RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 ZNF134P52741 427 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 IGF2BP2-AS1Q96M15 143 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 IGHV1-18A0A0C4DH31 117 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 SRRM5B3KS81 715 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 TMEM178BH3BS89 294 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 ZNF883P0CG24 379 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 NCOA6Q14686 2063 aaPredicted RBP10.03□□□□□ -0.8
EXTL3-214ENST00000523271 COL11A2P13942 1736 aaPredicted RBP10.03□□□□□ -0.8
EXTL3-214ENST00000523271 K7ERJ3 54 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 ITGBL1O95965 494 aaPredicted RBP10.03□□□□□ -0.8
EXTL3-214ENST00000523271 KIR2DL5BA0A0G2JN68 375 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 KIR2DL5BA0A0G2JPC4 375 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 CFC1BP0CG36 223 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 CFC1P0CG37 223 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 RHOHQ15669 191 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 C12orf74Q32Q52 190 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 KIR2DL5AQ8N109 375 aa10.03□□□□□ -0.8
EXTL3-214ENST00000523271 ZCCHC24Q8N2G6 241 aaKnown RBP10.03□□□□□ -0.8
EXTL3-214ENST00000523271 BTCP35070 178 aa10.02□□□□□ -0.8
EXTL3-214ENST00000523271 MRPL51Q4U2R6 128 aaKnown RBP10.02□□□□□ -0.8
EXTL3-214ENST00000523271 ZNF493Q6ZR52 646 aa10.02□□□□□ -0.8
EXTL3-214ENST00000523271 COX7B2Q8TF08 81 aa10.02□□□□□ -0.8
EXTL3-214ENST00000523271 JMJD7-PLA2G4BH0Y9G9 81 aa10.02□□□□□ -0.8
EXTL3-214ENST00000523271 XCL1P47992 114 aa10.02□□□□□ -0.8
EXTL3-214ENST00000523271 PAX9P55771 341 aa10.02□□□□□ -0.8
EXTL3-214ENST00000523271 PRRC2AP48634 2157 aaKnown RBP10.02□□□□□ -0.81
EXTL3-214ENST00000523271 Q6ZVH6 145 aa10.02□□□□□ -0.81
EXTL3-214ENST00000523271 C1QCP02747 245 aa10.02□□□□□ -0.81
EXTL3-214ENST00000523271 NPSP0C0P6 89 aa10.02□□□□□ -0.81
EXTL3-214ENST00000523271 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.81
EXTL3-214ENST00000523271 PLXNB3Q9ULL4 1909 aa10.02□□□□□ -0.81
EXTL3-214ENST00000523271 DYNAPQ8N1N2 210 aa10.02□□□□□ -0.81
EXTL3-214ENST00000523271 FNDC1Q4ZHG4 1894 aaPredicted RBP10.01□□□□□ -0.81
EXTL3-214ENST00000523271 CREBBPQ92793 2442 aa10.01□□□□□ -0.81
EXTL3-214ENST00000523271 NTF4P34130 210 aa10.01□□□□□ -0.81
EXTL3-214ENST00000523271 C8orf49Q96NF6 230 aa10.01□□□□□ -0.81
EXTL3-214ENST00000523271 MRPL35Q9NZE8 188 aaKnown RBP10.01□□□□□ -0.81
EXTL3-214ENST00000523271 GATA4P43694 442 aa10.01□□□□□ -0.81
EXTL3-214ENST00000523271 PRR31Q5SQ13 230 aa10.01□□□□□ -0.81
EXTL3-214ENST00000523271 CLPSL2Q6UWE3 100 aa10.01□□□□□ -0.81
EXTL3-214ENST00000523271 IGKV1D-43A0A0B4J1Z2 117 aa10.01□□□□□ -0.81
EXTL3-214ENST00000523271 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
EXTL3-214ENST00000523271 NLRC5Q86WI3 1866 aa10.01□□□□□ -0.81
EXTL3-214ENST00000523271 FOXE3Q13461 319 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 KLK9Q9UKQ9 250 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 UBE2AP49459 152 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 C10orf55Q5SWW7 151 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 RLFQ13129 1914 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 TMEM213A2RRL7 107 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 SH2D6Q7Z4S9 175 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 EML5Q05BV3 1969 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 H0Y9J4 135 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 PDE6GP18545 87 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 IGHV4-4A0A075B6R2 117 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 IGKV1-39P01597 117 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 IGKV1D-39P04432 117 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 MST1LQ2TV78 715 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 CSRP2Q16527 193 aa10□□□□□ -0.81
EXTL3-214ENST00000523271 DUX4L9Q6RFH8 374 aaPredicted RBP10□□□□□ -0.81
EXTL3-214ENST00000523271 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 OVOL3O00110 214 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 KIAA1549Q9HCM3 1950 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 IGKV3D-7A0A0C4DH55 119 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 LYNX1G3V0Z9 82 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 LYNX1P0DP58 116 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 SP7Q8TDD2 431 aaPredicted RBP9.99□□□□□ -0.81
EXTL3-214ENST00000523271 LYZL4Q96KX0 146 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 Q9H8V8 135 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 TMEM256-PLSCR3K7ERE1 68 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 TIAF1O95411 115 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 HCFC1P51610 2035 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 PLXNA2O75051 1894 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 IGKV1OR2-108A0A075B7D4 117 aa9.99□□□□□ -0.81
EXTL3-214ENST00000523271 ZFP36L1Q07352 338 aaKnown RBP9.99□□□□□ -0.81
EXTL3-214ENST00000523271 IGHV3-38A0A0C4DH36 116 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 RNF183Q96D59 192 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 LTAP01374 205 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 EIF4EBP2Q13542 120 aaPredicted RBP9.98□□□□□ -0.81
EXTL3-214ENST00000523271 SIGLEC8Q9NYZ4 499 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 DENND4CQ5VZ89 1909 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 RIF1Q5UIP0 2472 aaKnown RBP9.98□□□□□ -0.81
EXTL3-214ENST00000523271 LINC00114Q6XXX2 140 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 ICOSQ9Y6W8 199 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 TRAV3A0A0B4J244 114 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 TRBV12-3P01733 135 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 CXCL5P42830 114 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 ANKRD39Q53RE8 183 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 IGFL4Q6B9Z1 124 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 C17orf77Q96MU5 243 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 SAA4P35542 130 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 YPEL3P61236 119 aaPredicted RBP9.98□□□□□ -0.81
EXTL3-214ENST00000523271 C8orf86Q6ZUL3 223 aa9.98□□□□□ -0.81
EXTL3-214ENST00000523271 SHISA3A0PJX4 238 aa9.97□□□□□ -0.81
EXTL3-214ENST00000523271 TRAV26-2A0A0B4J265 109 aa9.97□□□□□ -0.81
EXTL3-214ENST00000523271 FOXF2Q12947 444 aa9.97□□□□□ -0.81
EXTL3-214ENST00000523271 TNS1Q9HBL0 1735 aaKnown RBP9.97□□□□□ -0.81
EXTL3-214ENST00000523271 BRD3OSQ6XYD6 125 aa9.97□□□□□ -0.81
EXTL3-214ENST00000523271 ZNF837Q96EG3 531 aaPredicted RBP9.97□□□□□ -0.81
EXTL3-214ENST00000523271 IGKV1-9A0A0C4DH69 117 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms