RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 IGHV3-33P01772 117 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 HIST1H2BJP06899 126 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 INSL3P51460 131 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 TMBIM6P55061 237 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 FOXA3P55318 350 aaPredicted RBP0.41□□□□□ -2.34
SKP1-203ENST00000517625 ARPP19P56211 112 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 RPL19P84098 196 aaKnown RBP0.41□□□□□ -2.34
SKP1-203ENST00000517625 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 C1orf140Q5VVS0 124 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 PAIP2Q9BPZ3 127 aaKnown RBP0.41□□□□□ -2.34
SKP1-203ENST00000517625 GGACTQ9BVM4 153 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 CAMSAP1Q5T5Y3 1602 aa0.41□□□□□ -2.34
SKP1-203ENST00000517625 CSMD3Q7Z407 3707 aa0.4□□□□□ -2.34
SKP1-203ENST00000517625 WIZO95785 1651 aa0.4□□□□□ -2.34
SKP1-203ENST00000517625 NISCHQ9Y2I1 1504 aa0.4□□□□□ -2.35
SKP1-203ENST00000517625 CASP8AP2Q9UKL3 1982 aa0.4□□□□□ -2.35
SKP1-203ENST00000517625 ALKQ9UM73 1620 aa0.4□□□□□ -2.35
SKP1-203ENST00000517625 K7EIL1 84 aa0.4□□□□□ -2.35
SKP1-203ENST00000517625 RER1O15258 196 aa0.4□□□□□ -2.35
SKP1-203ENST00000517625 CIRBPQ14011 172 aaKnown RBP0.4□□□□□ -2.35
SKP1-203ENST00000517625 LINC00299Q6ZSB3 139 aa0.4□□□□□ -2.35
SKP1-203ENST00000517625 GINS3Q9BRX5 216 aa0.4□□□□□ -2.35
SKP1-203ENST00000517625 CHD9Q3L8U1 2897 aa0.4□□□□□ -2.35
SKP1-203ENST00000517625 TET3O43151 1660 aa0.4□□□□□ -2.35
SKP1-203ENST00000517625 PTPRQQ9UMZ3 2332 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 CHD7Q9P2D1 2997 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 PPYP01298 95 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 CXCL1P09341 107 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 PPP1R2P41236 205 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 EIF3IQ13347 325 aaKnown RBP0.39□□□□□ -2.35
SKP1-203ENST00000517625 FKBP1CQ5VVH2 108 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 GLIPR1L1Q6UWM5 242 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 TMEM14EPQ6UXP3 125 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 PLEKHB2Q96CS7 222 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 OR2H1Q9GZK4 316 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 WFDC10AQ9H1F0 79 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 NIT2Q9NQR4 276 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 ASB4Q9Y574 426 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 ACACAQ13085 2346 aa0.39□□□□□ -2.35
SKP1-203ENST00000517625 MAPKBP1O60336 1514 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 EFCAB6Q5THR3 1501 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 TRPM1Q7Z4N2 1603 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 CC2D2AQ9P2K1 1620 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 TJP1Q07157 1748 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 MED12Q93074 2177 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 EML5Q05BV3 1969 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 MYOM1P52179 1685 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 COL4A6Q14031 1691 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 MYCBP2O75592 4640 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 CAMSAP2Q08AD1 1489 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 A0A096LPI6 279 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 RPL35P42766 123 aaKnown RBP0.38□□□□□ -2.35
SKP1-203ENST00000517625 TCTAP57738 103 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 FXYD6P3P58550 94 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 HBBP68871 147 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 KRTAP19-6Q3LI70 58 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 FAM216BQ8N7L0 139 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 AP3S1Q92572 193 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 MCEEQ96PE7 176 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 DLC1Q96QB1 1528 aa0.38□□□□□ -2.35
SKP1-203ENST00000517625 RREB1Q92766 1687 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 FRMPD1Q5SYB0 1578 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 A0A0J9YY99 117 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 A6NN06 94 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 CST7O76096 145 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 IDO1P14902 403 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 BASP1P80723 227 aaKnown RBP0.37□□□□□ -2.35
SKP1-203ENST00000517625 MRPS36P82909 103 aaKnown RBP0.37□□□□□ -2.35
SKP1-203ENST00000517625 RTL8BQ17RB0 113 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 Q6ZS92 163 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 DEFB132Q7Z7B7 95 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 CST11Q9H112 138 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 BOLA2Q9H3K6 86 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 BOKQ9UMX3 212 aaPredicted RBP0.37□□□□□ -2.35
SKP1-203ENST00000517625 LRP1BQ9NZR2 4599 aa0.37□□□□□ -2.35
SKP1-203ENST00000517625 NRKQ7Z2Y5 1582 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 RTL9Q8NET4 1388 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 MYH10P35580 1976 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 SCN8AQ9UQD0 1980 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 FRAS1Q86XX4 4008 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 A0A0D9SG42 100 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 TRBV30A0A0K0K1B3 111 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 H3BQV1 296 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 GNG3P63215 75 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 SNCBQ16143 134 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 FOXI2Q6ZQN5 318 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 LYG2Q86SG7 212 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 CROCCP2Q86T23 111 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 GRPEL2Q8TAA5 225 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 NEK7Q8TDX7 302 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 PLAC8Q9NZF1 115 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 JPT1Q9UK76 154 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 KCPQ6ZWJ8 1503 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 CD109Q6YHK3 1445 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 ERBINQ96RT1 1412 aa0.36□□□□□ -2.35
SKP1-203ENST00000517625 THOC2Q8NI27 1593 aaKnown RBP0.36□□□□□ -2.35
SKP1-203ENST00000517625 CHD1O14646 1710 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 HSPG2P98160 4391 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 TRAV23DV6A0A075B6W5 121 aa0.35□□□□□ -2.35
SKP1-203ENST00000517625 C9orf170A2RU37 121 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms