RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 PAXXQ9BUH6 204 aa13.8□□□□□ -0.2
PABPC1-217ENST00000521067 CCDC32Q9BV29 185 aa13.8□□□□□ -0.2
PABPC1-217ENST00000521067 MUC21Q5SSG8 566 aa13.79□□□□□ -0.2
PABPC1-217ENST00000521067 WDR61Q9GZS3 305 aaKnown RBP13.79□□□□□ -0.2
PABPC1-217ENST00000521067 PGPEP1Q9NXJ5 209 aa13.79□□□□□ -0.2
PABPC1-217ENST00000521067 SFTA3P0C7M3 94 aa13.78□□□□□ -0.2
PABPC1-217ENST00000521067 XGP55808 180 aa13.78□□□□□ -0.2
PABPC1-217ENST00000521067 SLAQ13239 276 aa13.78□□□□□ -0.2
PABPC1-217ENST00000521067 ZNF479Q96JC4 524 aa13.78□□□□□ -0.2
PABPC1-217ENST00000521067 ARPC5LQ9BPX5 153 aa13.78□□□□□ -0.2
PABPC1-217ENST00000521067 MRPL32Q9BYC8 188 aaKnown RBP13.78□□□□□ -0.2
PABPC1-217ENST00000521067 TRBV7-9A0A0J9YWB2 115 aa13.77□□□□□ -0.21
PABPC1-217ENST00000521067 E5RGE8 158 aa13.77□□□□□ -0.21
PABPC1-217ENST00000521067 DNAH10OSP0CZ25 163 aa13.77□□□□□ -0.21
PABPC1-217ENST00000521067 RANP62826 216 aaKnown RBP13.77□□□□□ -0.21
PABPC1-217ENST00000521067 ZNF266Q14584 549 aa13.77□□□□□ -0.21
PABPC1-217ENST00000521067 MRPL23Q16540 153 aaKnown RBP13.77□□□□□ -0.21
PABPC1-217ENST00000521067 SLC25A31Q9H0C2 315 aa13.77□□□□□ -0.21
PABPC1-217ENST00000521067 ZNF415Q09FC8 603 aa13.76□□□□□ -0.21
PABPC1-217ENST00000521067 LRRC37A5PQ49AS3 106 aa13.76□□□□□ -0.21
PABPC1-217ENST00000521067 NEGR1Q7Z3B1 354 aa13.76□□□□□ -0.21
PABPC1-217ENST00000521067 K7EQD1 137 aa13.75□□□□□ -0.21
PABPC1-217ENST00000521067 ASAH1Q13510 395 aa13.75□□□□□ -0.21
PABPC1-217ENST00000521067 IQCF2Q8IXL9 164 aa13.75□□□□□ -0.21
PABPC1-217ENST00000521067 NMES1Q9C002 83 aa13.75□□□□□ -0.21
PABPC1-217ENST00000521067 MYCBP2O75592 4640 aa13.75□□□□□ -0.21
PABPC1-217ENST00000521067 DNAH8Q96JB1 4490 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 A0A087WTM6 91 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 TRGV4A0A0C4DH28 118 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 RBAKDNA6NC62 111 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 OR7C2O60412 319 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 EIF3GO75821 320 aaKnown RBP eCLIP13.74□□□□□ -0.21
PABPC1-217ENST00000521067 KRTAP10-1P60331 282 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 ERVFC1-1P60608 527 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 MZT2BQ6NZ67 158 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 WFDC10BQ8IUB3 73 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 LYPD1Q8N2G4 141 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 RASL10AQ92737 203 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 NDUFA13Q9P0J0 144 aa13.74□□□□□ -0.21
PABPC1-217ENST00000521067 EPM2AB3EWF7 344 aa13.73□□□□□ -0.21
PABPC1-217ENST00000521067 DIRC3C9JPN6 131 aa13.73□□□□□ -0.21
PABPC1-217ENST00000521067 TMEM183BQ1AE95 376 aa13.73□□□□□ -0.21
PABPC1-217ENST00000521067 Q6AWC8 147 aa13.73□□□□□ -0.21
PABPC1-217ENST00000521067 TMEM183AQ8IXX5 376 aa13.73□□□□□ -0.21
PABPC1-217ENST00000521067 OR10G4Q8NGN3 311 aa13.73□□□□□ -0.21
PABPC1-217ENST00000521067 GYPEP15421 78 aa13.72□□□□□ -0.21
PABPC1-217ENST00000521067 CSN1S1P47710 185 aa13.72□□□□□ -0.21
PABPC1-217ENST00000521067 NFE4Q86UQ8 179 aa13.72□□□□□ -0.21
PABPC1-217ENST00000521067 LY96Q9Y6Y9 160 aa13.72□□□□□ -0.21
PABPC1-217ENST00000521067 EREGO14944 169 aa13.71□□□□□ -0.21
PABPC1-217ENST00000521067 H2BFSP57053 126 aa13.71□□□□□ -0.21
PABPC1-217ENST00000521067 GNRH2O43555 120 aa13.7□□□□□ -0.22
PABPC1-217ENST00000521067 SRIP30626 198 aa13.7□□□□□ -0.22
PABPC1-217ENST00000521067 UBE2L3P68036 154 aaKnown RBP13.7□□□□□ -0.22
PABPC1-217ENST00000521067 IFITM3Q01628 133 aa13.7□□□□□ -0.22
PABPC1-217ENST00000521067 FFAR4Q5NUL3 377 aa13.7□□□□□ -0.22
PABPC1-217ENST00000521067 CDPF1Q6NVV7 123 aa13.7□□□□□ -0.22
PABPC1-217ENST00000521067 ATP5SQ99766 215 aa13.7□□□□□ -0.22
PABPC1-217ENST00000521067 SPXQ9BT56 116 aa13.7□□□□□ -0.22
PABPC1-217ENST00000521067 KCNIP2Q9NS61 270 aa13.7□□□□□ -0.22
PABPC1-217ENST00000521067 TRAV9-2A0A087WT02 112 aa13.69□□□□□ -0.22
PABPC1-217ENST00000521067 LOC100131303A0A0U1RQF7 123 aa13.69□□□□□ -0.22
PABPC1-217ENST00000521067 C17orf112F2Z3M2 114 aa13.69□□□□□ -0.22
PABPC1-217ENST00000521067 FAM159AQ6UWV7 190 aa13.69□□□□□ -0.22
PABPC1-217ENST00000521067 PPP1R1CQ8WVI7 109 aa13.69□□□□□ -0.22
PABPC1-217ENST00000521067 TVP23CQ96ET8 276 aa13.69□□□□□ -0.22
PABPC1-217ENST00000521067 HYLS1Q96M11 299 aa13.69□□□□□ -0.22
PABPC1-217ENST00000521067 MSRB1Q9NZV6 116 aa13.69□□□□□ -0.22
PABPC1-217ENST00000521067 LENEPQ9Y5L5 61 aa13.69□□□□□ -0.22
PABPC1-217ENST00000521067 SRRM2Q9UQ35 2752 aaKnown RBP13.69□□□□□ -0.22
PABPC1-217ENST00000521067 TDRG1Q3Y452 100 aa13.68□□□□□ -0.22
PABPC1-217ENST00000521067 LINC00299Q6ZSB3 139 aa13.68□□□□□ -0.22
PABPC1-217ENST00000521067 ENKURQ8TC29 256 aa13.68□□□□□ -0.22
PABPC1-217ENST00000521067 NAGKQ9UJ70 344 aa13.68□□□□□ -0.22
PABPC1-217ENST00000521067 DMBT1Q9UGM3 2413 aaPredicted RBP13.68□□□□□ -0.22
PABPC1-217ENST00000521067 TRGV11A0A075B6L2 103 aa13.67□□□□□ -0.22
PABPC1-217ENST00000521067 IGHV3-16A0A0C4DH30 117 aa13.67□□□□□ -0.22
PABPC1-217ENST00000521067 PGPA6NDG6 321 aa13.67□□□□□ -0.22
PABPC1-217ENST00000521067 CYCSP99999 105 aaKnown RBP13.67□□□□□ -0.22
PABPC1-217ENST00000521067 TMED6Q8WW62 240 aa13.67□□□□□ -0.22
PABPC1-217ENST00000521067 SMIM3Q9BZL3 60 aa13.67□□□□□ -0.22
PABPC1-217ENST00000521067 PTTG2Q9NZH5 202 aa13.67□□□□□ -0.22
PABPC1-217ENST00000521067 HSPB11Q9Y547 144 aa13.67□□□□□ -0.22
PABPC1-217ENST00000521067 TRAV4A0A0B4J268 109 aa13.66□□□□□ -0.22
PABPC1-217ENST00000521067 ORM1P02763 201 aa13.66□□□□□ -0.22
PABPC1-217ENST00000521067 INAFM2P0DMQ5 153 aa13.66□□□□□ -0.22
PABPC1-217ENST00000521067 EVI2AP22794 236 aa13.66□□□□□ -0.22
PABPC1-217ENST00000521067 PCNPQ8WW12 178 aaKnown RBP13.66□□□□□ -0.22
PABPC1-217ENST00000521067 WFDC1Q9HC57 220 aa13.66□□□□□ -0.22
PABPC1-217ENST00000521067 INMT-MINDY4F8WBC2 141 aa13.65□□□□□ -0.22
PABPC1-217ENST00000521067 K7EP13 123 aa13.65□□□□□ -0.22
PABPC1-217ENST00000521067 UPK1BO75841 260 aa13.65□□□□□ -0.22
PABPC1-217ENST00000521067 MPC2O95563 127 aa13.65□□□□□ -0.22
PABPC1-217ENST00000521067 KHDC3LQ587J8 217 aa13.65□□□□□ -0.22
PABPC1-217ENST00000521067 OR4C5Q8NGB2 326 aa13.65□□□□□ -0.22
PABPC1-217ENST00000521067 S100ZQ8WXG8 99 aa13.65□□□□□ -0.22
PABPC1-217ENST00000521067 OTORQ9NRC9 128 aa13.65□□□□□ -0.22
PABPC1-217ENST00000521067 MBD2Q9UBB5 411 aa13.65□□□□□ -0.22
PABPC1-217ENST00000521067 RPH3ALQ9UNE2 315 aa13.65□□□□□ -0.22
PABPC1-217ENST00000521067 TRAV8-1A0A0A6YYK1 113 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 3429 ms