RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 LMO1P25800 156 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 ZNF503Q96F45 646 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 BPESC1Q9GZL8 116 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 SMKR1H3BMG3 65 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 IGKV1-16P04430 117 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 IGKV2D-24A0A075B6R9 120 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 PRB2P02812 416 aaPredicted RBP9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 SAA4P35542 130 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 HERVK_113P63121 156 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 ABCA7Q8IZY2 2146 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 FAM240AA0A1B0GVK7 77 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 PAX9P55771 341 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 IGFL3Q6UXB1 125 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 C3orf22Q8N5N4 141 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 SHANK2-AS3Q9BTD1 123 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 HIGD1BQ9P298 99 aa9.68□□□□□ -0.86
ERGIC1-208ENST00000520399 RPL18AQ02543 176 aaKnown RBP9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 PRR30Q53SZ7 412 aaPredicted RBP9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 ZNF833PQ6ZTB9 187 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 Q86TA4 180 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 PTPRDP23468 1912 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 SMIM27A0A1W2PRY6 76 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 V9GYV3 84 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 TCF20Q9UGU0 1960 aaKnown RBP9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 A0A0B4J2C4 111 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 A0A0U1RQV1 116 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 DKK1O94907 266 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 XCL2Q9UBD3 114 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 H3BQ85 93 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 LY6HO94772 140 aa9.67□□□□□ -0.86
ERGIC1-208ENST00000520399 IGKV1OR2-108A0A075B7D4 117 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 IGFL4Q6B9Z1 124 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 PRB1P04280 392 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 CFHR2P36980 270 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 PRR31Q5SQ13 230 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 ANGP03950 147 aaKnown RBP9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 ODF1Q14990 250 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 FAM104BQ5XKR9 115 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 Q8N8P6 123 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 FAM110DQ8TAY7 271 aaPredicted RBP9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 TMEM14BQ9NUH8 114 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 NDUFA12Q9UI09 145 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 MLANAQ16655 118 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 PLA2G2CQ5R387 149 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 TMEM75Q8N9X5 138 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 RALGAPA1Q6GYQ0 2036 aa9.66□□□□□ -0.86
ERGIC1-208ENST00000520399 NDUFA7O95182 113 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 WISP1O95388 367 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 UBE2E1P51965 193 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 RUSC1-AS1Q66K80 236 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 FAM231DQ6ZW35 169 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 ZNRF2Q8NHG8 242 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 CENPVL3A0A0U1RRI6 287 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 HLA-DRB4P13762 266 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 TIMM17AQ99595 171 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 ZNRD1Q9P1U0 126 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 HLA-DRB4X5D2U9 266 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 WDR81Q562E7 1941 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 ARMS2P0C7Q2 107 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 WIPF2Q8TF74 440 aaPredicted RBP9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 LINC00479Q96M42 142 aa9.65□□□□□ -0.86
ERGIC1-208ENST00000520399 SHISA2Q6UWI4 295 aa9.65□□□□□ -0.87
ERGIC1-208ENST00000520399 CHD3Q12873 2000 aaKnown RBP9.65□□□□□ -0.87
ERGIC1-208ENST00000520399 PDE6HQ13956 83 aa9.65□□□□□ -0.87
ERGIC1-208ENST00000520399 C17orf58Q2M2W7 97 aa9.65□□□□□ -0.87
ERGIC1-208ENST00000520399 Q6ZR03 302 aa9.65□□□□□ -0.87
ERGIC1-208ENST00000520399 WDR86Q86TI4 376 aa9.65□□□□□ -0.87
ERGIC1-208ENST00000520399 ZNF492Q9P255 531 aa9.65□□□□□ -0.87
ERGIC1-208ENST00000520399 NDUFA4L2Q9NRX3 87 aa9.64□□□□□ -0.87
ERGIC1-208ENST00000520399 IGHV4-28A0A0C4DH34 117 aa9.64□□□□□ -0.87
ERGIC1-208ENST00000520399 NUPR1O60356 82 aa9.64□□□□□ -0.87
ERGIC1-208ENST00000520399 GATA3P23771 443 aa9.64□□□□□ -0.87
ERGIC1-208ENST00000520399 C2orf66Q6UXQ4 117 aa9.64□□□□□ -0.87
ERGIC1-208ENST00000520399 KIAA1671Q9BY89 1806 aa9.64□□□□□ -0.87
ERGIC1-208ENST00000520399 SPTBP11277 2137 aa9.64□□□□□ -0.87
ERGIC1-208ENST00000520399 ZNF503-AS2A6NEH8 195 aa9.64□□□□□ -0.87
ERGIC1-208ENST00000520399 TEX36Q5VZQ5 186 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 IGHV1OR15-1A0A075B7D0 117 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 MSMBP08118 114 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 UBE2AP49459 152 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 LINC01545Q5VT33 79 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 IGF2BP2-AS1Q96M15 143 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 MUSTN1Q8IVN3 82 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 ZNF524Q96C55 264 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 ZNF747Q9BV97 191 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 OVOL3O00110 214 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 ATP6V0E1O15342 81 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 CFC1BP0CG36 223 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 CFC1P0CG37 223 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 CASC2Q6XLA1 102 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 C1orf147Q96MC9 270 aaPredicted RBP9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 KLK9Q9UKQ9 250 aa9.63□□□□□ -0.87
ERGIC1-208ENST00000520399 SP5Q6BEB4 398 aaPredicted RBP9.62□□□□□ -0.87
ERGIC1-208ENST00000520399 CFHR4Q92496 578 aa9.62□□□□□ -0.87
ERGIC1-208ENST00000520399 C9orf47Q6ZRZ4 202 aa9.62□□□□□ -0.87
ERGIC1-208ENST00000520399 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.62□□□□□ -0.87
ERGIC1-208ENST00000520399 CXCL5P42830 114 aa9.62□□□□□ -0.87
ERGIC1-208ENST00000520399 TRAV12-2A0A075B6T6 113 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms