RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 LOC107984640A0A0U1RRK4 108 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 DPRXA6NFQ7 191 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 FAM24AA6NFZ4 105 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 M0R2P5 195 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 SSSCA1O60232 199 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 LYZL6O75951 148 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 APOMO95445 188 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 PTHP01270 115 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 TRACP01848 142 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 PYYP10082 97 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 CRYGAP11844 174 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 TAS2R45P59539 299 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 HBG1P69891 147 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 HBG2P69892 147 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 SSBP1Q04837 148 aaKnown RBP2.06□□□□□ -2.08
CTR9-204ENST00000529355 DIAPH2-AS1Q14236 149 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 ZNF141Q15928 474 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 FKBP1CQ5VVH2 108 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 Q5XG85 94 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 TMEM91Q6ZNR0 172 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 Q6ZRU5 148 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 AAED1Q7RTV5 226 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 TRAPPC6BQ86SZ2 158 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 LINC00471Q8N535 108 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 OR5H2Q8NGV7 314 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 SMIM4Q8WVI0 70 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 BORCS8Q96FH0 119 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 COMMD5Q9GZQ3 224 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 TVP23BQ9NYZ1 205 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 ABRACLQ9P1F3 81 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 HES2Q9Y543 173 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 THADAQ6YHU6 1953 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 CACNA1DQ01668 2161 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 SCN7AQ01118 1682 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 LMO7Q8WWI1 1683 aa2.06□□□□□ -2.08
CTR9-204ENST00000529355 COL5A3P25940 1745 aaPredicted RBP2.05□□□□□ -2.08
CTR9-204ENST00000529355 KIAA1671Q9BY89 1806 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 RALGAPA2Q2PPJ7 1873 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 ANKRD36A6QL64 1941 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 BAZ2BQ9UIF8 2168 aaKnown RBP2.05□□□□□ -2.08
CTR9-204ENST00000529355 SVILO95425 2214 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 TRAV12-2A0A075B6T6 113 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 TRAV27A0A087WT01 109 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 TRAV14DV4A0A0A6YYC5 116 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 TRAV13-1A0A0B4J241 112 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 TRAV8-4A0A0B4J246 113 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 TRAV4A0A0B4J268 109 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 MUC21A0A0G2JKD1 596 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 MUC21A0A140T8X8 626 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 LY6LH3BQJ8 138 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 SYS1-DBNDD2H3BUS1 97 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 H3BUT2 72 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 FGF6P10767 208 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 FOXA3P55318 350 aaPredicted RBP2.05□□□□□ -2.08
CTR9-204ENST00000529355 MTPNP58546 118 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 DAD1P61803 113 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 PPP1CAP62136 330 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 RTL8BQ17RB0 113 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 MPV17LQ2QL34 196 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 MRPL2Q5T653 305 aaKnown RBP2.05□□□□□ -2.08
CTR9-204ENST00000529355 LINC01545Q5VT33 79 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 RPS19BP1Q86WX3 136 aaKnown RBP2.05□□□□□ -2.08
CTR9-204ENST00000529355 BPIFA4PQ86YQ2 179 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 PRR15Q8IV56 129 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 MSRB3Q8IXL7 192 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 EXOC3-AS1Q8N2X6 119 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 C15orf53Q8NAA6 179 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 MRPL30Q8TCC3 161 aaKnown RBP2.05□□□□□ -2.08
CTR9-204ENST00000529355 RPS4Y2Q8TD47 263 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 DPH3Q96FX2 82 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 UBE2E2Q96LR5 201 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 PRELID3AQ96N28 172 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 NAA38Q9BRA0 125 aaKnown RBP2.05□□□□□ -2.08
CTR9-204ENST00000529355 CST11Q9H112 138 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 BCL2L10Q9HD36 194 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 KCPQ6ZWJ8 1503 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 LRRC37A3O60309 1634 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 LY75O60449 1722 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 LOC285556D6RIA3 1793 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 CPAMD8Q8IZJ3 1885 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 PLXNA1Q9UIW2 1896 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 EML6Q6ZMW3 1958 aa2.05□□□□□ -2.08
CTR9-204ENST00000529355 SNRNP200O75643 2136 aaKnown RBP2.05□□□□□ -2.08
CTR9-204ENST00000529355 TRAV8-2A0A0B4J237 113 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 TRBV7-6A0A0J9YX20 115 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 FAM236AA0A1B0GUQ0 79 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 FAM236BA0A1B0GV22 79 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 IZUMO1RA6ND01 250 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 A8MWV9 139 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 ZNF737O75373 536 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 NDUFB2O95178 105 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 RBP4P02753 201 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 SMIM13P0DJ93 91 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 COX7CP15954 63 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 CTLA4P16410 223 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 HLA-DMBP28068 263 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 C1QTNF8P60827 252 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 KRTDAPP60985 99 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 MRPS36P82909 103 aaKnown RBP2.04□□□□□ -2.08
CTR9-204ENST00000529355 FOXF1Q12946 379 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms