RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 OR11H2Q8NH07 326 aa15.06■□□□□ 0
CAPN1-226ENST00000533820 COL12A1Q99715 3063 aa15.06■□□□□ 0
CAPN1-226ENST00000533820 EVI2AP22794 236 aa15.06■□□□□ 0
CAPN1-226ENST00000533820 NMUP48645 174 aa15.06■□□□□ 0
CAPN1-226ENST00000533820 TCF15Q12870 199 aa15.06■□□□□ 0
CAPN1-226ENST00000533820 PRR25Q96S07 402 aa15.06■□□□□ 0
CAPN1-226ENST00000533820 MT-ATP8P03928 68 aa15.05■□□□□ 0
CAPN1-226ENST00000533820 IGLV11-55A0A075B6I3 123 aa15.05■□□□□ -0
CAPN1-226ENST00000533820 ID1P41134 155 aa15.05■□□□□ -0
CAPN1-226ENST00000533820 RNF182Q8N6D2 247 aa15.05■□□□□ -0
CAPN1-226ENST00000533820 ZNF418Q8TF45 676 aaPredicted RBP15.05■□□□□ -0
CAPN1-226ENST00000533820 UFC1Q9Y3C8 167 aa15.05■□□□□ -0
CAPN1-226ENST00000533820 NCOR2Q9Y618 2525 aa15.05■□□□□ -0
CAPN1-226ENST00000533820 RAB1BQ9H0U4 201 aa15.04■□□□□ -0
CAPN1-226ENST00000533820 RNF5Q99942 180 aa15.04■□□□□ -0
CAPN1-226ENST00000533820 TRBV6-1A0A0K0K1D8 114 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 FOXI2Q6ZQN5 318 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 ANAPC13Q9BS18 74 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 GATA1P15976 413 aaPredicted RBP15.03■□□□□ -0
CAPN1-226ENST00000533820 Q6AWC8 147 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 AMTNQ6UX39 209 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 C8orf86Q6ZUL3 223 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 PCP2Q8IVA1 136 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 DKK2Q9UBU2 259 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 PRAC2D3DTV9 90 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 ECSCRQ19T08 205 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 SMAD5-AS1Q9Y6J3 95 aa15.03■□□□□ -0
CAPN1-226ENST00000533820 CHD8Q9HCK8 2581 aa15.02■□□□□ -0
CAPN1-226ENST00000533820 H3BMG7 143 aa15.02■□□□□ -0
CAPN1-226ENST00000533820 CCL21O00585 134 aa15.02■□□□□ -0
CAPN1-226ENST00000533820 GCSHP23434 173 aa15.02■□□□□ -0
CAPN1-226ENST00000533820 CITED1Q99966 193 aa15.02■□□□□ -0
CAPN1-226ENST00000533820 TTTY13Q9BZ97 58 aa15.02■□□□□ -0
CAPN1-226ENST00000533820 A1L4Q6 167 aa15.02□□□□□ -0.01
CAPN1-226ENST00000533820 J3KRW8 73 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 CTSGP08311 255 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 RPL7P18124 248 aaKnown RBP15.01□□□□□ -0.01
CAPN1-226ENST00000533820 ZNF493Q6ZR52 646 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 IFI27L1Q96BM0 104 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 VKORC1Q9BQB6 163 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 HBDP02042 147 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 GAGE5Q13069 117 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 GAGE6Q13070 117 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 FAM110AQ9BQ89 295 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 ERG28Q9UKR5 140 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 NDUFA3O95167 84 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 FGF6P10767 208 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 ZNF562Q6V9R5 426 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 TIMD4Q96H15 378 aa15.01□□□□□ -0.01
CAPN1-226ENST00000533820 NDUFS7O75251 213 aa15□□□□□ -0.01
CAPN1-226ENST00000533820 SMIM13P0DJ93 91 aa15□□□□□ -0.01
CAPN1-226ENST00000533820 RPL32P62910 135 aaKnown RBP15□□□□□ -0.01
CAPN1-226ENST00000533820 SYT8Q8NBV8 401 aa15□□□□□ -0.01
CAPN1-226ENST00000533820 LY6G5BQ8NDX9 201 aa15□□□□□ -0.01
CAPN1-226ENST00000533820 OR11H6Q8NGC7 330 aa15□□□□□ -0.01
CAPN1-226ENST00000533820 SPTBN4Q9H254 2564 aa15□□□□□ -0.01
CAPN1-226ENST00000533820 PDE6HQ13956 83 aa15□□□□□ -0.01
CAPN1-226ENST00000533820 VMO1Q7Z5L0 202 aa15□□□□□ -0.01
CAPN1-226ENST00000533820 NPBQ8NG41 125 aa15□□□□□ -0.01
CAPN1-226ENST00000533820 IGHG4P01861 327 aa14.99□□□□□ -0.01
CAPN1-226ENST00000533820 SPG11Q96JI7 2443 aa14.99□□□□□ -0.01
CAPN1-226ENST00000533820 ZFHX3Q15911 3703 aa14.98□□□□□ -0.01
CAPN1-226ENST00000533820 GATD1Q8NB37 220 aa14.98□□□□□ -0.01
CAPN1-226ENST00000533820 PRTN3P24158 256 aa14.97□□□□□ -0.01
CAPN1-226ENST00000533820 C15orf32Q32M92 178 aa14.97□□□□□ -0.01
CAPN1-226ENST00000533820 Q6ZQT7 251 aa14.97□□□□□ -0.01
CAPN1-226ENST00000533820 IL17RELQ6ZVW7 336 aa14.97□□□□□ -0.01
CAPN1-226ENST00000533820 HIVEP3Q5T1R4 2406 aa14.97□□□□□ -0.01
CAPN1-226ENST00000533820 FXYD2P54710 66 aa14.97□□□□□ -0.01
CAPN1-226ENST00000533820 ARL3P36405 182 aa14.96□□□□□ -0.01
CAPN1-226ENST00000533820 LEPP41159 167 aa14.96□□□□□ -0.01
CAPN1-226ENST00000533820 ZFP36P26651 326 aaKnown RBP14.96□□□□□ -0.01
CAPN1-226ENST00000533820 CYSLTR1Q9Y271 337 aa14.96□□□□□ -0.01
CAPN1-226ENST00000533820 U3KQK5 164 aa14.96□□□□□ -0.01
CAPN1-226ENST00000533820 PRSS1P07477 247 aa14.96□□□□□ -0.02
CAPN1-226ENST00000533820 ZNF575Q86XF7 245 aa14.96□□□□□ -0.02
CAPN1-226ENST00000533820 C1QTNF4Q9BXJ3 329 aa14.96□□□□□ -0.02
CAPN1-226ENST00000533820 IGHV7-81A0A0B4J1V7 117 aa14.95□□□□□ -0.02
CAPN1-226ENST00000533820 LGALS9BQ3B8N2 356 aa14.95□□□□□ -0.02
CAPN1-226ENST00000533820 LGALS9CQ6DKI2 356 aa14.95□□□□□ -0.02
CAPN1-226ENST00000533820 TTC9CQ8N5M4 171 aa14.95□□□□□ -0.02
CAPN1-226ENST00000533820 G3V318 75 aa14.95□□□□□ -0.02
CAPN1-226ENST00000533820 SPRY2O43597 315 aa14.95□□□□□ -0.02
CAPN1-226ENST00000533820 LINC01548A6NM66 108 aa14.94□□□□□ -0.02
CAPN1-226ENST00000533820 ODF3BA8MYP8 253 aa14.94□□□□□ -0.02
CAPN1-226ENST00000533820 SMAD7O15105 426 aaKnown RBP14.94□□□□□ -0.02
CAPN1-226ENST00000533820 SCGB2A1O75556 95 aa14.94□□□□□ -0.02
CAPN1-226ENST00000533820 XGP55808 180 aa14.94□□□□□ -0.02
CAPN1-226ENST00000533820 GLMPQ8WWB7 406 aa14.94□□□□□ -0.02
CAPN1-226ENST00000533820 NHP2Q9NX24 153 aaKnown RBP14.94□□□□□ -0.02
CAPN1-226ENST00000533820 TRAV26-2A0A0B4J265 109 aa14.94□□□□□ -0.02
CAPN1-226ENST00000533820 A0A1B0GWB2 263 aa14.94□□□□□ -0.02
CAPN1-226ENST00000533820 CLEC19AQ6UXS0 136 aa14.94□□□□□ -0.02
CAPN1-226ENST00000533820 RNF185Q96GF1 192 aa14.94□□□□□ -0.02
CAPN1-226ENST00000533820 CDIP1Q9H305 208 aa14.94□□□□□ -0.02
CAPN1-226ENST00000533820 F8W1H4 67 aa14.93□□□□□ -0.02
CAPN1-226ENST00000533820 IGLC6P0CF74 106 aa14.93□□□□□ -0.02
CAPN1-226ENST00000533820 MAP1LC3AQ9H492 121 aa14.93□□□□□ -0.02
CAPN1-226ENST00000533820 LINC00527Q9UJ94 153 aa14.93□□□□□ -0.02
CAPN1-226ENST00000533820 IGKV2D-26A0A0A0MRZ7 120 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms