RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 C9JQL5 133 aa10.93□□□□□ -0.66
LRRK1-202ENST00000525284 NCR3O14931 201 aa10.93□□□□□ -0.66
LRRK1-202ENST00000525284 LY6HO94772 140 aa10.93□□□□□ -0.66
LRRK1-202ENST00000525284 CRYGSP22914 178 aa10.93□□□□□ -0.66
LRRK1-202ENST00000525284 ZNF236Q9UL36 1845 aa10.93□□□□□ -0.66
LRRK1-202ENST00000525284 E9PLN8 166 aa10.93□□□□□ -0.66
LRRK1-202ENST00000525284 NDUFB8O95169 186 aa10.93□□□□□ -0.66
LRRK1-202ENST00000525284 UBE2AP49459 152 aa10.93□□□□□ -0.66
LRRK1-202ENST00000525284 OPRPNQ99935 248 aaPredicted RBP10.93□□□□□ -0.66
LRRK1-202ENST00000525284 ZNRD1Q9P1U0 126 aa10.93□□□□□ -0.66
LRRK1-202ENST00000525284 SMIM27A0A1W2PRY6 76 aa10.92□□□□□ -0.66
LRRK1-202ENST00000525284 CAMK2N2Q96S95 79 aa10.92□□□□□ -0.66
LRRK1-202ENST00000525284 PLXNA1Q9UIW2 1896 aa10.92□□□□□ -0.66
LRRK1-202ENST00000525284 ARTNQ5T4W7 220 aa10.92□□□□□ -0.66
LRRK1-202ENST00000525284 V9GYV3 84 aa10.92□□□□□ -0.66
LRRK1-202ENST00000525284 TMEM61Q8N0U2 210 aa10.92□□□□□ -0.66
LRRK1-202ENST00000525284 ZMAT4Q9H898 229 aa10.92□□□□□ -0.66
LRRK1-202ENST00000525284 IGLV10-54A0A075B6I4 117 aa10.92□□□□□ -0.66
LRRK1-202ENST00000525284 PRR25Q96S07 402 aa10.92□□□□□ -0.66
LRRK1-202ENST00000525284 HIGD2BQ4VC39 106 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 HIST2H2BCQ6DN03 193 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 Q6ZRM9 215 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 SND1-IT1Q9HBX3 110 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 IGLC1P0CG04 106 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 ZNF581Q9P0T4 197 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 PNRC2Q9NPJ4 139 aaKnown RBP10.91□□□□□ -0.66
LRRK1-202ENST00000525284 COL8A2P25067 703 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 NOP10Q9NPE3 64 aaKnown RBP10.91□□□□□ -0.66
LRRK1-202ENST00000525284 SEC16AO15027 2179 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 TRBV12-3P01733 135 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 UBE2E1P51965 193 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 LINC01356Q8N9X3 169 aa10.91□□□□□ -0.66
LRRK1-202ENST00000525284 G3V318 75 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 HERV-K104P63124 156 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 C3orf22Q8N5N4 141 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 FAM110AQ9BQ89 295 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 FANCMQ8IYD8 2048 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 ZNF134P52741 427 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 SEM1Q6ZVN7 128 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 LYPD6Q86Y78 171 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 TDRD6O60522 2096 aaKnown RBP10.9□□□□□ -0.66
LRRK1-202ENST00000525284 ZC2HC1AQ96GY0 325 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 TRAV26-1A0A087WT03 109 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 CSRP3P50461 194 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 CSRP2Q16527 193 aa10.9□□□□□ -0.66
LRRK1-202ENST00000525284 DEFB125Q8N687 156 aa10.89□□□□□ -0.67
LRRK1-202ENST00000525284 BPESC1Q9GZL8 116 aa10.89□□□□□ -0.67
LRRK1-202ENST00000525284 H0YGX0 51 aa10.89□□□□□ -0.67
LRRK1-202ENST00000525284 J3QRE1 110 aa10.89□□□□□ -0.67
LRRK1-202ENST00000525284 FAM240AA0A1B0GVK7 77 aa10.89□□□□□ -0.67
LRRK1-202ENST00000525284 PDCD11Q14690 1871 aaKnown RBP10.89□□□□□ -0.67
LRRK1-202ENST00000525284 IGKV1D-17A0A075B6S4 117 aa10.89□□□□□ -0.67
LRRK1-202ENST00000525284 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
LRRK1-202ENST00000525284 RHOHQ15669 191 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 DAND5Q8N907 189 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 IGHV4-59P01825 116 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 Q6P435 159 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 PYGO2Q9BRQ0 406 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 RNF144BQ7Z419 303 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 PSME4Q14997 1843 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 TRAV23DV6A0A075B6W5 121 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 E9PQ18 207 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 WFDC2Q14508 124 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 FOXI2Q6ZQN5 318 aa10.88□□□□□ -0.67
LRRK1-202ENST00000525284 MPDZO75970 2070 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 ABCA1O95477 2261 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 C20orf204Q6ZNR8 217 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 MRPL53Q96EL3 112 aaKnown RBP10.87□□□□□ -0.67
LRRK1-202ENST00000525284 GNRH2O43555 120 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 YPEL3P61236 119 aaPredicted RBP10.87□□□□□ -0.67
LRRK1-202ENST00000525284 IGHV3-30P01768 117 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 IGHV3-33P01772 117 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 IGHV3-30-3P0DP02 117 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 IGHV3-30-5P0DP03 117 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 ZFP36L1Q07352 338 aaKnown RBP10.87□□□□□ -0.67
LRRK1-202ENST00000525284 NYNRINQ9P2P1 1898 aaKnown RBP10.87□□□□□ -0.67
LRRK1-202ENST00000525284 SPTBN1Q01082 2364 aaKnown RBP10.87□□□□□ -0.67
LRRK1-202ENST00000525284 C5orf63A6NC05 138 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 NPBQ8NG41 125 aa10.87□□□□□ -0.67
LRRK1-202ENST00000525284 RBAKDNA6NC62 111 aa10.86□□□□□ -0.67
LRRK1-202ENST00000525284 LINC01620Q4KN68 170 aa10.86□□□□□ -0.67
LRRK1-202ENST00000525284 A4D1N5 150 aa10.86□□□□□ -0.67
LRRK1-202ENST00000525284 SPRY2O43597 315 aa10.86□□□□□ -0.67
LRRK1-202ENST00000525284 SPACA3Q8IXA5 215 aa10.86□□□□□ -0.67
LRRK1-202ENST00000525284 LECT2O14960 151 aa10.86□□□□□ -0.67
LRRK1-202ENST00000525284 WISP1O95388 367 aa10.86□□□□□ -0.67
LRRK1-202ENST00000525284 PI4KAP42356 2102 aa10.86□□□□□ -0.67
LRRK1-202ENST00000525284 TEN1Q86WV5 123 aa10.86□□□□□ -0.67
LRRK1-202ENST00000525284 ANK1P16157 1881 aa10.86□□□□□ -0.67
LRRK1-202ENST00000525284 CEP250Q9BV73 2442 aa10.85□□□□□ -0.67
LRRK1-202ENST00000525284 LTAP01374 205 aa10.85□□□□□ -0.67
LRRK1-202ENST00000525284 CLEC2BQ92478 149 aa10.85□□□□□ -0.67
LRRK1-202ENST00000525284 SRSF2Q01130 221 aaKnown RBP10.85□□□□□ -0.67
LRRK1-202ENST00000525284 BRCA1P38398 1863 aaKnown RBP10.85□□□□□ -0.67
LRRK1-202ENST00000525284 USP17L23D6RBM5 183 aa10.85□□□□□ -0.67
LRRK1-202ENST00000525284 TM2D2Q9BX73 214 aa10.85□□□□□ -0.67
LRRK1-202ENST00000525284 MRPL36Q9P0J6 103 aaKnown RBP10.85□□□□□ -0.67
LRRK1-202ENST00000525284 LCTP09848 1927 aa10.85□□□□□ -0.67
LRRK1-202ENST00000525284 DOCK3Q8IZD9 2030 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms