RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TCRAP04437 139 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 PTHLHP12272 177 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 TPT1P13693 172 aaKnown RBP2.02□□□□□ -2.09
VPS13B-207ENST00000518569 NPPCP23582 126 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF80P51504 273 aaPredicted RBP2.02□□□□□ -2.09
VPS13B-207ENST00000518569 LGALS9BQ3B8N2 356 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF705AQ6ZN79 300 aaPredicted RBP2.02□□□□□ -2.09
VPS13B-207ENST00000518569 TMEM91Q6ZNR0 172 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 MIR17HGQ75NE6 70 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 HIST3H2BBQ8N257 126 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 TMEM256Q8N2U0 113 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 MAL2Q969L2 176 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 LINC00526Q96FQ7 95 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 DPH3Q96FX2 82 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 HYLS1Q96M11 299 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 SCGB3A1Q96QR1 104 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 CHCHD7Q9BUK0 85 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 NPCDR1Q9BY65 106 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 OSTCQ9NRP0 149 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 SMCO4Q9NRQ5 59 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 TMEM106BQ9NUM4 274 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF443Q9Y2A4 671 aaPredicted RBP2.02□□□□□ -2.09
VPS13B-207ENST00000518569 MAP1BP46821 2468 aaKnown RBP2.02□□□□□ -2.09
VPS13B-207ENST00000518569 A0A0G2JMZ2 1700 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 ARAP2Q8WZ64 1704 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 COL4A1P02462 1669 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 CHD6Q8TD26 2715 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 DMDP11532 3685 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 DUOX1Q9NRD9 1551 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 EPG5Q9HCE0 2579 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 ATAD5Q96QE3 1844 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 IGHV3-49A0A0A0MS15 119 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 C7orf66A4D0T2 115 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 GRIFINA4D1Z8 144 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 H3BT86 120 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 RPL36A-HNRNPH2H7BZ11 118 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 BPY2O14599 106 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 SYNGR2O43760 224 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 HYPMO75409 117 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 SNCGO76070 127 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 TCL1BO95988 128 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 HBDP02042 147 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 GYPAP02724 150 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 CXCL1P09341 107 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 TRGC1P0CF51 173 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 CRYGAP11844 174 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 SNCAP37840 140 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 POLR2JP52435 117 aaKnown RBP2.01□□□□□ -2.09
VPS13B-207ENST00000518569 FXYD7P58549 80 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 DCDP81605 110 aaKnown RBP2.01□□□□□ -2.09
VPS13B-207ENST00000518569 RPL18Q07020 188 aaKnown RBP2.01□□□□□ -2.09
VPS13B-207ENST00000518569 BSPH1Q075Z2 132 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 DIAPH2-AS1Q14236 149 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 LINC01554Q52M75 96 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 Q6AWC8 147 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 OR2T2Q6IF00 324 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 C7orf65Q6ZTY9 151 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF720Q7Z2F6 126 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 MARCH3Q86UD3 253 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 POP5Q969H6 163 aaKnown RBP2.01□□□□□ -2.09
VPS13B-207ENST00000518569 C18orf15Q96N68 181 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 FGF23Q9GZV9 251 aaPredicted RBP2.01□□□□□ -2.09
VPS13B-207ENST00000518569 AGPAT4-IT1Q9H0P7 198 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 RABAC1Q9UI14 185 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 EPDR1Q9UM22 224 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 RNF11Q9Y3C5 154 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 SERP1Q9Y6X1 66 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 PLXNA3P51805 1871 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 KMT2EQ8IZD2 1858 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 NAV1Q8NEY1 1877 aa2.01□□□□□ -2.09
VPS13B-207ENST00000518569 DCHS1Q96JQ0 3298 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 TPRP12270 2363 aaKnown RBP2□□□□□ -2.09
VPS13B-207ENST00000518569 TET2Q6N021 2002 aaPredicted RBP2□□□□□ -2.09
VPS13B-207ENST00000518569 GCN1Q92616 2671 aaKnown RBP2□□□□□ -2.09
VPS13B-207ENST00000518569 ZFHX2Q9C0A1 2572 aaPredicted RBP2□□□□□ -2.09
VPS13B-207ENST00000518569 CHD8Q9HCK8 2581 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 MYO15AQ9UKN7 3530 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 IGHV3-21A0A0B4J1V1 117 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 IGHV3-72A0A0B4J1Y9 119 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 LOC107986453A0A1B0GWG9 222 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 MCRIP1C9JLW8 97 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 F8W1H4 67 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 H3BQ15 152 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 BUB1B-PAK6H3BSN5 160 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 M0R2P5 195 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 PDCD5O14737 125 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 LYRM1O43325 122 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 SSSCA1O60232 199 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 PROSCO94903 275 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 IGLV3-19P01714 112 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 HLA-DQA1P01909 254 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 APOC3P02656 99 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 IGLC1P0CG04 106 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 CCL5P13501 91 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 NFYAP23511 347 aaPredicted RBP2□□□□□ -2.09
VPS13B-207ENST00000518569 ASIPP42127 132 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 ATP5EP56381 51 aaPredicted RBP2□□□□□ -2.09
VPS13B-207ENST00000518569 NPC2P61916 151 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 SNRPD3P62318 126 aaKnown RBP2□□□□□ -2.09
VPS13B-207ENST00000518569 C12orf73Q69YU5 71 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 1002.4 ms