RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ZNF709Q8N972 641 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 OR56B1Q8NGI3 324 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 ZNF431Q8TF32 576 aaPredicted RBP3.37□□□□□ -1.87
CLIP1-207ENST00000536634 CYGBQ8WWM9 190 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 PHYHIPQ92561 330 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 LSM10Q969L4 123 aaKnown RBP3.37□□□□□ -1.87
CLIP1-207ENST00000536634 GINS3Q9BRX5 216 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 ZNF586Q9NXT0 402 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 AK6Q9Y3D8 172 aaKnown RBP3.37□□□□□ -1.87
CLIP1-207ENST00000536634 HLA-DRB4X5D2U9 266 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 C1orf196B1AJZ1 125 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 F5H768 121 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 APOC3P02656 99 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 NMBP08949 121 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 PTHLHP12272 177 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 NQO2P16083 231 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 HIST1H1DP16402 221 aaKnown RBP3.36□□□□□ -1.87
CLIP1-207ENST00000536634 CRYBB3P26998 211 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 RAB5CP51148 216 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 FGF8P55075 233 aaPredicted RBP3.36□□□□□ -1.87
CLIP1-207ENST00000536634 FABP9Q0Z7S8 132 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 SLAQ13239 276 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 DHRS2Q13268 280 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 TTC32Q5I0X7 151 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 PYY3Q5JQD4 70 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 TMEM69Q5SWH9 247 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 C10orf91Q5T1B1 145 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 UQCC3Q6UW78 93 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 SELENOHQ8IZQ5 122 aaKnown RBP3.36□□□□□ -1.87
CLIP1-207ENST00000536634 OR1L8Q8NGR8 309 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 OR1P1Q8NH06 330 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 MITD1Q8WV92 249 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 FAM3DQ96BQ1 224 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 SLC35B3Q9H1N7 401 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 CCL28Q9NRJ3 127 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 MRPL36Q9P0J6 103 aaKnown RBP3.36□□□□□ -1.87
CLIP1-207ENST00000536634 OR51B2Q9Y5P1 312 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 LPAP08519 4548 aa3.36□□□□□ -1.87
CLIP1-207ENST00000536634 FABP12A6NFH5 140 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 F8WDY8 70 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 RBFOX2O43251 390 aaKnown RBP eCLIP3.35□□□□□ -1.87
CLIP1-207ENST00000536634 GNG7O60262 68 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 HPRT1P00492 218 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 UCHL1P09936 223 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 RORCP51449 518 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 ST3GAL4Q11206 333 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 CLINT1Q14677 625 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 SSX1Q16384 188 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 PSG3Q16557 428 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 LGALSLQ3ZCW2 172 aaPredicted RBP3.35□□□□□ -1.87
CLIP1-207ENST00000536634 SPANXN2Q5MJ10 180 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 OR8G2PQ6IF36 304 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 SVBPQ8N300 66 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 C15orf54Q8N8G6 183 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 OR10R2Q8NGX6 335 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 OR51H1Q8NH63 302 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 RXFP4Q8TDU9 374 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 AP3S1Q92572 193 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 MRGPRFQ96AM1 343 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 PINX1Q96BK5 328 aaKnown RBP3.35□□□□□ -1.87
CLIP1-207ENST00000536634 METTL26Q96S19 204 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 UPK3BQ9BT76 320 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 TMEM231Q9H6L2 316 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 CARHSP1Q9Y2V2 147 aaKnown RBP3.35□□□□□ -1.87
CLIP1-207ENST00000536634 MUC2Q02817 5179 aa3.35□□□□□ -1.87
CLIP1-207ENST00000536634 A0A087WTM6 91 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 IRGMA1A4Y4 181 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 PLAC8L1A1L4L8 177 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 TMEM218A2RU14 115 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 C7orf66A4D0T2 115 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 COLCA2A8K830 154 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 TEX46H3BTG2 121 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 M0R143 59 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 TMEM50AO95807 157 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 CFDP00746 253 aaPredicted RBP3.34□□□□□ -1.87
CLIP1-207ENST00000536634 IFNA5P01569 189 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 HBE1P02100 147 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 RD3LP0DJH9 198 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 DEFB130BP0DP73 79 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 DEFB130AP0DP74 79 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 ANXA3P12429 323 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 NPPCP23582 126 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 GNRHRP30968 328 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 UBE2G2P60604 165 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 NCS1P62166 190 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 SELENOTP62341 195 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 GUK1Q16774 197 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 ESRGQ1W209 222 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 RRN3P1Q2M238 152 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 LAIR2Q6ISS4 152 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 TMEM91Q6ZNR0 172 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 ZNF818PQ6ZRF7 136 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 HSD17B11Q8NBQ5 300 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 SMIM12Q96EX1 92 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 MARVELD1Q9BSK0 173 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 COMMD9Q9P000 198 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 RAB22AQ9UL26 194 aa3.34□□□□□ -1.87
CLIP1-207ENST00000536634 TMEM235A6NFC5 223 aa3.33□□□□□ -1.88
CLIP1-207ENST00000536634 ZNF705GA8MUZ8 300 aaPredicted RBP3.33□□□□□ -1.88
CLIP1-207ENST00000536634 F6UB75 175 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms