RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 PRORSD1PA6NEY8 169 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 IFITM5A6NNB3 132 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 UQCRQO14949 82 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 DEGS1O15121 323 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 IGHV3-30P01768 117 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 MT-ND4LP03901 98 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 SLC25A5P05141 298 aaKnown RBP0.48□□□□□ -2.33
SKP1-207ENST00000520417 GYPBP06028 91 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 PAEPP09466 180 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 IGHV3-30-5P0DP03 117 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 IL7P13232 177 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 PCBD1P61457 104 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 RHOHQ15669 191 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 TMEM244Q5VVB8 128 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 CSAG1Q6PB30 78 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 SPATA8Q6RVD6 105 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 IZUMO2Q6UXV1 221 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 IDO2Q6ZQW0 420 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 KRTAP19-3Q7Z4W3 81 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 TAC4Q86UU9 113 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 OR8I2Q8N0Y5 310 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 C10orf111Q8N326 155 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 OR8J3Q8NGG0 315 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 OR5A2Q8NGI9 324 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 CCL19Q99731 98 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 E9PCH4 1651 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 NUP210Q8TEM1 1887 aaPredicted RBP0.48□□□□□ -2.33
SKP1-207ENST00000520417 PEAK1Q9H792 1746 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 TMEM30CPA0ZSE6 113 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 J3KT08 172 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 CDC42EP2O14613 210 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 SMIM24O75264 130 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 DPM2O94777 84 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 TCRAP04437 139 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 SDC4P31431 198 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 FXYD6P3P58550 94 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 RPL37AP61513 92 aaKnown RBP0.47□□□□□ -2.33
SKP1-207ENST00000520417 CCSMST1Q4G0I0 132 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 PLAC4Q8WY50 150 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 BATF3Q9NR55 127 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 SPANXA1Q9NS26 97 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 C19orf12Q9NSK7 152 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 MUC4Q99102 2169 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 DLC1Q96QB1 1528 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 A2MP01023 1474 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 COL1A1P02452 1464 aaPredicted RBP0.47□□□□□ -2.33
SKP1-207ENST00000520417 COL24A1Q17RW2 1714 aa0.47□□□□□ -2.33
SKP1-207ENST00000520417 MYLKQ15746 1914 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 A0A0G2JMM0 328 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 TPST1O60507 370 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 IGKCP01834 107 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 NBEAP1P0C6P0 100 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 HIST1H1BP16401 226 aaKnown RBP0.46□□□□□ -2.34
SKP1-207ENST00000520417 SPINT3P49223 89 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 CAV3P56539 151 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 HSD17B12Q53GQ0 312 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 C6orf52Q5T4I8 152 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 XAF1Q6GPH4 301 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 UNQ5815/PRO19632Q6UWF5 114 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 LYPD5Q6UWN5 251 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 Q6ZS92 163 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 AKAP14Q86UN6 197 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 ATOH7Q8N100 152 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 OTOSQ8NHW6 89 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 NAT14Q8WUY8 206 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 PYDC1Q8WXC3 89 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 AIF1LQ9BQI0 150 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 LPAR5Q9H1C0 372 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 SPANXCQ9NY87 97 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 NCAPD3P42695 1498 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 PTPRDP23468 1912 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 FGD6Q6ZV73 1430 aa0.46□□□□□ -2.34
SKP1-207ENST00000520417 LOC101927531A0A1B0GV80 90 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 HIGD1CA8MV81 97 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 C9JAW5 83 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 TNFSF15O95150 251 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 ZNF137PP52743 207 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 OR8B8Q15620 311 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 ZNF56Q15929 161 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 CCDC153Q494R4 210 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 TCTE3Q8IZS6 198 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 LINC00208Q96KT6 92 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 ATG5Q9H1Y0 275 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 HIGD1AQ9Y241 93 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 PBRM1Q86U86 1689 aa0.45□□□□□ -2.34
SKP1-207ENST00000520417 ZNF462Q96JM2 2506 aa0.44□□□□□ -2.34
SKP1-207ENST00000520417 MDN1Q9NU22 5596 aa0.44□□□□□ -2.34
SKP1-207ENST00000520417 KNTC1P50748 2209 aa0.44□□□□□ -2.34
SKP1-207ENST00000520417 TRAV36DV7A0A075B6V5 113 aa0.44□□□□□ -2.34
SKP1-207ENST00000520417 TRAV17A0A0B4J275 112 aa0.44□□□□□ -2.34
SKP1-207ENST00000520417 PNMA8CA0A1B0GUJ8 204 aa0.44□□□□□ -2.34
SKP1-207ENST00000520417 CCKP06307 115 aa0.44□□□□□ -2.34
SKP1-207ENST00000520417 DBIP07108 87 aaKnown RBP0.44□□□□□ -2.34
SKP1-207ENST00000520417 CCL4P13236 92 aa0.44□□□□□ -2.34
SKP1-207ENST00000520417 EVI2AP22794 236 aa0.44□□□□□ -2.34
SKP1-207ENST00000520417 POLR2JP52435 117 aaKnown RBP0.44□□□□□ -2.34
SKP1-207ENST00000520417 ERBINQ96RT1 1412 aa0.44□□□□□ -2.34
SKP1-207ENST00000520417 MACF1Q9UPN3 7388 aaKnown RBP0.44□□□□□ -2.34
SKP1-207ENST00000520417 NISCHQ9Y2I1 1504 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 BORCS7-ASMTA0A0B4J1R7 106 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms