RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SYS1-DBNDD2H3BUS1 97 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 M0R381 172 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 HAX1O00165 279 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 S100A4P26447 101 aaKnown RBP6.72□□□□□ -1.33
UBE3B-208ENST00000538070 HIST1H1AQ02539 215 aaPredicted RBP6.72□□□□□ -1.33
UBE3B-208ENST00000538070 PRSS57Q6UWY2 283 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 AJUBAQ96IF1 538 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 C20orf144Q9BQM9 153 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 AGPAT4-IT1Q9H0P7 198 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 JMJD1CQ15652 2540 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 FABP5P3A8MUU1 101 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 BMI1P35226 326 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 CT83Q5H943 113 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 C10orf99Q6UWK7 81 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 C8orf86Q6ZUL3 223 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 TRAV9-2A0A087WT02 112 aa6.71□□□□□ -1.33
UBE3B-208ENST00000538070 C2orf70A6NJV1 201 aa6.71□□□□□ -1.33
UBE3B-208ENST00000538070 AVPP01185 164 aa6.71□□□□□ -1.33
UBE3B-208ENST00000538070 EDN2P20800 178 aa6.71□□□□□ -1.33
UBE3B-208ENST00000538070 PDE6HQ13956 83 aa6.71□□□□□ -1.33
UBE3B-208ENST00000538070 TM4SF20Q53R12 229 aa6.71□□□□□ -1.33
UBE3B-208ENST00000538070 KHDC1LQ5JSQ8 128 aa6.71□□□□□ -1.33
UBE3B-208ENST00000538070 SPANXN1Q5VSR9 72 aa6.71□□□□□ -1.33
UBE3B-208ENST00000538070 NF1P21359 2839 aa6.71□□□□□ -1.33
UBE3B-208ENST00000538070 OVOL3O00110 214 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 SMAD7O15105 426 aaKnown RBP6.71□□□□□ -1.34
UBE3B-208ENST00000538070 KLF5Q13887 457 aaPredicted RBP6.71□□□□□ -1.34
UBE3B-208ENST00000538070 MRPL51Q4U2R6 128 aaKnown RBP6.71□□□□□ -1.34
UBE3B-208ENST00000538070 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 STPG4Q8N801 248 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 SMIM12Q96EX1 92 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 GFRA4Q9GZZ7 299 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 TMEM191AQ9H0A3 160 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 LAMTOR2Q9Y2Q5 125 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 NACAE9PAV3 2078 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 H3BVH4 76 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 NPYP01303 97 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 HTN1P15515 57 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 EBI3Q14213 229 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 ORMDL3Q8N138 153 aa6.71□□□□□ -1.34
UBE3B-208ENST00000538070 MXRA5Q9NR99 2828 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 KIR3DS1Q14943 382 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 OR4X2Q8NGF9 303 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 OR10AG1Q8NH19 301 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 SIGLEC8Q9NYZ4 499 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 FBN2P35556 2912 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 CBY3A6NI87 242 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 NPIPB6E9PJ23 425 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 IGHG4P01861 327 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 ZFAND3Q9H8U3 227 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 IGHV4-59P01825 116 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 MSMBP08118 114 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 TSPOP30536 169 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 RNASE4P34096 147 aaKnown RBP6.7□□□□□ -1.34
UBE3B-208ENST00000538070 CACNG7P62955 275 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 C10orf105Q8TEF2 133 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 HSPB8Q9UJY1 196 aa6.7□□□□□ -1.34
UBE3B-208ENST00000538070 CLPSL1A2RUU4 121 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 PRSS1P07477 247 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 FAM104BQ5XKR9 115 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 PPP1R14DQ9NXH3 145 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 AGRNO00468 2067 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 RNF223E7ERA6 249 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 NUDT3O95989 172 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 MGPP08493 103 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 S100A7P31151 101 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 A0A087X0K7 114 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 NMUP48645 174 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 COL5A1-AS1Q5SY13 56 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 CHCHD1Q96BP2 118 aaKnown RBP6.69□□□□□ -1.34
UBE3B-208ENST00000538070 C11orf21Q9P2W6 132 aa6.69□□□□□ -1.34
UBE3B-208ENST00000538070 TRBV7-1A0A0A6YYK4 115 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 TCF21O43680 179 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 NPSP0C0P6 89 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 MPV17L2Q567V2 206 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 SMIM15Q7Z3B0 74 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 PIFOQ8TCI5 191 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 FAM231BA6NCW3 169 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 C20orf173Q96LM9 149 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 HIVEP2P31629 2446 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 CTRLP40313 264 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 LBHQ53QV2 105 aaPredicted RBP6.68□□□□□ -1.34
UBE3B-208ENST00000538070 C11orf44Q8N8P7 122 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 TMEM208Q9BTX3 173 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 RHPN1-AS1Q9BWJ2 59 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 NPFFR1Q9GZQ6 430 aa6.68□□□□□ -1.34
UBE3B-208ENST00000538070 LEPP41159 167 aa6.67□□□□□ -1.34
UBE3B-208ENST00000538070 DEFB112Q30KQ8 113 aa6.67□□□□□ -1.34
UBE3B-208ENST00000538070 OR10J6PQ8NGY7 276 aa6.67□□□□□ -1.34
UBE3B-208ENST00000538070 BEX4Q9NWD9 120 aaPredicted RBP6.67□□□□□ -1.34
UBE3B-208ENST00000538070 FLNAP21333 2647 aaKnown RBP6.67□□□□□ -1.34
UBE3B-208ENST00000538070 TRAV8-2A0A0B4J237 113 aa6.67□□□□□ -1.34
UBE3B-208ENST00000538070 IGKV3D-20A0A0C4DH25 116 aa6.67□□□□□ -1.34
UBE3B-208ENST00000538070 M0QZK8 103 aa6.67□□□□□ -1.34
UBE3B-208ENST00000538070 ANKRD39Q53RE8 183 aa6.67□□□□□ -1.34
UBE3B-208ENST00000538070 SLC25A34Q6PIV7 304 aa6.67□□□□□ -1.34
UBE3B-208ENST00000538070 NAA38Q9BRA0 125 aaKnown RBP6.67□□□□□ -1.34
UBE3B-208ENST00000538070 SLC50A1Q9BRV3 221 aa6.67□□□□□ -1.34
UBE3B-208ENST00000538070 GOLT1BQ9Y3E0 138 aa6.67□□□□□ -1.34
UBE3B-208ENST00000538070 CHD6Q8TD26 2715 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms