RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540		G3V318	75 aa		11.25	□□□□□ -0.61
NR1H3-231	ENST00000529540	CFHR3	Q02985	330 aa		11.25	□□□□□ -0.61
NR1H3-231	ENST00000529540		Q6AWC8	147 aa		11.25	□□□□□ -0.61
NR1H3-231	ENST00000529540	RNF24	Q9Y225	148 aa		11.25	□□□□□ -0.61
NR1H3-231	ENST00000529540	IGLV11-55	A0A075B6I3	123 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	FAM223B	A6NKX1	122 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	IGHG4	P01861	327 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	ELANE	P08246	267 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	IGLC1	P0CG04	106 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	COX8A	P10176	69 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	FAM223A	Q8IWN6	122 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	ARL6IP6	Q8N6S5	226 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	MUC21	A0A0G2JKD1	596 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540		A0A0G2JLM5	398 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	MUC21	A0A140T8X8	626 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	ZNF785	A8K8V0	405 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	IGLV1-40	P01703	118 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	PRR31	Q5SQ13	230 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	MUC21	Q5SSG8	566 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	LYPD1	Q8N2G4	141 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	USMG5	Q96IX5	58 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	TP73-AS1	Q9UF72	201 aa		11.24	□□□□□ -0.61
NR1H3-231	ENST00000529540	ZFHX3	Q15911	3703 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	SCGB2A1	O75556	95 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	GPR183	P32249	361 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	FOXE3	Q13461	319 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	TMEM95	Q3KNT9	176 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	GOLT1A	Q6ZVE7	132 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	PRNT	Q86SH4	94 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	OR4X2	Q8NGF9	303 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	LINC01006	Q8NI28	216 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	ATP6V0B	Q99437	205 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	ZNF747	Q9BV97	191 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	LINC00527	Q9UJ94	153 aa		11.23	□□□□□ -0.61
NR1H3-231	ENST00000529540	PLXNB1	O43157	2135 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	CLPSL1	A2RUU4	121 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540		H3BTX0	84 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540		I3L2K1	104 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	PSG1	P11464	419 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	CSN1S1	P47710	185 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	LYZ	P61626	148 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	COTL1	Q14019	142 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	ZNF493	Q6ZR52	646 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	C2orf91	Q6ZV80	131 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	OR10AG1	Q8NH19	301 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	FANCD2OS	Q96PS1	177 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	AP5S1	Q9NUS5	200 aa		11.22	□□□□□ -0.61
NR1H3-231	ENST00000529540	TRBV19	A0A075B6N1	114 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	TRAV8-1	A0A0A6YYK1	113 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	OR2T8	A6NH00	312 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540		H3BRN7	92 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	TRGV3	P03979	118 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	PF4V1	P10720	104 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	PSMB8	P28062	276 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	SEC11A	P67812	179 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	FA2H	Q7L5A8	372 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	RNF152	Q8N8N0	203 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	ZC2HC1A	Q96GY0	325 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	SHANK2-AS3	Q9BTD1	123 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540	PEF1	Q9UBV8	284 aa	Known RBP	11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540		U3KQK5	164 aa		11.21	□□□□□ -0.61
NR1H3-231	ENST00000529540		K7EQM0	130 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	ARMS2	P0C7Q2	107 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	ZNF138	P52744	262 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	EXOC3-AS1	Q8N2X6	119 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	OR1N2	Q8NGR9	330 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	WFDC12	Q8WWY7	111 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	CST9L	Q9H4G1	147 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	TRBV7-1	A0A0A6YYK4	115 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	RAB9A	P51151	201 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	ATP5G2	Q06055	141 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	C15orf32	Q32M92	178 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	SIGLEC15	Q6ZMC9	328 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	BPIFA4P	Q86YQ2	179 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	EEF1AKMT3	Q96AZ1	226 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540	PSG8	Q9UQ74	426 aa		11.2	□□□□□ -0.62
NR1H3-231	ENST00000529540		A0A087X0K7	114 aa		11.19	□□□□□ -0.62
NR1H3-231	ENST00000529540	IGHV3-21	A0A0B4J1V1	117 aa		11.19	□□□□□ -0.62
NR1H3-231	ENST00000529540	CBY3	A6NI87	242 aa		11.19	□□□□□ -0.62
NR1H3-231	ENST00000529540	FCGR2B	P31994	310 aa	Predicted RBP	11.19	□□□□□ -0.62
NR1H3-231	ENST00000529540	PSG9	Q00887	426 aa		11.19	□□□□□ -0.62
NR1H3-231	ENST00000529540	PSG3	Q16557	428 aa		11.19	□□□□□ -0.62
NR1H3-231	ENST00000529540	OCIAD2	Q56VL3	154 aa		11.19	□□□□□ -0.62
NR1H3-231	ENST00000529540	AMMECR1L	Q6DCA0	310 aa		11.19	□□□□□ -0.62
NR1H3-231	ENST00000529540	C21orf62	Q9NYP8	219 aa		11.19	□□□□□ -0.62
NR1H3-231	ENST00000529540		K7EIM0	57 aa		11.18	□□□□□ -0.62
NR1H3-231	ENST00000529540	IGKV1-17	P01599	117 aa		11.18	□□□□□ -0.62
NR1H3-231	ENST00000529540	CSN3	P07498	182 aa		11.18	□□□□□ -0.62
NR1H3-231	ENST00000529540	FGF6	P10767	208 aa		11.18	□□□□□ -0.62
NR1H3-231	ENST00000529540	MFAP4	P55083	255 aa		11.18	□□□□□ -0.62
NR1H3-231	ENST00000529540	LGALS9B	Q3B8N2	356 aa		11.18	□□□□□ -0.62
NR1H3-231	ENST00000529540	LGALS9C	Q6DKI2	356 aa		11.18	□□□□□ -0.62
NR1H3-231	ENST00000529540	MRPS12	O15235	138 aa	Known RBP	11.17	□□□□□ -0.62
NR1H3-231	ENST00000529540	TMEM97	Q5BJF2	176 aa		11.17	□□□□□ -0.62
NR1H3-231	ENST00000529540	PRSS3P2	Q8NHM4	247 aa		11.17	□□□□□ -0.62
NR1H3-231	ENST00000529540	UBE2E2	Q96LR5	201 aa		11.17	□□□□□ -0.62
NR1H3-231	ENST00000529540		A0A096LNJ9	63 aa		11.17	□□□□□ -0.62
NR1H3-231	ENST00000529540	SERTM2	A0A1B0GWG4	89 aa		11.17	□□□□□ -0.62
NR1H3-231	ENST00000529540	NCR2	O95944	276 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms