RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 IFI27L1Q96BM0 104 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 COL6A6A6NMZ7 2263 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 A0A1B0GW15 77 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 TMEM95Q3KNT9 176 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 WFDC3Q8IUB2 231 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 AAMDCQ9H7C9 122 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 CYSLTR1Q9Y271 337 aa13.99□□□□□ -0.17
RAB40C-203ENST00000535977 TRAV8-1A0A0A6YYK1 113 aa13.98□□□□□ -0.17
RAB40C-203ENST00000535977 RIGQ13278 110 aa13.98□□□□□ -0.17
RAB40C-203ENST00000535977 CEND1Q8N111 149 aa13.98□□□□□ -0.17
RAB40C-203ENST00000535977 C21orf62Q9NYP8 219 aa13.98□□□□□ -0.17
RAB40C-203ENST00000535977 PPIFP30405 207 aaKnown RBP13.98□□□□□ -0.17
RAB40C-203ENST00000535977 Q6AWC8 147 aa13.98□□□□□ -0.17
RAB40C-203ENST00000535977 TM2D2Q9BX73 214 aa13.98□□□□□ -0.17
RAB40C-203ENST00000535977 ERG28Q9UKR5 140 aa13.98□□□□□ -0.17
RAB40C-203ENST00000535977 A0A1B0GWB2 263 aa13.97□□□□□ -0.17
RAB40C-203ENST00000535977 NCBP2LA6PVI3 153 aaKnown RBP13.97□□□□□ -0.17
RAB40C-203ENST00000535977 HBDP02042 147 aa13.97□□□□□ -0.17
RAB40C-203ENST00000535977 CT45A10P0DMU9 189 aa13.97□□□□□ -0.17
RAB40C-203ENST00000535977 D6R8Y8 96 aa13.97□□□□□ -0.17
RAB40C-203ENST00000535977 APOMO95445 188 aa13.97□□□□□ -0.17
RAB40C-203ENST00000535977 SHISA2Q6UWI4 295 aa13.97□□□□□ -0.17
RAB40C-203ENST00000535977 CHD6Q8TD26 2715 aa13.96□□□□□ -0.17
RAB40C-203ENST00000535977 TRBV25-1A0A075B6N4 114 aa13.96□□□□□ -0.18
RAB40C-203ENST00000535977 NDUFS7O75251 213 aa13.96□□□□□ -0.18
RAB40C-203ENST00000535977 GATD1Q8NB37 220 aa13.96□□□□□ -0.18
RAB40C-203ENST00000535977 RPL7P18124 248 aaKnown RBP13.95□□□□□ -0.18
RAB40C-203ENST00000535977 KLF17Q5JT82 389 aaPredicted RBP13.95□□□□□ -0.18
RAB40C-203ENST00000535977 TPPP3Q9BW30 176 aa13.95□□□□□ -0.18
RAB40C-203ENST00000535977 FOXI1Q12951 378 aa13.95□□□□□ -0.18
RAB40C-203ENST00000535977 C17orf77Q96MU5 243 aa13.95□□□□□ -0.18
RAB40C-203ENST00000535977 ADGRG4Q8IZF6 3080 aa13.95□□□□□ -0.18
RAB40C-203ENST00000535977 SIRPDQ9H106 197 aa13.94□□□□□ -0.18
RAB40C-203ENST00000535977 ABCA4P78363 2273 aa13.94□□□□□ -0.18
RAB40C-203ENST00000535977 XGP55808 180 aa13.94□□□□□ -0.18
RAB40C-203ENST00000535977 PAX8Q06710 450 aa13.94□□□□□ -0.18
RAB40C-203ENST00000535977 FHL3Q13643 280 aa13.94□□□□□ -0.18
RAB40C-203ENST00000535977 C12orf74Q32Q52 190 aa13.94□□□□□ -0.18
RAB40C-203ENST00000535977 PRELID3AQ96N28 172 aa13.94□□□□□ -0.18
RAB40C-203ENST00000535977 ABCA1O95477 2261 aa13.94□□□□□ -0.18
RAB40C-203ENST00000535977 TMEM8BA6NDV4 472 aa13.93□□□□□ -0.18
RAB40C-203ENST00000535977 ZNF785A8K8V0 405 aa13.93□□□□□ -0.18
RAB40C-203ENST00000535977 F8W735 103 aaPredicted RBP13.93□□□□□ -0.18
RAB40C-203ENST00000535977 UBE2E1P51965 193 aa13.93□□□□□ -0.18
RAB40C-203ENST00000535977 Q6ZUT4 128 aa13.93□□□□□ -0.18
RAB40C-203ENST00000535977 PIFOQ8TCI5 191 aa13.93□□□□□ -0.18
RAB40C-203ENST00000535977 ZFP36P26651 326 aaKnown RBP13.92□□□□□ -0.18
RAB40C-203ENST00000535977 KLK9Q2XQG4 91 aa13.92□□□□□ -0.18
RAB40C-203ENST00000535977 DYNAPQ8N1N2 210 aa13.92□□□□□ -0.18
RAB40C-203ENST00000535977 KLK9Q9UKQ9 250 aa13.92□□□□□ -0.18
RAB40C-203ENST00000535977 HHLA3Q9XRX5 114 aa13.92□□□□□ -0.18
RAB40C-203ENST00000535977 EFNA4P52798 201 aa13.92□□□□□ -0.18
RAB40C-203ENST00000535977 NDPQ00604 133 aa13.92□□□□□ -0.18
RAB40C-203ENST00000535977 COX8CQ7Z4L0 72 aa13.92□□□□□ -0.18
RAB40C-203ENST00000535977 ASCL2Q99929 193 aa13.92□□□□□ -0.18
RAB40C-203ENST00000535977 CFAP46Q8IYW2 2715 aa13.92□□□□□ -0.18
RAB40C-203ENST00000535977 C1QTNF4Q9BXJ3 329 aa13.92□□□□□ -0.18
RAB40C-203ENST00000535977 IGHV7-81A0A0B4J1V7 117 aa13.91□□□□□ -0.18
RAB40C-203ENST00000535977 LY6DQ14210 128 aa13.91□□□□□ -0.18
RAB40C-203ENST00000535977 GLMPQ8WWB7 406 aa13.91□□□□□ -0.18
RAB40C-203ENST00000535977 AMN1Q8IY45 258 aa13.91□□□□□ -0.18
RAB40C-203ENST00000535977 Q8N9W7 124 aa13.91□□□□□ -0.18
RAB40C-203ENST00000535977 EGR2P11161 476 aaPredicted RBP13.9□□□□□ -0.18
RAB40C-203ENST00000535977 RRN3P1Q2M238 152 aa13.9□□□□□ -0.18
RAB40C-203ENST00000535977 GTSCR1Q86UQ5 136 aa13.9□□□□□ -0.18
RAB40C-203ENST00000535977 NFE4Q86UQ8 179 aa13.9□□□□□ -0.18
RAB40C-203ENST00000535977 ANAPC13Q9BS18 74 aa13.9□□□□□ -0.18
RAB40C-203ENST00000535977 U3KQK5 164 aa13.9□□□□□ -0.18
RAB40C-203ENST00000535977 GAGE5Q13069 117 aa13.9□□□□□ -0.18
RAB40C-203ENST00000535977 GAGE6Q13070 117 aa13.9□□□□□ -0.18
RAB40C-203ENST00000535977 FAM110DQ8TAY7 271 aaPredicted RBP13.9□□□□□ -0.18
RAB40C-203ENST00000535977 S4R3C0 116 aa13.9□□□□□ -0.18
RAB40C-203ENST00000535977 ARHGAP32A7KAX9 2087 aa13.89□□□□□ -0.19
RAB40C-203ENST00000535977 CTSGP08311 255 aa13.89□□□□□ -0.19
RAB40C-203ENST00000535977 ZNF493Q6ZR52 646 aa13.89□□□□□ -0.19
RAB40C-203ENST00000535977 ORMDL3Q8N138 153 aa13.89□□□□□ -0.19
RAB40C-203ENST00000535977 TMEM213A2RRL7 107 aa13.89□□□□□ -0.19
RAB40C-203ENST00000535977 B5MCH6 92 aa13.89□□□□□ -0.19
RAB40C-203ENST00000535977 PRB4P10163 310 aaPredicted RBP13.89□□□□□ -0.19
RAB40C-203ENST00000535977 PRORYQ9H606 182 aa13.89□□□□□ -0.19
RAB40C-203ENST00000535977 SRSF1Q07955 248 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAB40C-203ENST00000535977 ODF1Q14990 250 aa13.88□□□□□ -0.19
RAB40C-203ENST00000535977 ZMAT4Q9H898 229 aa13.88□□□□□ -0.19
RAB40C-203ENST00000535977 M0R3E3 92 aa13.88□□□□□ -0.19
RAB40C-203ENST00000535977 SMCPP49901 116 aaPredicted RBP13.88□□□□□ -0.19
RAB40C-203ENST00000535977 CRIP1P50238 77 aa13.88□□□□□ -0.19
RAB40C-203ENST00000535977 COL12A1Q99715 3063 aa13.88□□□□□ -0.19
RAB40C-203ENST00000535977 SMKR1H3BMG3 65 aa13.87□□□□□ -0.19
RAB40C-203ENST00000535977 FAM104BQ5XKR9 115 aa13.87□□□□□ -0.19
RAB40C-203ENST00000535977 HERV-K104P63124 156 aa13.87□□□□□ -0.19
RAB40C-203ENST00000535977 MRPL51Q4U2R6 128 aaKnown RBP13.86□□□□□ -0.19
RAB40C-203ENST00000535977 MAPKAPK5-AS1Q8N8E1 139 aa13.86□□□□□ -0.19
RAB40C-203ENST00000535977 ATP6V0E2Q8NHE4 81 aa13.86□□□□□ -0.19
RAB40C-203ENST00000535977 UBTD1Q9HAC8 227 aa13.86□□□□□ -0.19
RAB40C-203ENST00000535977 UFC1Q9Y3C8 167 aa13.86□□□□□ -0.19
RAB40C-203ENST00000535977 AGRNO00468 2067 aa13.86□□□□□ -0.19
RAB40C-203ENST00000535977 NPYP01303 97 aa13.86□□□□□ -0.19
RAB40C-203ENST00000535977 IGKCP01834 107 aa13.86□□□□□ -0.19
RAB40C-203ENST00000535977 LCNL1Q6ZST4 164 aa13.86□□□□□ -0.19
RAB40C-203ENST00000535977 TRBV7-9A0A0J9YWB2 115 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms