RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 NUPR1O60356 82 aa13.95□□□□□ -0.18
SMPD1-208ENST00000533123 SCGB1D1O95968 90 aa13.95□□□□□ -0.18
SMPD1-208ENST00000533123 LCN12Q6JVE5 192 aa13.95□□□□□ -0.18
SMPD1-208ENST00000533123 KIR2DL5BA0A0G2JN68 375 aa13.95□□□□□ -0.18
SMPD1-208ENST00000533123 KIR2DL5BA0A0G2JPC4 375 aa13.95□□□□□ -0.18
SMPD1-208ENST00000533123 PRAC2D3DTV9 90 aa13.95□□□□□ -0.18
SMPD1-208ENST00000533123 KIR2DL5AQ8N109 375 aa13.95□□□□□ -0.18
SMPD1-208ENST00000533123 GRAMD2BQ96HH9 432 aa13.95□□□□□ -0.18
SMPD1-208ENST00000533123 NOTCH3Q9UM47 2321 aa13.95□□□□□ -0.18
SMPD1-208ENST00000533123 CSN3P07498 182 aa13.94□□□□□ -0.18
SMPD1-208ENST00000533123 ZC2HC1AQ96GY0 325 aa13.94□□□□□ -0.18
SMPD1-208ENST00000533123 BTF3L4Q96K17 158 aa13.94□□□□□ -0.18
SMPD1-208ENST00000533123 VGLL1Q99990 258 aa13.94□□□□□ -0.18
SMPD1-208ENST00000533123 SLC50A1Q9BRV3 221 aa13.94□□□□□ -0.18
SMPD1-208ENST00000533123 Q8TAT8 98 aa13.94□□□□□ -0.18
SMPD1-208ENST00000533123 C8orf49Q96NF6 230 aa13.94□□□□□ -0.18
SMPD1-208ENST00000533123 NAGKQ9UJ70 344 aa13.94□□□□□ -0.18
SMPD1-208ENST00000533123 SPINK4O60575 86 aa13.93□□□□□ -0.18
SMPD1-208ENST00000533123 FRMD6-AS1P0C7T7 363 aa13.93□□□□□ -0.18
SMPD1-208ENST00000533123 IGKV3-7A0A075B6H7 116 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 SMIM27A0A1W2PRY6 76 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 C19orf71A6NCJ1 209 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 M0R143 59 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 RPL11P62913 178 aaKnown RBP13.92□□□□□ -0.18
SMPD1-208ENST00000533123 SHISA2Q6UWI4 295 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 LINC00482Q8N8I6 264 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 MDFIQ99750 246 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 ZFP30Q9Y2G7 519 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 SERTM2A0A1B0GWG4 89 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 M0QZ24 198 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 RAB4AP20338 218 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 ZNF492Q9P255 531 aa13.92□□□□□ -0.18
SMPD1-208ENST00000533123 ERCC8Q13216 396 aa13.91□□□□□ -0.18
SMPD1-208ENST00000533123 SPATA3Q8NHX4 192 aa13.91□□□□□ -0.18
SMPD1-208ENST00000533123 BMI1P35226 326 aa13.91□□□□□ -0.18
SMPD1-208ENST00000533123 TCF24Q7RTU0 167 aa13.91□□□□□ -0.18
SMPD1-208ENST00000533123 ARL6IP6Q8N6S5 226 aa13.91□□□□□ -0.18
SMPD1-208ENST00000533123 C16orf92Q96LL3 132 aa13.91□□□□□ -0.18
SMPD1-208ENST00000533123 C20orf173Q96LM9 149 aa13.91□□□□□ -0.18
SMPD1-208ENST00000533123 RPP21Q9H633 154 aaKnown RBP13.91□□□□□ -0.18
SMPD1-208ENST00000533123 P01737 135 aa13.9□□□□□ -0.18
SMPD1-208ENST00000533123 CRIP1P50238 77 aa13.9□□□□□ -0.18
SMPD1-208ENST00000533123 DAZAP1Q96EP5 407 aaKnown RBP13.9□□□□□ -0.18
SMPD1-208ENST00000533123 TRAV9-1A0A075B6T8 112 aa13.89□□□□□ -0.19
SMPD1-208ENST00000533123 SOCS3O14543 225 aa13.89□□□□□ -0.19
SMPD1-208ENST00000533123 DYNLRB2Q8TF09 96 aa13.89□□□□□ -0.19
SMPD1-208ENST00000533123 TP53TG3Q9ULZ0 132 aa13.89□□□□□ -0.19
SMPD1-208ENST00000533123 SAP30O75446 220 aa13.88□□□□□ -0.19
SMPD1-208ENST00000533123 G0S2P27469 103 aa13.88□□□□□ -0.19
SMPD1-208ENST00000533123 TSKUQ8WUA8 353 aa13.88□□□□□ -0.19
SMPD1-208ENST00000533123 PRR25Q96S07 402 aa13.88□□□□□ -0.19
SMPD1-208ENST00000533123 SORL1Q92673 2214 aa13.88□□□□□ -0.19
SMPD1-208ENST00000533123 GRIFINA4D1Z8 144 aa13.88□□□□□ -0.19
SMPD1-208ENST00000533123 NRN1Q9NPD7 142 aa13.88□□□□□ -0.19
SMPD1-208ENST00000533123 ZNF705DP0CH99 300 aaPredicted RBP13.87□□□□□ -0.19
SMPD1-208ENST00000533123 ZNF705BP0CI00 300 aaPredicted RBP13.87□□□□□ -0.19
SMPD1-208ENST00000533123 CD33P20138 364 aa13.87□□□□□ -0.19
SMPD1-208ENST00000533123 LINC00310P59036 64 aa13.87□□□□□ -0.19
SMPD1-208ENST00000533123 MRPL54Q6P161 138 aaKnown RBP13.87□□□□□ -0.19
SMPD1-208ENST00000533123 NPIPB6E9PJ23 425 aa13.87□□□□□ -0.19
SMPD1-208ENST00000533123 RPL19P84098 196 aaKnown RBP13.87□□□□□ -0.19
SMPD1-208ENST00000533123 DEFB114Q30KQ6 69 aa13.87□□□□□ -0.19
SMPD1-208ENST00000533123 Q6ZWC4 215 aa13.87□□□□□ -0.19
SMPD1-208ENST00000533123 NUP35Q8NFH5 326 aa13.87□□□□□ -0.19
SMPD1-208ENST00000533123 SIGLEC8Q9NYZ4 499 aa13.87□□□□□ -0.19
SMPD1-208ENST00000533123 HIGD1CA8MV81 97 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 CD300EQ496F6 205 aaPredicted RBP13.86□□□□□ -0.19
SMPD1-208ENST00000533123 GTSF1Q8WW33 167 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 MRPL53Q96EL3 112 aaKnown RBP13.86□□□□□ -0.19
SMPD1-208ENST00000533123 IZUMO1RA6ND01 250 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 TFPI2P48307 235 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 DEFB1P60022 68 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 WFDC3Q8IUB2 231 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 TMEM61Q8N0U2 210 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 ZNF738Q8NE65 137 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 OR2D3Q8NGH3 330 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 MS4A6AQ9H2W1 248 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 ANK2Q01484 3957 aa13.86□□□□□ -0.19
SMPD1-208ENST00000533123 PKD1L1Q8TDX9 2849 aa13.85□□□□□ -0.19
SMPD1-208ENST00000533123 CT45A10P0DMU9 189 aa13.85□□□□□ -0.19
SMPD1-208ENST00000533123 ESDP10768 282 aa13.85□□□□□ -0.19
SMPD1-208ENST00000533123 BTF3P20290 206 aaKnown RBP13.85□□□□□ -0.19
SMPD1-208ENST00000533123 TDRG1Q3Y452 100 aa13.85□□□□□ -0.19
SMPD1-208ENST00000533123 SAPCD1Q5SSQ6 148 aa13.85□□□□□ -0.19
SMPD1-208ENST00000533123 AGPAT4-IT1Q9H0P7 198 aa13.85□□□□□ -0.19
SMPD1-208ENST00000533123 NAT8BQ9UHF3 227 aa13.85□□□□□ -0.19
SMPD1-208ENST00000533123 RBAKDNA6NC62 111 aa13.84□□□□□ -0.19
SMPD1-208ENST00000533123 ZNF80P51504 273 aaPredicted RBP13.84□□□□□ -0.19
SMPD1-208ENST00000533123 PAFAH1B2P68402 229 aa13.84□□□□□ -0.19
SMPD1-208ENST00000533123 CT83Q5H943 113 aa13.84□□□□□ -0.19
SMPD1-208ENST00000533123 TEX43Q6ZNM6 134 aa13.84□□□□□ -0.19
SMPD1-208ENST00000533123 RBPMS2Q6ZRY4 209 aaKnown RBP13.84□□□□□ -0.19
SMPD1-208ENST00000533123 FBLL1A6NHQ2 334 aaKnown RBP13.84□□□□□ -0.19
SMPD1-208ENST00000533123 ZNF25P17030 456 aaPredicted RBP13.84□□□□□ -0.19
SMPD1-208ENST00000533123 ZNF705AQ6ZN79 300 aaPredicted RBP13.84□□□□□ -0.19
SMPD1-208ENST00000533123 C20orf144Q9BQM9 153 aa13.84□□□□□ -0.19
SMPD1-208ENST00000533123 A8MWL6 223 aa13.83□□□□□ -0.2
SMPD1-208ENST00000533123 SH2D1AO60880 128 aa13.83□□□□□ -0.2
SMPD1-208ENST00000533123 MRPL52Q86TS9 123 aaKnown RBP13.83□□□□□ -0.2
SMPD1-208ENST00000533123 DCANP1Q8TF63 244 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms