RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 LHFPL6Q9Y693 200 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 PRRC2BQ5JSZ5 2229 aaKnown RBP2.99□□□□□ -1.93
NEDD4-209ENST00000508871 IGHV4-30-2A0A087WSY4 118 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 H3BVH4 76 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 LST1O00453 97 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 ZNF497Q6ZNH5 498 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 FNDC9Q8TBE3 224 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 CHCHD10Q8WYQ3 142 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-209ENST00000508871 ABCA7Q8IZY2 2146 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 KIAA0100Q14667 2235 aaKnown RBP2.99□□□□□ -1.93
NEDD4-209ENST00000508871 TRANK1O15050 2925 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 IGLV11-55A0A075B6I3 123 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 TRAV4A0A0B4J268 109 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 TMEM223A0PJW6 202 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 RPL36AP83881 106 aaKnown RBP2.99□□□□□ -1.93
NEDD4-209ENST00000508871 KLF9Q13886 244 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-209ENST00000508871 SS18Q15532 418 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 ODF3L2Q3SX64 289 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 RUSC1-AS1Q66K80 236 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 ZIC4Q8N9L1 334 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 SSC4DQ8WTU2 575 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 A0A1B0GXF2 115 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 PIN1P1O15428 100 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 CCL25O15444 150 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 EDDM3BP56851 147 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 LYPD6Q86Y78 171 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 C9orf62Q8N4C0 152 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 DEFB124Q8NES8 71 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 ZC2HC1AQ96GY0 325 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 C19orf24Q9BVV8 132 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 C11orf21Q9P2W6 132 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 NINQ8N4C6 2090 aa2.99□□□□□ -1.93
NEDD4-209ENST00000508871 IGHV3-43DP0DP04 118 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 FAM74A1Q5RGS3 127 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 RALGAPA1Q6GYQ0 2036 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 SVILO95425 2214 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 MPTX1A8MV57 137 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 ATOX1O00244 68 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 IGLV1-44P01699 117 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 LINC01547P58512 204 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-209ENST00000508871 LPAL2Q16609 132 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 PRR30Q53SZ7 412 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-209ENST00000508871 LYZL2Q7Z4W2 148 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 TMEM133Q9H2Q1 129 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 TRAV2A0A0B4J234 112 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 FOXA3P55318 350 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-209ENST00000508871 ATP5EP56381 51 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-209ENST00000508871 FAM120AOSQ5T036 256 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 ZNF329Q86UD4 541 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 CNEP1R1Q8N9A8 125 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 VSTM2AQ8TAG5 236 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 ITLN2Q8WWU7 325 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-209ENST00000508871 AQP3Q92482 292 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 ARL2-SNX15V9GYD0 113 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 PINLYPA6NC86 204 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 FSHBP01225 129 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 QRFPP83859 136 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 MORN2Q502X0 79 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 C16orf47Q6ZP98 133 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-209ENST00000508871 TOMM5Q8N4H5 51 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 ZNRF1Q8ND25 227 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 CLCF1Q9UBD9 225 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 SDK2Q58EX2 2172 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 ARHGAP21Q5T5U3 1957 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 F8W1H4 67 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 Q6ZUT4 128 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 C3orf22Q8N5N4 141 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 NUP35Q8NFH5 326 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 MUCL1Q96DR8 90 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 RNF7Q9UBF6 113 aa2.98□□□□□ -1.93
NEDD4-209ENST00000508871 TRGV5A0A0B4J1U4 118 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 TFF1P04155 84 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 PTHLHP12272 177 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 LY6DQ14210 128 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 C9orf66Q5T8R8 295 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 SERP1Q9Y6X1 66 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 PCNTO95613 3336 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 DNAH12Q6ZR08 3092 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 IGKV1D-43A0A0B4J1Z2 117 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 IGHV3-38A0A0C4DH36 116 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 SNRPGP15A8MWD9 76 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 UMAD1C9J7I0 102 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 MRPL33O75394 65 aaKnown RBP2.97□□□□□ -1.93
NEDD4-209ENST00000508871 ZNF345Q14585 488 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 C3orf56Q8N813 242 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 C10orf105Q8TEF2 133 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 TRAV23DV6A0A075B6W5 121 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 TRAV14DV4A0A0A6YYC5 116 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 MSMBP08118 114 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 PSG9Q00887 426 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 CEMP1Q6PRD7 247 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-209ENST00000508871 CYB561D1Q8N8Q1 229 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 FDCSPQ8NFU4 85 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 AMELYQ99218 206 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 RABAC1Q9UI14 185 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 POLEQ07864 2286 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 A0A1B0GW54 56 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 TMEM14DPA8MWL7 114 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 CAV3P56539 151 aa2.97□□□□□ -1.93
NEDD4-209ENST00000508871 SPANXN1Q5VSR9 72 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms