0.25
DDX11-220ENST00000542244 LINC00299Q6ZSB3 139 aa13.48□□□□□ -0.25
DDX11-220ENST00000542244 TRGV4A0A0C4DH28 118 aa13.47□□□□□ -0.25
DDX11-220ENST00000542244 C17orf112F2Z3M2 114 aa13.47□□□□□ -0.25
DDX11-220ENST00000542244 CSN1S1P47710 185 aa13.47□□□□□ -0.25
DDX11-220ENST00000542244 MRPL23Q16540 153 aaKnown RBP13.47□□□□□ -0.25
DDX11-220ENST00000542244 NAGKQ9UJ70 344 aa13.47□□□□□ -0.25
DDX11-220ENST00000542244 TRAV8-1A0A0A6YYK1 113 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 PGPA6NDG6 321 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 F6UZH7 168 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 HMGB3O15347 200 aaKnown RBP13.46□□□□□ -0.25
DDX11-220ENST00000542244 GYPEP15421 78 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 XGP55808 180 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 GNG5P63218 68 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 NEGR1Q7Z3B1 354 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 LYPD1Q8N2G4 141 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 OR10G4Q8NGN3 311 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 RASL10AQ92737 203 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 MARVELD1Q9BSK0 173 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 KCNIP2Q9NS61 270 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 MBD2Q9UBB5 411 aa13.46□□□□□ -0.25
DDX11-220ENST00000542244 FAT1Q14517 4588 aa13.45□□□□□ -0.26
DDX11-220ENST00000542244 RPL12P30050 165 aaKnown RBP13.45□□□□□ -0.26
DDX11-220ENST00000542244 KRTAP10-1P60331 282 aa13.45□□□□□ -0.26
DDX11-220ENST00000542244 RAB2AP61019 212 aa13.45□□□□□ -0.26
DDX11-220ENST00000542244 CYCSP99999 105 aaKnown RBP13.45□□□□□ -0.26
DDX11-220ENST00000542244 IQCF2Q8IXL9 164 aa13.45□□□□□ -0.26
DDX11-220ENST00000542244 SGK494Q96LW2 274 aa13.45□□□□□ -0.26
DDX11-220ENST00000542244 A0A087WTM6 91 aa13.44□□□□□ -0.26
DDX11-220ENST00000542244 IGHV3-16A0A0C4DH30 117 aa13.44□□□□□ -0.26
DDX11-220ENST00000542244 A6NHS1 94 aa13.44□□□□□ -0.26
DDX11-220ENST00000542244 KHDC3LQ587J8 217 aa13.44□□□□□ -0.26
DDX11-220ENST00000542244 GOLT1AQ6ZVE7 132 aa13.44□□□□□ -0.26
DDX11-220ENST00000542244 SSNA1O43805 119 aa13.43□□□□□ -0.26
DDX11-220ENST00000542244 SLAQ13239 276 aa13.43□□□□□ -0.26
DDX11-220ENST00000542244 FAM159AQ6UWV7 190 aa13.43□□□□□ -0.26
DDX11-220ENST00000542244 OTORQ9NRC9 128 aa13.43□□□□□ -0.26
DDX11-220ENST00000542244 TYMSP04818 313 aa13.42□□□□□ -0.26
DDX11-220ENST00000542244 SRIP30626 198 aa13.42□□□□□ -0.26
DDX11-220ENST00000542244 TDRG1Q3Y452 100 aa13.42□□□□□ -0.26
DDX11-220ENST00000542244 SCGB1C1Q8TD33 95 aa13.42□□□□□ -0.26
DDX11-220ENST00000542244 C11orf21Q9P2W6 132 aa13.42□□□□□ -0.26
DDX11-220ENST00000542244 TRGV11A0A075B6L2 103 aa13.41□□□□□ -0.26
DDX11-220ENST00000542244 IFNA5P01569 189 aa13.41□□□□□ -0.26
DDX11-220ENST00000542244 ZNF80P51504 273 aaPredicted RBP13.41□□□□□ -0.26
DDX11-220ENST00000542244 ERVFC1-1P60608 527 aa13.41□□□□□ -0.26
DDX11-220ENST00000542244 SPXQ9BT56 116 aa13.41□□□□□ -0.26
DDX11-220ENST00000542244 PGPEP1Q9NXJ5 209 aa13.41□□□□□ -0.26
DDX11-220ENST00000542244 LENEPQ9Y5L5 61 aa13.41□□□□□ -0.26
DDX11-220ENST00000542244 LY96Q9Y6Y9 160 aa13.41□□□□□ -0.26
DDX11-220ENST00000542244 TRAV4A0A0B4J268 109 aa13.4□□□□□ -0.26
DDX11-220ENST00000542244 DPPA3Q6W0C5 159 aa13.4□□□□□ -0.26
DDX11-220ENST00000542244 TMED6Q8WW62 240 aa13.4□□□□□ -0.26
DDX11-220ENST00000542244 MSRB1Q9NZV6 116 aa13.4□□□□□ -0.26
DDX11-220ENST00000542244 TAS2R45P59539 299 aa13.39□□□□□ -0.27
DDX11-220ENST00000542244 HAMPP81172 84 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms